Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Gm14841-201ENSMUST00000121067 758 ntBASIC3.13□□□□□ -1.91
Trim27Q62158 Gm14629-201ENSMUST00000122428 144 ntBASIC3.13□□□□□ -1.91
Trim27Q62158 Gm13368-201ENSMUST00000122443 430 ntBASIC3.13□□□□□ -1.91
Trim27Q62158 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
Trim27Q62158 Gm24546-201ENSMUST00000158652 102 ntBASIC3.13□□□□□ -1.91
Trim27Q62158 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Trim27Q62158 Gm8338-201ENSMUST00000163928 363 ntBASIC3.13□□□□□ -1.91
Trim27Q62158 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Trim27Q62158 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
Trim27Q62158 Gm20718-201ENSMUST00000176058 259 ntBASIC3.13□□□□□ -1.91
Trim27Q62158 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Trim27Q62158 Gm24315-201ENSMUST00000177835 127 ntBASIC3.13□□□□□ -1.91
Trim27Q62158 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Trim27Q62158 Gm27527-201ENSMUST00000183903 99 ntBASIC3.13□□□□□ -1.91
Trim27Q62158 Gm29073-201ENSMUST00000185563 664 ntBASIC3.13□□□□□ -1.91
Trim27Q62158 Gm29165-201ENSMUST00000190655 664 ntBASIC3.13□□□□□ -1.91
Trim27Q62158 Gm29211-201ENSMUST00000191470 664 ntBASIC3.13□□□□□ -1.91
Trim27Q62158 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC3.13□□□□□ -1.91
Trim27Q62158 Gm43245-201ENSMUST00000197603 468 ntBASIC3.13□□□□□ -1.91
Trim27Q62158 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC3.13□□□□□ -1.91
Trim27Q62158 Gm44818-201ENSMUST00000206608 358 ntBASIC3.13□□□□□ -1.91
Trim27Q62158 AC123803.1-201ENSMUST00000216093 189 ntBASIC3.13□□□□□ -1.91
Trim27Q62158 AC116589.7-201ENSMUST00000221061 239 ntBASIC3.13□□□□□ -1.91
Trim27Q62158 AC164117.1-201ENSMUST00000221726 239 ntBASIC3.13□□□□□ -1.91
Trim27Q62158 AC165415.1-201ENSMUST00000228924 273 ntBASIC3.13□□□□□ -1.91
Trim27Q62158 Gm44821-201ENSMUST00000208212 2002 ntBASIC3.13□□□□□ -1.91
Trim27Q62158 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Trim27Q62158 Gm14638-201ENSMUST00000121338 216 ntBASIC3.12□□□□□ -1.91
Trim27Q62158 Gm15077-201ENSMUST00000122344 362 ntBASIC3.12□□□□□ -1.91
Trim27Q62158 Gm25052-201ENSMUST00000122661 158 ntBASIC3.12□□□□□ -1.91
Trim27Q62158 Gm23559-201ENSMUST00000157824 103 ntBASIC3.12□□□□□ -1.91
Trim27Q62158 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC3.12□□□□□ -1.91
Trim27Q62158 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC3.12□□□□□ -1.91
Trim27Q62158 Gm18185-201ENSMUST00000186725 667 ntBASIC3.12□□□□□ -1.91
Trim27Q62158 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Trim27Q62158 Gm44519-201ENSMUST00000206486 122 ntBASIC3.12□□□□□ -1.91
Trim27Q62158 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC3.12□□□□□ -1.91
Trim27Q62158 AC139350.4-201ENSMUST00000228483 798 ntBASIC3.12□□□□□ -1.91
Trim27Q62158 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trim27Q62158 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Trim27Q62158 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Trim27Q62158 Gm381-201ENSMUST00000117443 2037 ntBASIC3.12□□□□□ -1.91
Trim27Q62158 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Trim27Q62158 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Trim27Q62158 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Trim27Q62158 Gm14593-201ENSMUST00000119948 294 ntBASIC3.11□□□□□ -1.91
Trim27Q62158 Gm16411-201ENSMUST00000122164 1100 ntBASIC3.11□□□□□ -1.91
Trim27Q62158 Gm25373-201ENSMUST00000158156 115 ntBASIC3.11□□□□□ -1.91
Trim27Q62158 Gm22841-201ENSMUST00000158443 62 ntBASIC3.11□□□□□ -1.91
Trim27Q62158 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC3.11□□□□□ -1.91
Trim27Q62158 Gm16232-201ENSMUST00000162856 167 ntBASIC3.11□□□□□ -1.91
Trim27Q62158 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC3.11□□□□□ -1.91
Trim27Q62158 Gm24019-201ENSMUST00000178620 107 ntBASIC3.11□□□□□ -1.91
Trim27Q62158 Gm26243-201ENSMUST00000179260 107 ntBASIC3.11□□□□□ -1.91
Trim27Q62158 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC3.11□□□□□ -1.91
Trim27Q62158 Gm27919-201ENSMUST00000185163 107 ntBASIC3.11□□□□□ -1.91
Trim27Q62158 Gm28356-202ENSMUST00000187566 858 ntBASIC3.11□□□□□ -1.91
Trim27Q62158 Gm28597-201ENSMUST00000187664 666 ntBASIC3.11□□□□□ -1.91
Trim27Q62158 Trbv22-201ENSMUST00000191697 291 ntBASIC3.11□□□□□ -1.91
Trim27Q62158 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC3.11□□□□□ -1.91
Trim27Q62158 AC167192.1-201ENSMUST00000225908 139 ntBASIC3.11□□□□□ -1.91
Trim27Q62158 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Trim27Q62158 Gm22247-201ENSMUST00000082476 131 ntBASIC3.11□□□□□ -1.91
Trim27Q62158 Gm23296-201ENSMUST00000082555 107 ntBASIC3.11□□□□□ -1.91
Trim27Q62158 Gm24859-201ENSMUST00000082729 107 ntBASIC3.11□□□□□ -1.91
Trim27Q62158 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Trim27Q62158 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Trim27Q62158 AC122887.2-201ENSMUST00000219465 1603 ntBASIC3.11□□□□□ -1.91
Trim27Q62158 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
Trim27Q62158 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Trim27Q62158 Gm25507-201ENSMUST00000116981 144 ntBASIC3.1□□□□□ -1.91
Trim27Q62158 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC3.1□□□□□ -1.91
Trim27Q62158 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC3.1□□□□□ -1.91
Trim27Q62158 Gm24901-201ENSMUST00000158125 110 ntBASIC3.1□□□□□ -1.91
Trim27Q62158 Gm26401-201ENSMUST00000158502 76 ntBASIC3.1□□□□□ -1.91
Trim27Q62158 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Trim27Q62158 Gm22166-201ENSMUST00000178419 121 ntBASIC3.1□□□□□ -1.91
Trim27Q62158 Gm23288-201ENSMUST00000179213 121 ntBASIC3.1□□□□□ -1.91
Trim27Q62158 Gm22631-201ENSMUST00000179656 94 ntBASIC3.1□□□□□ -1.91
Trim27Q62158 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
Trim27Q62158 Gm18000-201ENSMUST00000212153 800 ntBASIC3.1□□□□□ -1.91
Trim27Q62158 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Trim27Q62158 Gm26228-201ENSMUST00000082512 107 ntBASIC3.1□□□□□ -1.91
Trim27Q62158 Gm25080-201ENSMUST00000082526 107 ntBASIC3.1□□□□□ -1.91
Trim27Q62158 Gm25518-201ENSMUST00000083864 107 ntBASIC3.1□□□□□ -1.91
Trim27Q62158 Gm26108-201ENSMUST00000083973 191 ntBASIC3.1□□□□□ -1.91
Trim27Q62158 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Trim27Q62158 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
Trim27Q62158 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
Trim27Q62158 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Trim27Q62158 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC3.09□□□□□ -1.91
Trim27Q62158 Gm14293-201ENSMUST00000118528 577 ntBASIC3.09□□□□□ -1.91
Trim27Q62158 Gm12954-201ENSMUST00000118610 611 ntBASIC3.09□□□□□ -1.91
Trim27Q62158 Gm12053-201ENSMUST00000119022 252 ntBASIC3.09□□□□□ -1.91
Trim27Q62158 Gm13862-201ENSMUST00000121220 197 ntBASIC3.09□□□□□ -1.91
Trim27Q62158 Gm14765-201ENSMUST00000121954 326 ntBASIC3.09□□□□□ -1.91
Trim27Q62158 Gm23379-201ENSMUST00000180026 107 ntBASIC3.09□□□□□ -1.91
Trim27Q62158 Gm3852-201ENSMUST00000182781 264 ntBASIC3.09□□□□□ -1.91
Trim27Q62158 Gm28282-201ENSMUST00000186072 186 ntBASIC3.09□□□□□ -1.91
Trim27Q62158 Gm45288-201ENSMUST00000210236 151 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms