Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC2.25□□□□□ -2.05
Usf1Q61069 Gm23230-201ENSMUST00000157298 133 ntBASIC2.25□□□□□ -2.05
Usf1Q61069 Gm23317-201ENSMUST00000157999 129 ntBASIC2.25□□□□□ -2.05
Usf1Q61069 Gm22611-201ENSMUST00000158288 150 ntBASIC2.25□□□□□ -2.05
Usf1Q61069 Gm23409-201ENSMUST00000158516 237 ntBASIC2.25□□□□□ -2.05
Usf1Q61069 Gm23548-201ENSMUST00000158963 106 ntBASIC2.25□□□□□ -2.05
Usf1Q61069 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC2.25□□□□□ -2.05
Usf1Q61069 Gm18160-201ENSMUST00000214279 827 ntBASIC2.25□□□□□ -2.05
Usf1Q61069 AC123803.1-201ENSMUST00000216093 189 ntBASIC2.25□□□□□ -2.05
Usf1Q61069 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
Usf1Q61069 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
Usf1Q61069 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Usf1Q61069 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Usf1Q61069 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.24□□□□□ -2.05
Usf1Q61069 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Usf1Q61069 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Usf1Q61069 Gm22591-201ENSMUST00000104243 106 ntBASIC2.24□□□□□ -2.05
Usf1Q61069 Gm22091-201ENSMUST00000116908 127 ntBASIC2.24□□□□□ -2.05
Usf1Q61069 Gm12584-201ENSMUST00000117109 1105 ntBASIC2.24□□□□□ -2.05
Usf1Q61069 Gm16428-201ENSMUST00000121193 723 ntBASIC2.24□□□□□ -2.05
Usf1Q61069 Gm12443-201ENSMUST00000122308 323 ntBASIC2.24□□□□□ -2.05
Usf1Q61069 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Usf1Q61069 Gm24784-201ENSMUST00000157640 62 ntBASIC2.24□□□□□ -2.05
Usf1Q61069 Gm22803-201ENSMUST00000158049 283 ntBASIC2.24□□□□□ -2.05
Usf1Q61069 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Usf1Q61069 Gm23619-201ENSMUST00000178411 94 ntBASIC2.24□□□□□ -2.05
Usf1Q61069 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Usf1Q61069 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Usf1Q61069 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Usf1Q61069 Gm25474-201ENSMUST00000179052 94 ntBASIC2.24□□□□□ -2.05
Usf1Q61069 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Usf1Q61069 Gm22047-201ENSMUST00000179176 94 ntBASIC2.24□□□□□ -2.05
Usf1Q61069 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Usf1Q61069 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Usf1Q61069 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Usf1Q61069 Gm24306-201ENSMUST00000180229 79 ntBASIC2.24□□□□□ -2.05
Usf1Q61069 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC2.24□□□□□ -2.05
Usf1Q61069 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.24□□□□□ -2.05
Usf1Q61069 Gm45232-201ENSMUST00000207811 162 ntBASIC2.24□□□□□ -2.05
Usf1Q61069 Gm45658-201ENSMUST00000209197 580 ntBASIC2.24□□□□□ -2.05
Usf1Q61069 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC2.24□□□□□ -2.05
Usf1Q61069 Gm45678-201ENSMUST00000210509 295 ntBASIC2.24□□□□□ -2.05
Usf1Q61069 CT572985.2-201ENSMUST00000220496 211 ntBASIC2.24□□□□□ -2.05
Usf1Q61069 AC170810.3-201ENSMUST00000226177 374 ntBASIC2.24□□□□□ -2.05
Usf1Q61069 AC166344.2-201ENSMUST00000226747 374 ntBASIC2.24□□□□□ -2.05
Usf1Q61069 Gm9174-201ENSMUST00000078149 255 ntBASIC2.24□□□□□ -2.05
Usf1Q61069 Gm14445-201ENSMUST00000117051 1484 ntBASIC2.24□□□□□ -2.05
Usf1Q61069 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
Usf1Q61069 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Usf1Q61069 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
Usf1Q61069 Gm12871-201ENSMUST00000118758 438 ntBASIC2.23□□□□□ -2.05
Usf1Q61069 Gm23206-201ENSMUST00000122720 184 ntBASIC2.23□□□□□ -2.05
Usf1Q61069 Gm25220-201ENSMUST00000157546 95 ntBASIC2.23□□□□□ -2.05
Usf1Q61069 Gm23137-201ENSMUST00000157559 107 ntBASIC2.23□□□□□ -2.05
Usf1Q61069 Gm23025-201ENSMUST00000158769 111 ntBASIC2.23□□□□□ -2.05
Usf1Q61069 Gm16232-201ENSMUST00000162856 167 ntBASIC2.23□□□□□ -2.05
Usf1Q61069 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Usf1Q61069 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.23□□□□□ -2.05
Usf1Q61069 Gm22290-201ENSMUST00000177655 107 ntBASIC2.23□□□□□ -2.05
Usf1Q61069 Gm22583-201ENSMUST00000178031 107 ntBASIC2.23□□□□□ -2.05
Usf1Q61069 Gm5224-201ENSMUST00000183060 350 ntBASIC2.23□□□□□ -2.05
Usf1Q61069 Gm29640-201ENSMUST00000187972 278 ntBASIC2.23□□□□□ -2.05
Usf1Q61069 Gm29516-201ENSMUST00000190402 468 ntBASIC2.23□□□□□ -2.05
Usf1Q61069 Gm37029-201ENSMUST00000195773 239 ntBASIC2.23□□□□□ -2.05
Usf1Q61069 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC2.23□□□□□ -2.05
Usf1Q61069 Gm44990-201ENSMUST00000203922 217 ntBASIC2.23□□□□□ -2.05
Usf1Q61069 Gm45772-201ENSMUST00000212961 240 ntBASIC2.23□□□□□ -2.05
Usf1Q61069 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.23□□□□□ -2.05
Usf1Q61069 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.23□□□□□ -2.05
Usf1Q61069 AC126440.1-201ENSMUST00000227098 349 ntBASIC2.23□□□□□ -2.05
Usf1Q61069 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.23□□□□□ -2.05
Usf1Q61069 Gm22810-201ENSMUST00000082741 158 ntBASIC2.23□□□□□ -2.05
Usf1Q61069 Gm23503-201ENSMUST00000083903 107 ntBASIC2.23□□□□□ -2.05
Usf1Q61069 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Usf1Q61069 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.23□□□□□ -2.05
Usf1Q61069 Gm17969-201ENSMUST00000185706 2557 ntBASIC2.22□□□□□ -2.05
Usf1Q61069 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
Usf1Q61069 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Usf1Q61069 Gm24126-201ENSMUST00000104111 106 ntBASIC2.22□□□□□ -2.05
Usf1Q61069 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC2.22□□□□□ -2.05
Usf1Q61069 Gm14073-201ENSMUST00000117344 381 ntBASIC2.22□□□□□ -2.05
Usf1Q61069 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.22□□□□□ -2.05
Usf1Q61069 Gm12191-201ENSMUST00000118307 348 ntBASIC2.22□□□□□ -2.05
Usf1Q61069 Gm9703-201ENSMUST00000119573 343 ntBASIC2.22□□□□□ -2.05
Usf1Q61069 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.22□□□□□ -2.05
Usf1Q61069 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC2.22□□□□□ -2.05
Usf1Q61069 Gm12042-201ENSMUST00000120479 301 ntBASIC2.22□□□□□ -2.05
Usf1Q61069 Gm14629-201ENSMUST00000122428 144 ntBASIC2.22□□□□□ -2.05
Usf1Q61069 Gm25784-201ENSMUST00000122524 81 ntBASIC2.22□□□□□ -2.05
Usf1Q61069 Gm16533-201ENSMUST00000140035 228 ntBASIC2.22□□□□□ -2.05
Usf1Q61069 Gm23670-201ENSMUST00000157469 119 ntBASIC2.22□□□□□ -2.05
Usf1Q61069 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
Usf1Q61069 Gm27245-201ENSMUST00000184385 376 ntBASIC2.22□□□□□ -2.05
Usf1Q61069 Mir7017-201ENSMUST00000184894 62 ntBASIC2.22□□□□□ -2.05
Usf1Q61069 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC2.22□□□□□ -2.05
Usf1Q61069 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC2.22□□□□□ -2.05
Usf1Q61069 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC2.22□□□□□ -2.05
Usf1Q61069 Gm43402-201ENSMUST00000197159 159 ntBASIC2.22□□□□□ -2.05
Usf1Q61069 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC2.22□□□□□ -2.05
Usf1Q61069 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 137.3 ms