Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Gm7916-201ENSMUST00000120325 456 ntBASIC2.9□□□□□ -1.95
Hmgb4Q6P8W9 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC2.9□□□□□ -1.95
Hmgb4Q6P8W9 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC2.9□□□□□ -1.95
Hmgb4Q6P8W9 Gm25153-201ENSMUST00000157118 156 ntBASIC2.9□□□□□ -1.95
Hmgb4Q6P8W9 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC2.9□□□□□ -1.95
Hmgb4Q6P8W9 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC2.9□□□□□ -1.95
Hmgb4Q6P8W9 Mir3076-201ENSMUST00000175415 60 ntBASIC2.9□□□□□ -1.95
Hmgb4Q6P8W9 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.9□□□□□ -1.95
Hmgb4Q6P8W9 Gm23128-202ENSMUST00000196578 133 ntBASIC2.9□□□□□ -1.95
Hmgb4Q6P8W9 Gm9236-201ENSMUST00000196892 587 ntBASIC2.9□□□□□ -1.95
Hmgb4Q6P8W9 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC2.9□□□□□ -1.95
Hmgb4Q6P8W9 Gm44256-201ENSMUST00000203304 335 ntBASIC2.9□□□□□ -1.95
Hmgb4Q6P8W9 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC2.9□□□□□ -1.95
Hmgb4Q6P8W9 Gm45427-201ENSMUST00000209572 1253 ntBASIC2.9□□□□□ -1.95
Hmgb4Q6P8W9 CT030662.1-201ENSMUST00000227380 232 ntBASIC2.9□□□□□ -1.95
Hmgb4Q6P8W9 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Hmgb4Q6P8W9 Gm26263-201ENSMUST00000083281 164 ntBASIC2.9□□□□□ -1.95
Hmgb4Q6P8W9 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Hmgb4Q6P8W9 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
Hmgb4Q6P8W9 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Hmgb4Q6P8W9 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Hmgb4Q6P8W9 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Hmgb4Q6P8W9 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Hmgb4Q6P8W9 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Hmgb4Q6P8W9 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Hmgb4Q6P8W9 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Hmgb4Q6P8W9 Gm11221-201ENSMUST00000117230 597 ntBASIC2.89□□□□□ -1.95
Hmgb4Q6P8W9 Gm12386-201ENSMUST00000117380 688 ntBASIC2.89□□□□□ -1.95
Hmgb4Q6P8W9 Gm14558-201ENSMUST00000117458 381 ntBASIC2.89□□□□□ -1.95
Hmgb4Q6P8W9 Gm11522-201ENSMUST00000120533 176 ntBASIC2.89□□□□□ -1.95
Hmgb4Q6P8W9 Gm23429-201ENSMUST00000122486 149 ntBASIC2.89□□□□□ -1.95
Hmgb4Q6P8W9 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC2.89□□□□□ -1.95
Hmgb4Q6P8W9 Gm24546-201ENSMUST00000158652 102 ntBASIC2.89□□□□□ -1.95
Hmgb4Q6P8W9 Gm24736-201ENSMUST00000158862 130 ntBASIC2.89□□□□□ -1.95
Hmgb4Q6P8W9 Gm9071-201ENSMUST00000165915 474 ntBASIC2.89□□□□□ -1.95
Hmgb4Q6P8W9 Gm3104-201ENSMUST00000171004 473 ntBASIC2.89□□□□□ -1.95
Hmgb4Q6P8W9 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC2.89□□□□□ -1.95
Hmgb4Q6P8W9 Mir6341-201ENSMUST00000183490 121 ntBASIC2.89□□□□□ -1.95
Hmgb4Q6P8W9 Gm27379-201ENSMUST00000183730 123 ntBASIC2.89□□□□□ -1.95
Hmgb4Q6P8W9 Mir6335-201ENSMUST00000184081 98 ntBASIC2.89□□□□□ -1.95
Hmgb4Q6P8W9 Mir6371-201ENSMUST00000184470 111 ntBASIC2.89□□□□□ -1.95
Hmgb4Q6P8W9 Gm27608-201ENSMUST00000184822 162 ntBASIC2.89□□□□□ -1.95
Hmgb4Q6P8W9 Ighv12-1-201ENSMUST00000195542 329 ntBASIC2.89□□□□□ -1.95
Hmgb4Q6P8W9 Igkv15-97-201ENSMUST00000197637 339 ntBASIC2.89□□□□□ -1.95
Hmgb4Q6P8W9 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC2.89□□□□□ -1.95
Hmgb4Q6P8W9 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC2.89□□□□□ -1.95
Hmgb4Q6P8W9 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC2.89□□□□□ -1.95
Hmgb4Q6P8W9 AC160984.2-201ENSMUST00000224927 791 ntBASIC2.89□□□□□ -1.95
Hmgb4Q6P8W9 AC129202.2-201ENSMUST00000225123 177 ntBASIC2.89□□□□□ -1.95
Hmgb4Q6P8W9 AC124524.1-201ENSMUST00000225833 181 ntBASIC2.89□□□□□ -1.95
Hmgb4Q6P8W9 Ear14-201ENSMUST00000049559 468 ntBASIC2.89□□□□□ -1.95
Hmgb4Q6P8W9 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Hmgb4Q6P8W9 Gm25853-201ENSMUST00000082793 132 ntBASIC2.89□□□□□ -1.95
Hmgb4Q6P8W9 Gm24045-201ENSMUST00000083113 98 ntBASIC2.89□□□□□ -1.95
Hmgb4Q6P8W9 Mir208a-201ENSMUST00000083498 83 ntBASIC2.89□□□□□ -1.95
Hmgb4Q6P8W9 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC2.89□□□□□ -1.95
Hmgb4Q6P8W9 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Hmgb4Q6P8W9 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Hmgb4Q6P8W9 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Hmgb4Q6P8W9 AC163660.3-201ENSMUST00000224253 1563 ntBASIC2.88□□□□□ -1.95
Hmgb4Q6P8W9 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC2.88□□□□□ -1.95
Hmgb4Q6P8W9 Gm11356-201ENSMUST00000118974 192 ntBASIC2.88□□□□□ -1.95
Hmgb4Q6P8W9 Gm14736-201ENSMUST00000121470 336 ntBASIC2.88□□□□□ -1.95
Hmgb4Q6P8W9 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.88□□□□□ -1.95
Hmgb4Q6P8W9 Gm13901-201ENSMUST00000137252 468 ntBASIC2.88□□□□□ -1.95
Hmgb4Q6P8W9 Gm22500-201ENSMUST00000158982 99 ntBASIC2.88□□□□□ -1.95
Hmgb4Q6P8W9 Gm23963-201ENSMUST00000179603 77 ntBASIC2.88□□□□□ -1.95
Hmgb4Q6P8W9 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC2.88□□□□□ -1.95
Hmgb4Q6P8W9 Gm27490-201ENSMUST00000184754 128 ntBASIC2.88□□□□□ -1.95
Hmgb4Q6P8W9 Gm29429-201ENSMUST00000187071 121 ntBASIC2.88□□□□□ -1.95
Hmgb4Q6P8W9 Gm9227-201ENSMUST00000194733 566 ntBASIC2.88□□□□□ -1.95
Hmgb4Q6P8W9 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.88□□□□□ -1.95
Hmgb4Q6P8W9 Gm19252-201ENSMUST00000204705 305 ntBASIC2.88□□□□□ -1.95
Hmgb4Q6P8W9 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC2.88□□□□□ -1.95
Hmgb4Q6P8W9 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.88□□□□□ -1.95
Hmgb4Q6P8W9 AC158803.1-201ENSMUST00000219495 316 ntBASIC2.88□□□□□ -1.95
Hmgb4Q6P8W9 AC162857.1-201ENSMUST00000226614 400 ntBASIC2.88□□□□□ -1.95
Hmgb4Q6P8W9 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Hmgb4Q6P8W9 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Hmgb4Q6P8W9 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Hmgb4Q6P8W9 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Hmgb4Q6P8W9 Gm22247-201ENSMUST00000082476 131 ntBASIC2.88□□□□□ -1.95
Hmgb4Q6P8W9 Mir137-201ENSMUST00000083635 73 ntBASIC2.88□□□□□ -1.95
Hmgb4Q6P8W9 Snord7-201ENSMUST00000083781 97 ntBASIC2.88□□□□□ -1.95
Hmgb4Q6P8W9 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Hmgb4Q6P8W9 Gm43326-201ENSMUST00000198459 1638 ntBASIC2.88□□□□□ -1.95
Hmgb4Q6P8W9 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Hmgb4Q6P8W9 Gm43256-201ENSMUST00000199995 3091 ntBASIC2.88□□□□□ -1.95
Hmgb4Q6P8W9 Gm44821-201ENSMUST00000208212 2002 ntBASIC2.88□□□□□ -1.95
Hmgb4Q6P8W9 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Hmgb4Q6P8W9 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
Hmgb4Q6P8W9 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Hmgb4Q6P8W9 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Hmgb4Q6P8W9 Gm14448-201ENSMUST00000116383 210 ntBASIC2.87□□□□□ -1.95
Hmgb4Q6P8W9 Gm9850-201ENSMUST00000117916 227 ntBASIC2.87□□□□□ -1.95
Hmgb4Q6P8W9 Gm12697-201ENSMUST00000118008 667 ntBASIC2.87□□□□□ -1.95
Hmgb4Q6P8W9 Gm14020-201ENSMUST00000118165 662 ntBASIC2.87□□□□□ -1.95
Hmgb4Q6P8W9 Gm23895-201ENSMUST00000158108 160 ntBASIC2.87□□□□□ -1.95
Hmgb4Q6P8W9 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC2.87□□□□□ -1.95
Hmgb4Q6P8W9 Gm24168-201ENSMUST00000178825 107 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms