Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
Scaf4Q6PFF0 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Scaf4Q6PFF0 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Scaf4Q6PFF0 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC3.9□□□□□ -1.78
Scaf4Q6PFF0 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC3.9□□□□□ -1.79
Scaf4Q6PFF0 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Scaf4Q6PFF0 Gm22496-201ENSMUST00000104493 88 ntBASIC3.9□□□□□ -1.79
Scaf4Q6PFF0 Gm13831-201ENSMUST00000118764 302 ntBASIC3.9□□□□□ -1.79
Scaf4Q6PFF0 Gm11785-201ENSMUST00000120165 601 ntBASIC3.9□□□□□ -1.79
Scaf4Q6PFF0 Gm23789-201ENSMUST00000122536 301 ntBASIC3.9□□□□□ -1.79
Scaf4Q6PFF0 Gm24014-201ENSMUST00000157728 157 ntBASIC3.9□□□□□ -1.79
Scaf4Q6PFF0 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.9□□□□□ -1.79
Scaf4Q6PFF0 Gm25175-201ENSMUST00000178712 79 ntBASIC3.9□□□□□ -1.79
Scaf4Q6PFF0 Mir6537-201ENSMUST00000184150 110 ntBASIC3.9□□□□□ -1.79
Scaf4Q6PFF0 Gm5329-201ENSMUST00000186898 463 ntBASIC3.9□□□□□ -1.79
Scaf4Q6PFF0 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC3.9□□□□□ -1.79
Scaf4Q6PFF0 Gm4248-201ENSMUST00000196905 316 ntBASIC3.9□□□□□ -1.79
Scaf4Q6PFF0 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC3.9□□□□□ -1.79
Scaf4Q6PFF0 AC154994.1-201ENSMUST00000217395 302 ntBASIC3.9□□□□□ -1.79
Scaf4Q6PFF0 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC3.9□□□□□ -1.79
Scaf4Q6PFF0 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Scaf4Q6PFF0 AC121997.2-203ENSMUST00000228613 4192 ntBASIC3.9□□□□□ -1.79
Scaf4Q6PFF0 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Scaf4Q6PFF0 Gm3972-201ENSMUST00000173960 2861 ntBASIC3.9□□□□□ -1.79
Scaf4Q6PFF0 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Scaf4Q6PFF0 Gm28634-201ENSMUST00000191087 2613 ntBASIC3.9□□□□□ -1.79
Scaf4Q6PFF0 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.89□□□□□ -1.79
Scaf4Q6PFF0 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Scaf4Q6PFF0 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Scaf4Q6PFF0 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.89□□□□□ -1.79
Scaf4Q6PFF0 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.89□□□□□ -1.79
Scaf4Q6PFF0 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
Scaf4Q6PFF0 AC115047.2-201ENSMUST00000214421 1848 ntBASIC3.89□□□□□ -1.79
Scaf4Q6PFF0 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Scaf4Q6PFF0 Gm26500-201ENSMUST00000101867 106 ntBASIC3.89□□□□□ -1.79
Scaf4Q6PFF0 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Scaf4Q6PFF0 Gm23697-201ENSMUST00000103897 110 ntBASIC3.89□□□□□ -1.79
Scaf4Q6PFF0 Gm26387-201ENSMUST00000104238 132 ntBASIC3.89□□□□□ -1.79
Scaf4Q6PFF0 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Scaf4Q6PFF0 Gm13155-201ENSMUST00000119277 646 ntBASIC3.89□□□□□ -1.79
Scaf4Q6PFF0 Gm8178-201ENSMUST00000121570 646 ntBASIC3.89□□□□□ -1.79
Scaf4Q6PFF0 Gm13419-201ENSMUST00000121711 271 ntBASIC3.89□□□□□ -1.79
Scaf4Q6PFF0 Gm14473-201ENSMUST00000122269 557 ntBASIC3.89□□□□□ -1.79
Scaf4Q6PFF0 Gm25321-201ENSMUST00000122558 102 ntBASIC3.89□□□□□ -1.79
Scaf4Q6PFF0 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC3.89□□□□□ -1.79
Scaf4Q6PFF0 Gm23905-201ENSMUST00000157568 109 ntBASIC3.89□□□□□ -1.79
Scaf4Q6PFF0 Gm24005-201ENSMUST00000158459 296 ntBASIC3.89□□□□□ -1.79
Scaf4Q6PFF0 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC3.89□□□□□ -1.79
Scaf4Q6PFF0 Gm25121-201ENSMUST00000179846 79 ntBASIC3.89□□□□□ -1.79
Scaf4Q6PFF0 Gm27476-201ENSMUST00000183366 104 ntBASIC3.89□□□□□ -1.79
Scaf4Q6PFF0 Mir7031-201ENSMUST00000183860 65 ntBASIC3.89□□□□□ -1.79
Scaf4Q6PFF0 Gm28849-201ENSMUST00000188127 174 ntBASIC3.89□□□□□ -1.79
Scaf4Q6PFF0 Gm28330-201ENSMUST00000190353 171 ntBASIC3.89□□□□□ -1.79
Scaf4Q6PFF0 Gm20203-201ENSMUST00000192352 332 ntBASIC3.89□□□□□ -1.79
Scaf4Q6PFF0 Gm42623-201ENSMUST00000197225 379 ntBASIC3.89□□□□□ -1.79
Scaf4Q6PFF0 AC174780.1-201ENSMUST00000199415 1107 ntBASIC3.89□□□□□ -1.79
Scaf4Q6PFF0 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.89□□□□□ -1.79
Scaf4Q6PFF0 Gm44887-201ENSMUST00000208980 178 ntBASIC3.89□□□□□ -1.79
Scaf4Q6PFF0 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC3.89□□□□□ -1.79
Scaf4Q6PFF0 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Scaf4Q6PFF0 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
Scaf4Q6PFF0 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Scaf4Q6PFF0 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.89□□□□□ -1.79
Scaf4Q6PFF0 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
Scaf4Q6PFF0 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Scaf4Q6PFF0 Gm44434-201ENSMUST00000203918 3745 ntBASIC3.88□□□□□ -1.79
Scaf4Q6PFF0 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Scaf4Q6PFF0 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Scaf4Q6PFF0 AC167360.1-201ENSMUST00000222596 2494 ntBASIC3.88□□□□□ -1.79
Scaf4Q6PFF0 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Scaf4Q6PFF0 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Scaf4Q6PFF0 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Scaf4Q6PFF0 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Scaf4Q6PFF0 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Scaf4Q6PFF0 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Scaf4Q6PFF0 Gm13714-201ENSMUST00000117313 221 ntBASIC3.88□□□□□ -1.79
Scaf4Q6PFF0 Gm13581-201ENSMUST00000120675 278 ntBASIC3.88□□□□□ -1.79
Scaf4Q6PFF0 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Scaf4Q6PFF0 Gm24006-201ENSMUST00000158462 132 ntBASIC3.88□□□□□ -1.79
Scaf4Q6PFF0 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.88□□□□□ -1.79
Scaf4Q6PFF0 Gm20542-201ENSMUST00000174582 372 ntBASIC3.88□□□□□ -1.79
Scaf4Q6PFF0 Gm25071-201ENSMUST00000175232 70 ntBASIC3.88□□□□□ -1.79
Scaf4Q6PFF0 Spin2g-201ENSMUST00000178425 687 ntBASIC3.88□□□□□ -1.79
Scaf4Q6PFF0 Mir6963-201ENSMUST00000183535 71 ntBASIC3.88□□□□□ -1.79
Scaf4Q6PFF0 Mir6391-201ENSMUST00000184391 104 ntBASIC3.88□□□□□ -1.79
Scaf4Q6PFF0 Gm27733-201ENSMUST00000184803 68 ntBASIC3.88□□□□□ -1.79
Scaf4Q6PFF0 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Scaf4Q6PFF0 Gm29479-201ENSMUST00000190352 455 ntBASIC3.88□□□□□ -1.79
Scaf4Q6PFF0 Gm37162-201ENSMUST00000191708 551 ntBASIC3.88□□□□□ -1.79
Scaf4Q6PFF0 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Scaf4Q6PFF0 Gm43529-201ENSMUST00000199178 412 ntBASIC3.88□□□□□ -1.79
Scaf4Q6PFF0 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC3.88□□□□□ -1.79
Scaf4Q6PFF0 Gm44703-201ENSMUST00000205724 248 ntBASIC3.88□□□□□ -1.79
Scaf4Q6PFF0 Gm5002-201ENSMUST00000207145 223 ntBASIC3.88□□□□□ -1.79
Scaf4Q6PFF0 AC188459.1-201ENSMUST00000216651 300 ntBASIC3.88□□□□□ -1.79
Scaf4Q6PFF0 Mir32-201ENSMUST00000083610 70 ntBASIC3.88□□□□□ -1.79
Scaf4Q6PFF0 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
Scaf4Q6PFF0 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.88□□□□□ -1.79
Scaf4Q6PFF0 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
Scaf4Q6PFF0 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms