Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC0.64□□□□□ -2.31
Col7a1Q63870 Gm11359-201ENSMUST00000120039 567 ntBASIC0.64□□□□□ -2.31
Col7a1Q63870 Gm13903-201ENSMUST00000120945 193 ntBASIC0.64□□□□□ -2.31
Col7a1Q63870 Gm22603-201ENSMUST00000157603 96 ntBASIC0.64□□□□□ -2.31
Col7a1Q63870 Gm3867-201ENSMUST00000086108 279 ntBASIC0.64□□□□□ -2.31
Col7a1Q63870 Gm16129-201ENSMUST00000152628 486 ntBASIC0.64□□□□□ -2.31
Col7a1Q63870 Gm22817-201ENSMUST00000157448 356 ntBASIC0.64□□□□□ -2.31
Col7a1Q63870 Gm23190-201ENSMUST00000180307 64 ntBASIC0.64□□□□□ -2.31
Col7a1Q63870 Gm27698-201ENSMUST00000184060 249 ntBASIC0.64□□□□□ -2.31
Col7a1Q63870 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC0.64□□□□□ -2.31
Col7a1Q63870 Gm26064-201ENSMUST00000083381 109 ntBASIC0.64□□□□□ -2.31
Col7a1Q63870 Gm14894-201ENSMUST00000117170 270 ntBASIC0.63□□□□□ -2.31
Col7a1Q63870 Gm37449-201ENSMUST00000193016 270 ntBASIC0.63□□□□□ -2.31
Col7a1Q63870 Gm33354-201ENSMUST00000195448 906 ntBASIC0.63□□□□□ -2.31
Col7a1Q63870 Gm18658-201ENSMUST00000195558 270 ntBASIC0.63□□□□□ -2.31
Col7a1Q63870 Mir6896-201ENSMUST00000198033 73 ntBASIC0.63□□□□□ -2.31
Col7a1Q63870 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC0.63□□□□□ -2.31
Col7a1Q63870 Gm44845-201ENSMUST00000208773 335 ntBASIC0.63□□□□□ -2.31
Col7a1Q63870 AC132121.1-201ENSMUST00000220774 332 ntBASIC0.63□□□□□ -2.31
Col7a1Q63870 AC132954.1-201ENSMUST00000221017 342 ntBASIC0.63□□□□□ -2.31
Col7a1Q63870 Gm23531-201ENSMUST00000104567 68 ntBASIC0.63□□□□□ -2.31
Col7a1Q63870 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC0.63□□□□□ -2.31
Col7a1Q63870 Gm24895-201ENSMUST00000122742 74 ntBASIC0.63□□□□□ -2.31
Col7a1Q63870 Gm25150-201ENSMUST00000157121 60 ntBASIC0.63□□□□□ -2.31
Col7a1Q63870 Gm27265-201ENSMUST00000183559 77 ntBASIC0.63□□□□□ -2.31
Col7a1Q63870 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC0.63□□□□□ -2.31
Col7a1Q63870 Gm44059-201ENSMUST00000204048 351 ntBASIC0.63□□□□□ -2.31
Col7a1Q63870 Gm45636-201ENSMUST00000210497 1064 ntBASIC0.63□□□□□ -2.31
Col7a1Q63870 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
Col7a1Q63870 Gm15067-201ENSMUST00000119534 156 ntBASIC0.62□□□□□ -2.31
Col7a1Q63870 Gm14840-201ENSMUST00000122135 594 ntBASIC0.62□□□□□ -2.31
Col7a1Q63870 Gm15147-201ENSMUST00000122263 483 ntBASIC0.62□□□□□ -2.31
Col7a1Q63870 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
Col7a1Q63870 Gm23036-201ENSMUST00000157885 99 ntBASIC0.62□□□□□ -2.31
Col7a1Q63870 Gm26378-201ENSMUST00000179093 107 ntBASIC0.62□□□□□ -2.31
Col7a1Q63870 Gm27974-201ENSMUST00000183415 105 ntBASIC0.62□□□□□ -2.31
Col7a1Q63870 Igkv1-136-201ENSMUST00000200635 297 ntBASIC0.62□□□□□ -2.31
Col7a1Q63870 Gm22454-201ENSMUST00000082583 107 ntBASIC0.62□□□□□ -2.31
Col7a1Q63870 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC0.62□□□□□ -2.31
Col7a1Q63870 Gm16265-201ENSMUST00000134558 108 ntBASIC0.62□□□□□ -2.31
Col7a1Q63870 Gm13901-201ENSMUST00000137252 468 ntBASIC0.62□□□□□ -2.31
Col7a1Q63870 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC0.62□□□□□ -2.31
Col7a1Q63870 Gm22646-201ENSMUST00000175130 115 ntBASIC0.62□□□□□ -2.31
Col7a1Q63870 Mir5099-201ENSMUST00000175257 74 ntBASIC0.62□□□□□ -2.31
Col7a1Q63870 Mir6915-201ENSMUST00000198839 69 ntBASIC0.62□□□□□ -2.31
Col7a1Q63870 Gm11351-202ENSMUST00000225724 478 ntBASIC0.62□□□□□ -2.31
Col7a1Q63870 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC0.62□□□□□ -2.31
Col7a1Q63870 Gm23623-201ENSMUST00000082461 107 ntBASIC0.62□□□□□ -2.31
Col7a1Q63870 Gm12731-201ENSMUST00000120932 268 ntBASIC0.61□□□□□ -2.31
Col7a1Q63870 Gm22839-201ENSMUST00000158436 304 ntBASIC0.61□□□□□ -2.31
Col7a1Q63870 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.61□□□□□ -2.31
Col7a1Q63870 Gm28169-201ENSMUST00000190342 345 ntBASIC0.61□□□□□ -2.31
Col7a1Q63870 Gm43991-201ENSMUST00000203751 274 ntBASIC0.61□□□□□ -2.31
Col7a1Q63870 Gm15095-201ENSMUST00000118996 1430 ntBASIC0.61□□□□□ -2.31
Col7a1Q63870 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
Col7a1Q63870 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC0.61□□□□□ -2.31
Col7a1Q63870 Gm24551-201ENSMUST00000158645 92 ntBASIC0.61□□□□□ -2.31
Col7a1Q63870 Gm27511-201ENSMUST00000183502 127 ntBASIC0.61□□□□□ -2.31
Col7a1Q63870 Gm38329-201ENSMUST00000193473 427 ntBASIC0.61□□□□□ -2.31
Col7a1Q63870 Gm36974-201ENSMUST00000194200 1071 ntBASIC0.61□□□□□ -2.31
Col7a1Q63870 CT030170.3-201ENSMUST00000221205 1815 ntBASIC0.61□□□□□ -2.31
Col7a1Q63870 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
Col7a1Q63870 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC0.61□□□□□ -2.31
Col7a1Q63870 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC0.61□□□□□ -2.31
Col7a1Q63870 Anp32-ps-201ENSMUST00000118265 388 ntBASIC0.61□□□□□ -2.31
Col7a1Q63870 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC0.61□□□□□ -2.31
Col7a1Q63870 Gm22163-201ENSMUST00000158408 135 ntBASIC0.61□□□□□ -2.31
Col7a1Q63870 Gm27028-201ENSMUST00000182303 399 ntBASIC0.61□□□□□ -2.31
Col7a1Q63870 Gm28688-201ENSMUST00000187301 268 ntBASIC0.61□□□□□ -2.31
Col7a1Q63870 Gm28647-201ENSMUST00000188416 197 ntBASIC0.61□□□□□ -2.31
Col7a1Q63870 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC0.61□□□□□ -2.31
Col7a1Q63870 Gm7726-201ENSMUST00000206241 231 ntBASIC0.61□□□□□ -2.31
Col7a1Q63870 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC0.6□□□□□ -2.31
Col7a1Q63870 Gm12327-201ENSMUST00000121729 1168 ntBASIC0.6□□□□□ -2.31
Col7a1Q63870 Gm18416-201ENSMUST00000175635 1003 ntBASIC0.6□□□□□ -2.31
Col7a1Q63870 Gm23144-201ENSMUST00000180226 107 ntBASIC0.6□□□□□ -2.31
Col7a1Q63870 Gm19563-201ENSMUST00000222031 270 ntBASIC0.6□□□□□ -2.31
Col7a1Q63870 AC154271.1-201ENSMUST00000224780 383 ntBASIC0.6□□□□□ -2.31
Col7a1Q63870 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
Col7a1Q63870 Gm21809-201ENSMUST00000178495 468 ntBASIC0.6□□□□□ -2.31
Col7a1Q63870 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC0.6□□□□□ -2.31
Col7a1Q63870 Gm38231-201ENSMUST00000192030 347 ntBASIC0.6□□□□□ -2.31
Col7a1Q63870 Mir191-201ENSMUST00000196210 74 ntBASIC0.6□□□□□ -2.31
Col7a1Q63870 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC0.6□□□□□ -2.31
Col7a1Q63870 AC069074.1-201ENSMUST00000220048 381 ntBASIC0.6□□□□□ -2.31
Col7a1Q63870 Gm18338-201ENSMUST00000222381 560 ntBASIC0.6□□□□□ -2.31
Col7a1Q63870 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
Col7a1Q63870 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
Col7a1Q63870 Gm12238-201ENSMUST00000127764 124 ntBASIC0.59□□□□□ -2.31
Col7a1Q63870 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
Col7a1Q63870 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC0.59□□□□□ -2.31
Col7a1Q63870 AC124524.1-201ENSMUST00000225833 181 ntBASIC0.59□□□□□ -2.31
Col7a1Q63870 Gm25697-201ENSMUST00000082902 98 ntBASIC0.59□□□□□ -2.31
Col7a1Q63870 AC121844.2-201ENSMUST00000219067 2066 ntBASIC0.59□□□□□ -2.31
Col7a1Q63870 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC0.59□□□□□ -2.32
Col7a1Q63870 Gm11386-201ENSMUST00000117761 347 ntBASIC0.59□□□□□ -2.32
Col7a1Q63870 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC0.59□□□□□ -2.32
Col7a1Q63870 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC0.59□□□□□ -2.32
Col7a1Q63870 Ighv12-1-201ENSMUST00000195542 329 ntBASIC0.59□□□□□ -2.32
Col7a1Q63870 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC0.59□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms