Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm17990-201ENSMUST00000211728 553 ntBASIC3.4□□□□□ -1.87
CtcfQ61164 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
CtcfQ61164 AC120553.1-201ENSMUST00000227313 260 ntBASIC3.4□□□□□ -1.87
CtcfQ61164 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CtcfQ61164 Gm23650-201ENSMUST00000083355 70 ntBASIC3.4□□□□□ -1.87
CtcfQ61164 Mir21a-201ENSMUST00000083521 92 ntBASIC3.4□□□□□ -1.87
CtcfQ61164 Mir128-1-201ENSMUST00000083586 70 ntBASIC3.4□□□□□ -1.87
CtcfQ61164 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
CtcfQ61164 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.4□□□□□ -1.87
CtcfQ61164 Gm43663-201ENSMUST00000198643 1505 ntBASIC3.39□□□□□ -1.87
CtcfQ61164 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
CtcfQ61164 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.39□□□□□ -1.87
CtcfQ61164 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CtcfQ61164 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
CtcfQ61164 Mir673-201ENSMUST00000102361 91 ntBASIC3.39□□□□□ -1.87
CtcfQ61164 Gm6762-201ENSMUST00000121769 289 ntBASIC3.39□□□□□ -1.87
CtcfQ61164 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC3.39□□□□□ -1.87
CtcfQ61164 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC3.39□□□□□ -1.87
CtcfQ61164 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC3.39□□□□□ -1.87
CtcfQ61164 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC3.39□□□□□ -1.87
CtcfQ61164 Gm25391-201ENSMUST00000157342 134 ntBASIC3.39□□□□□ -1.87
CtcfQ61164 Gm25637-201ENSMUST00000157529 107 ntBASIC3.39□□□□□ -1.87
CtcfQ61164 Gm24847-201ENSMUST00000158032 108 ntBASIC3.39□□□□□ -1.87
CtcfQ61164 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC3.39□□□□□ -1.87
CtcfQ61164 Gm11395-201ENSMUST00000181011 499 ntBASIC3.39□□□□□ -1.87
CtcfQ61164 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC3.39□□□□□ -1.87
CtcfQ61164 Gm28299-201ENSMUST00000189908 339 ntBASIC3.39□□□□□ -1.87
CtcfQ61164 Gm19193-201ENSMUST00000190263 590 ntBASIC3.39□□□□□ -1.87
CtcfQ61164 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC3.39□□□□□ -1.87
CtcfQ61164 Gm44520-201ENSMUST00000205447 802 ntBASIC3.39□□□□□ -1.87
CtcfQ61164 Gm44824-201ENSMUST00000207021 229 ntBASIC3.39□□□□□ -1.87
CtcfQ61164 AC122905.2-201ENSMUST00000220325 269 ntBASIC3.39□□□□□ -1.87
CtcfQ61164 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC3.39□□□□□ -1.87
CtcfQ61164 Gm5955-201ENSMUST00000222712 219 ntBASIC3.39□□□□□ -1.87
CtcfQ61164 AC117588.2-201ENSMUST00000228340 311 ntBASIC3.39□□□□□ -1.87
CtcfQ61164 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CtcfQ61164 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.39□□□□□ -1.87
CtcfQ61164 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CtcfQ61164 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.38□□□□□ -1.87
CtcfQ61164 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
CtcfQ61164 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CtcfQ61164 Gm26156-201ENSMUST00000116999 123 ntBASIC3.38□□□□□ -1.87
CtcfQ61164 Gm12412-201ENSMUST00000121867 328 ntBASIC3.38□□□□□ -1.87
CtcfQ61164 Gm14765-201ENSMUST00000121954 326 ntBASIC3.38□□□□□ -1.87
CtcfQ61164 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.38□□□□□ -1.87
CtcfQ61164 Gm12238-201ENSMUST00000127764 124 ntBASIC3.38□□□□□ -1.87
CtcfQ61164 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC3.38□□□□□ -1.87
CtcfQ61164 Gm24439-201ENSMUST00000157894 117 ntBASIC3.38□□□□□ -1.87
CtcfQ61164 Gm15914-201ENSMUST00000161922 309 ntBASIC3.38□□□□□ -1.87
CtcfQ61164 Gm17162-201ENSMUST00000168538 473 ntBASIC3.38□□□□□ -1.87
CtcfQ61164 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CtcfQ61164 Mir3092-201ENSMUST00000174954 96 ntBASIC3.38□□□□□ -1.87
CtcfQ61164 Gm22290-201ENSMUST00000177655 107 ntBASIC3.38□□□□□ -1.87
CtcfQ61164 Gm22583-201ENSMUST00000178031 107 ntBASIC3.38□□□□□ -1.87
CtcfQ61164 Gm29229-201ENSMUST00000188874 323 ntBASIC3.38□□□□□ -1.87
CtcfQ61164 Gm37281-201ENSMUST00000192412 439 ntBASIC3.38□□□□□ -1.87
CtcfQ61164 Gm44870-201ENSMUST00000207291 357 ntBASIC3.38□□□□□ -1.87
CtcfQ61164 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC3.38□□□□□ -1.87
CtcfQ61164 AC167140.1-201ENSMUST00000224710 403 ntBASIC3.38□□□□□ -1.87
CtcfQ61164 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CtcfQ61164 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CtcfQ61164 Gm26228-201ENSMUST00000082512 107 ntBASIC3.38□□□□□ -1.87
CtcfQ61164 Gm25080-201ENSMUST00000082526 107 ntBASIC3.38□□□□□ -1.87
CtcfQ61164 Gm25579-201ENSMUST00000083407 106 ntBASIC3.38□□□□□ -1.87
CtcfQ61164 Gm25518-201ENSMUST00000083864 107 ntBASIC3.38□□□□□ -1.87
CtcfQ61164 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CtcfQ61164 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CtcfQ61164 Gm22021-201ENSMUST00000104353 107 ntBASIC3.37□□□□□ -1.87
CtcfQ61164 Gm9059-201ENSMUST00000118319 183 ntBASIC3.37□□□□□ -1.87
CtcfQ61164 Gm12787-201ENSMUST00000119234 396 ntBASIC3.37□□□□□ -1.87
CtcfQ61164 Gm5937-201ENSMUST00000119715 643 ntBASIC3.37□□□□□ -1.87
CtcfQ61164 Gm14049-201ENSMUST00000121009 636 ntBASIC3.37□□□□□ -1.87
CtcfQ61164 Gm14694-201ENSMUST00000121856 282 ntBASIC3.37□□□□□ -1.87
CtcfQ61164 Gm8840-201ENSMUST00000122454 386 ntBASIC3.37□□□□□ -1.87
CtcfQ61164 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC3.37□□□□□ -1.87
CtcfQ61164 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CtcfQ61164 Gm26101-201ENSMUST00000157246 105 ntBASIC3.37□□□□□ -1.87
CtcfQ61164 Mir3964-201ENSMUST00000174898 74 ntBASIC3.37□□□□□ -1.87
CtcfQ61164 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.37□□□□□ -1.87
CtcfQ61164 Gm20656-201ENSMUST00000176925 518 ntBASIC3.37□□□□□ -1.87
CtcfQ61164 Gm24100-201ENSMUST00000178592 79 ntBASIC3.37□□□□□ -1.87
CtcfQ61164 Gm24137-201ENSMUST00000180055 79 ntBASIC3.37□□□□□ -1.87
CtcfQ61164 Gm22391-201ENSMUST00000180356 79 ntBASIC3.37□□□□□ -1.87
CtcfQ61164 Gm29104-201ENSMUST00000186304 222 ntBASIC3.37□□□□□ -1.87
CtcfQ61164 Gm7858-201ENSMUST00000190177 622 ntBASIC3.37□□□□□ -1.87
CtcfQ61164 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC3.37□□□□□ -1.87
CtcfQ61164 Gm45105-201ENSMUST00000207824 397 ntBASIC3.37□□□□□ -1.87
CtcfQ61164 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CtcfQ61164 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CtcfQ61164 AC154506.1-201ENSMUST00000225178 621 ntBASIC3.37□□□□□ -1.87
CtcfQ61164 AC154515.2-201ENSMUST00000226093 406 ntBASIC3.37□□□□□ -1.87
CtcfQ61164 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
CtcfQ61164 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.37□□□□□ -1.87
CtcfQ61164 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
CtcfQ61164 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
CtcfQ61164 Gm20345-201ENSMUST00000175839 2414 ntBASIC3.36□□□□□ -1.87
CtcfQ61164 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CtcfQ61164 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CtcfQ61164 Gm11221-201ENSMUST00000117230 597 ntBASIC3.36□□□□□ -1.87
CtcfQ61164 Gm13076-201ENSMUST00000118041 204 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms