Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm12351-201ENSMUST00000118727 292 ntBASIC0.85□□□□□ -2.27
Trav3-1Q5R1I8 Gm15183-201ENSMUST00000118933 348 ntBASIC0.85□□□□□ -2.27
Trav3-1Q5R1I8 Gm14695-201ENSMUST00000121721 282 ntBASIC0.85□□□□□ -2.27
Trav3-1Q5R1I8 Gm26027-201ENSMUST00000122725 268 ntBASIC0.85□□□□□ -2.27
Trav3-1Q5R1I8 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.85□□□□□ -2.27
Trav3-1Q5R1I8 Mir9-3-201ENSMUST00000175497 90 ntBASIC0.85□□□□□ -2.27
Trav3-1Q5R1I8 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
Trav3-1Q5R1I8 Mir6341-201ENSMUST00000183490 121 ntBASIC0.85□□□□□ -2.27
Trav3-1Q5R1I8 Mir7683-201ENSMUST00000183842 61 ntBASIC0.85□□□□□ -2.27
Trav3-1Q5R1I8 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC0.85□□□□□ -2.27
Trav3-1Q5R1I8 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
Trav3-1Q5R1I8 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC0.85□□□□□ -2.27
Trav3-1Q5R1I8 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC0.85□□□□□ -2.27
Trav3-1Q5R1I8 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC0.85□□□□□ -2.27
Trav3-1Q5R1I8 Gm45730-201ENSMUST00000212560 395 ntBASIC0.85□□□□□ -2.27
Trav3-1Q5R1I8 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC0.85□□□□□ -2.27
Trav3-1Q5R1I8 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC0.85□□□□□ -2.27
Trav3-1Q5R1I8 AC153801.1-201ENSMUST00000217904 947 ntBASIC0.85□□□□□ -2.27
Trav3-1Q5R1I8 Gm19326-201ENSMUST00000219818 326 ntBASIC0.85□□□□□ -2.27
Trav3-1Q5R1I8 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC0.85□□□□□ -2.27
Trav3-1Q5R1I8 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC0.85□□□□□ -2.27
Trav3-1Q5R1I8 Gm22249-201ENSMUST00000082485 136 ntBASIC0.85□□□□□ -2.27
Trav3-1Q5R1I8 Gm22980-201ENSMUST00000082608 70 ntBASIC0.85□□□□□ -2.27
Trav3-1Q5R1I8 Gm43498-201ENSMUST00000202002 1486 ntBASIC0.85□□□□□ -2.27
Trav3-1Q5R1I8 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
Trav3-1Q5R1I8 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
Trav3-1Q5R1I8 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC0.84□□□□□ -2.27
Trav3-1Q5R1I8 Gm25420-201ENSMUST00000104216 127 ntBASIC0.84□□□□□ -2.27
Trav3-1Q5R1I8 Gm9432-201ENSMUST00000117810 759 ntBASIC0.84□□□□□ -2.27
Trav3-1Q5R1I8 Gm11490-201ENSMUST00000118128 272 ntBASIC0.84□□□□□ -2.27
Trav3-1Q5R1I8 Gm2003-201ENSMUST00000118537 636 ntBASIC0.84□□□□□ -2.27
Trav3-1Q5R1I8 Gm12871-201ENSMUST00000118758 438 ntBASIC0.84□□□□□ -2.27
Trav3-1Q5R1I8 Gm14945-201ENSMUST00000119556 1118 ntBASIC0.84□□□□□ -2.27
Trav3-1Q5R1I8 Gm12607-201ENSMUST00000120724 493 ntBASIC0.84□□□□□ -2.27
Trav3-1Q5R1I8 Gm24627-201ENSMUST00000122764 138 ntBASIC0.84□□□□□ -2.27
Trav3-1Q5R1I8 n-R5s187-201ENSMUST00000122769 111 ntBASIC0.84□□□□□ -2.27
Trav3-1Q5R1I8 Gm25637-201ENSMUST00000157529 107 ntBASIC0.84□□□□□ -2.27
Trav3-1Q5R1I8 Gm26041-201ENSMUST00000158148 108 ntBASIC0.84□□□□□ -2.27
Trav3-1Q5R1I8 Mir3076-201ENSMUST00000175415 60 ntBASIC0.84□□□□□ -2.27
Trav3-1Q5R1I8 Mir8106-201ENSMUST00000184520 139 ntBASIC0.84□□□□□ -2.27
Trav3-1Q5R1I8 Gm37771-201ENSMUST00000193121 265 ntBASIC0.84□□□□□ -2.27
Trav3-1Q5R1I8 Igkv13-76-201ENSMUST00000197621 347 ntBASIC0.84□□□□□ -2.27
Trav3-1Q5R1I8 AC164597.2-201ENSMUST00000226738 603 ntBASIC0.84□□□□□ -2.27
Trav3-1Q5R1I8 AC115291.1-201ENSMUST00000226803 258 ntBASIC0.84□□□□□ -2.27
Trav3-1Q5R1I8 Gm26226-201ENSMUST00000082509 116 ntBASIC0.84□□□□□ -2.27
Trav3-1Q5R1I8 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC0.84□□□□□ -2.27
Trav3-1Q5R1I8 Gm26015-201ENSMUST00000104402 125 ntBASIC0.83□□□□□ -2.28
Trav3-1Q5R1I8 Gm15176-201ENSMUST00000117734 135 ntBASIC0.83□□□□□ -2.28
Trav3-1Q5R1I8 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC0.83□□□□□ -2.28
Trav3-1Q5R1I8 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC0.83□□□□□ -2.28
Trav3-1Q5R1I8 Gm12956-201ENSMUST00000122184 414 ntBASIC0.83□□□□□ -2.28
Trav3-1Q5R1I8 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC0.83□□□□□ -2.28
Trav3-1Q5R1I8 Gm23124-201ENSMUST00000157650 107 ntBASIC0.83□□□□□ -2.28
Trav3-1Q5R1I8 Snord11-201ENSMUST00000158468 84 ntBASIC0.83□□□□□ -2.28
Trav3-1Q5R1I8 Gm17162-201ENSMUST00000168538 473 ntBASIC0.83□□□□□ -2.28
Trav3-1Q5R1I8 Gm22129-201ENSMUST00000179034 107 ntBASIC0.83□□□□□ -2.28
Trav3-1Q5R1I8 Gm22307-201ENSMUST00000180019 107 ntBASIC0.83□□□□□ -2.28
Trav3-1Q5R1I8 Mir8119-201ENSMUST00000183371 129 ntBASIC0.83□□□□□ -2.28
Trav3-1Q5R1I8 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
Trav3-1Q5R1I8 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC0.83□□□□□ -2.28
Trav3-1Q5R1I8 Gm32222-201ENSMUST00000203296 298 ntBASIC0.83□□□□□ -2.28
Trav3-1Q5R1I8 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC0.83□□□□□ -2.28
Trav3-1Q5R1I8 Gm44128-201ENSMUST00000204909 219 ntBASIC0.83□□□□□ -2.28
Trav3-1Q5R1I8 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC0.83□□□□□ -2.28
Trav3-1Q5R1I8 Gm46369-201ENSMUST00000221577 401 ntBASIC0.83□□□□□ -2.28
Trav3-1Q5R1I8 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC0.83□□□□□ -2.28
Trav3-1Q5R1I8 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
Trav3-1Q5R1I8 Gm33962-201ENSMUST00000182643 2592 ntBASIC0.83□□□□□ -2.28
Trav3-1Q5R1I8 Gm24142-201ENSMUST00000101960 107 ntBASIC0.82□□□□□ -2.28
Trav3-1Q5R1I8 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC0.82□□□□□ -2.28
Trav3-1Q5R1I8 Gm14629-201ENSMUST00000122428 144 ntBASIC0.82□□□□□ -2.28
Trav3-1Q5R1I8 Gm24745-201ENSMUST00000157840 85 ntBASIC0.82□□□□□ -2.28
Trav3-1Q5R1I8 Gm24358-201ENSMUST00000158424 288 ntBASIC0.82□□□□□ -2.28
Trav3-1Q5R1I8 Gm25490-201ENSMUST00000158734 130 ntBASIC0.82□□□□□ -2.28
Trav3-1Q5R1I8 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC0.82□□□□□ -2.28
Trav3-1Q5R1I8 Gm21171-201ENSMUST00000180048 673 ntBASIC0.82□□□□□ -2.28
Trav3-1Q5R1I8 Gm28000-201ENSMUST00000184380 85 ntBASIC0.82□□□□□ -2.28
Trav3-1Q5R1I8 Gm20118-201ENSMUST00000187207 162 ntBASIC0.82□□□□□ -2.28
Trav3-1Q5R1I8 Gm18635-201ENSMUST00000199020 1060 ntBASIC0.82□□□□□ -2.28
Trav3-1Q5R1I8 Gm43493-201ENSMUST00000199837 202 ntBASIC0.82□□□□□ -2.28
Trav3-1Q5R1I8 Gm43930-201ENSMUST00000203868 845 ntBASIC0.82□□□□□ -2.28
Trav3-1Q5R1I8 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC0.82□□□□□ -2.28
Trav3-1Q5R1I8 Gm18026-201ENSMUST00000222789 727 ntBASIC0.82□□□□□ -2.28
Trav3-1Q5R1I8 CU062626.2-201ENSMUST00000223953 274 ntBASIC0.82□□□□□ -2.28
Trav3-1Q5R1I8 AC113031.5-201ENSMUST00000227116 606 ntBASIC0.82□□□□□ -2.28
Trav3-1Q5R1I8 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Trav3-1Q5R1I8 Gm24928-201ENSMUST00000083399 107 ntBASIC0.82□□□□□ -2.28
Trav3-1Q5R1I8 Gm25897-201ENSMUST00000083709 107 ntBASIC0.82□□□□□ -2.28
Trav3-1Q5R1I8 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC0.82□□□□□ -2.28
Trav3-1Q5R1I8 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Trav3-1Q5R1I8 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
Trav3-1Q5R1I8 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC0.81□□□□□ -2.28
Trav3-1Q5R1I8 Mir344c-201ENSMUST00000103919 92 ntBASIC0.81□□□□□ -2.28
Trav3-1Q5R1I8 Gm6587-201ENSMUST00000120219 613 ntBASIC0.81□□□□□ -2.28
Trav3-1Q5R1I8 Gm22960-201ENSMUST00000122517 104 ntBASIC0.81□□□□□ -2.28
Trav3-1Q5R1I8 Gm25808-201ENSMUST00000122784 284 ntBASIC0.81□□□□□ -2.28
Trav3-1Q5R1I8 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC0.81□□□□□ -2.28
Trav3-1Q5R1I8 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC0.81□□□□□ -2.28
Trav3-1Q5R1I8 Gm23381-201ENSMUST00000157676 94 ntBASIC0.81□□□□□ -2.28
Trav3-1Q5R1I8 Gm23558-201ENSMUST00000157823 80 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms