Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm22382-201ENSMUST00000158185 130 ntBASIC1.47□□□□□ -2.17
Trav5d-4Q5R1F6 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC1.47□□□□□ -2.17
Trav5d-4Q5R1F6 Gm27722-201ENSMUST00000183908 76 ntBASIC1.47□□□□□ -2.17
Trav5d-4Q5R1F6 Mir7226-201ENSMUST00000184953 60 ntBASIC1.47□□□□□ -2.17
Trav5d-4Q5R1F6 Gm43431-201ENSMUST00000198577 340 ntBASIC1.47□□□□□ -2.17
Trav5d-4Q5R1F6 Gm18635-201ENSMUST00000199020 1060 ntBASIC1.47□□□□□ -2.17
Trav5d-4Q5R1F6 Gm45754-201ENSMUST00000212380 279 ntBASIC1.47□□□□□ -2.17
Trav5d-4Q5R1F6 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Trav5d-4Q5R1F6 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
Trav5d-4Q5R1F6 AC172027.1-201ENSMUST00000217659 337 ntBASIC1.47□□□□□ -2.17
Trav5d-4Q5R1F6 AC167202.1-201ENSMUST00000219027 331 ntBASIC1.47□□□□□ -2.17
Trav5d-4Q5R1F6 AC154552.4-201ENSMUST00000222171 151 ntBASIC1.47□□□□□ -2.17
Trav5d-4Q5R1F6 Gm20679-201ENSMUST00000177285 1402 ntBASIC1.47□□□□□ -2.17
Trav5d-4Q5R1F6 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC1.47□□□□□ -2.17
Trav5d-4Q5R1F6 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Trav5d-4Q5R1F6 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Trav5d-4Q5R1F6 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Trav5d-4Q5R1F6 Gm23109-201ENSMUST00000116867 126 ntBASIC1.46□□□□□ -2.18
Trav5d-4Q5R1F6 Defa-ps1-201ENSMUST00000119062 282 ntBASIC1.46□□□□□ -2.18
Trav5d-4Q5R1F6 Gm12646-201ENSMUST00000119144 238 ntBASIC1.46□□□□□ -2.18
Trav5d-4Q5R1F6 Defa-ps6-201ENSMUST00000122172 282 ntBASIC1.46□□□□□ -2.18
Trav5d-4Q5R1F6 Gm14629-201ENSMUST00000122428 144 ntBASIC1.46□□□□□ -2.18
Trav5d-4Q5R1F6 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC1.46□□□□□ -2.18
Trav5d-4Q5R1F6 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC1.46□□□□□ -2.18
Trav5d-4Q5R1F6 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Trav5d-4Q5R1F6 Gm23587-201ENSMUST00000157658 84 ntBASIC1.46□□□□□ -2.18
Trav5d-4Q5R1F6 Gm24858-201ENSMUST00000158058 323 ntBASIC1.46□□□□□ -2.18
Trav5d-4Q5R1F6 Gm24878-201ENSMUST00000158782 104 ntBASIC1.46□□□□□ -2.18
Trav5d-4Q5R1F6 Gm17085-201ENSMUST00000165425 502 ntBASIC1.46□□□□□ -2.18
Trav5d-4Q5R1F6 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Trav5d-4Q5R1F6 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Trav5d-4Q5R1F6 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Trav5d-4Q5R1F6 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Trav5d-4Q5R1F6 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Trav5d-4Q5R1F6 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.46□□□□□ -2.18
Trav5d-4Q5R1F6 Gm44391-201ENSMUST00000198490 93 ntBASIC1.46□□□□□ -2.18
Trav5d-4Q5R1F6 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC1.46□□□□□ -2.18
Trav5d-4Q5R1F6 Gm9377-201ENSMUST00000207227 623 ntBASIC1.46□□□□□ -2.18
Trav5d-4Q5R1F6 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC1.46□□□□□ -2.18
Trav5d-4Q5R1F6 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC1.46□□□□□ -2.18
Trav5d-4Q5R1F6 Gm23452-201ENSMUST00000083327 107 ntBASIC1.46□□□□□ -2.18
Trav5d-4Q5R1F6 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Trav5d-4Q5R1F6 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Trav5d-4Q5R1F6 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Trav5d-4Q5R1F6 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.45□□□□□ -2.18
Trav5d-4Q5R1F6 Gm15110-201ENSMUST00000117545 881 ntBASIC1.45□□□□□ -2.18
Trav5d-4Q5R1F6 Gm15112-201ENSMUST00000120152 860 ntBASIC1.45□□□□□ -2.18
Trav5d-4Q5R1F6 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC1.45□□□□□ -2.18
Trav5d-4Q5R1F6 Gm22793-201ENSMUST00000157227 330 ntBASIC1.45□□□□□ -2.18
Trav5d-4Q5R1F6 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.45□□□□□ -2.18
Trav5d-4Q5R1F6 Mir7679-201ENSMUST00000183379 63 ntBASIC1.45□□□□□ -2.18
Trav5d-4Q5R1F6 Gm27715-201ENSMUST00000184714 260 ntBASIC1.45□□□□□ -2.18
Trav5d-4Q5R1F6 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
Trav5d-4Q5R1F6 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Trav5d-4Q5R1F6 Gm38281-201ENSMUST00000192301 315 ntBASIC1.45□□□□□ -2.18
Trav5d-4Q5R1F6 Gm32175-201ENSMUST00000193641 346 ntBASIC1.45□□□□□ -2.18
Trav5d-4Q5R1F6 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.45□□□□□ -2.18
Trav5d-4Q5R1F6 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC1.45□□□□□ -2.18
Trav5d-4Q5R1F6 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.45□□□□□ -2.18
Trav5d-4Q5R1F6 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.45□□□□□ -2.18
Trav5d-4Q5R1F6 Gm44524-201ENSMUST00000203899 271 ntBASIC1.45□□□□□ -2.18
Trav5d-4Q5R1F6 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC1.45□□□□□ -2.18
Trav5d-4Q5R1F6 AC192088.2-201ENSMUST00000227590 411 ntBASIC1.45□□□□□ -2.18
Trav5d-4Q5R1F6 Gm26055-201ENSMUST00000083038 107 ntBASIC1.45□□□□□ -2.18
Trav5d-4Q5R1F6 Gm24412-201ENSMUST00000083426 109 ntBASIC1.45□□□□□ -2.18
Trav5d-4Q5R1F6 Mir107-201ENSMUST00000083660 87 ntBASIC1.45□□□□□ -2.18
Trav5d-4Q5R1F6 Gm36989-201ENSMUST00000193225 2160 ntBASIC1.45□□□□□ -2.18
Trav5d-4Q5R1F6 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Trav5d-4Q5R1F6 Gm14657-201ENSMUST00000117461 302 ntBASIC1.44□□□□□ -2.18
Trav5d-4Q5R1F6 Gm12096-201ENSMUST00000121149 829 ntBASIC1.44□□□□□ -2.18
Trav5d-4Q5R1F6 Gm26348-201ENSMUST00000157528 240 ntBASIC1.44□□□□□ -2.18
Trav5d-4Q5R1F6 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC1.44□□□□□ -2.18
Trav5d-4Q5R1F6 Gm19932-201ENSMUST00000177033 313 ntBASIC1.44□□□□□ -2.18
Trav5d-4Q5R1F6 Mup-ps7-201ENSMUST00000178292 545 ntBASIC1.44□□□□□ -2.18
Trav5d-4Q5R1F6 Mup-ps8-201ENSMUST00000178663 545 ntBASIC1.44□□□□□ -2.18
Trav5d-4Q5R1F6 Mup-ps9-201ENSMUST00000178847 545 ntBASIC1.44□□□□□ -2.18
Trav5d-4Q5R1F6 Mup-ps6-201ENSMUST00000179564 545 ntBASIC1.44□□□□□ -2.18
Trav5d-4Q5R1F6 Gm26864-201ENSMUST00000181346 156 ntBASIC1.44□□□□□ -2.18
Trav5d-4Q5R1F6 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Trav5d-4Q5R1F6 Gm44182-201ENSMUST00000204052 115 ntBASIC1.44□□□□□ -2.18
Trav5d-4Q5R1F6 Gm18598-201ENSMUST00000207724 597 ntBASIC1.44□□□□□ -2.18
Trav5d-4Q5R1F6 AC157017.1-201ENSMUST00000220148 364 ntBASIC1.44□□□□□ -2.18
Trav5d-4Q5R1F6 AC133654.1-201ENSMUST00000228411 672 ntBASIC1.44□□□□□ -2.18
Trav5d-4Q5R1F6 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Trav5d-4Q5R1F6 Gm26922-201ENSMUST00000082687 72 ntBASIC1.44□□□□□ -2.18
Trav5d-4Q5R1F6 Gm23040-201ENSMUST00000083869 163 ntBASIC1.44□□□□□ -2.18
Trav5d-4Q5R1F6 Gm21286-201ENSMUST00000098035 545 ntBASIC1.44□□□□□ -2.18
Trav5d-4Q5R1F6 Gm15088-201ENSMUST00000117973 1508 ntBASIC1.44□□□□□ -2.18
Trav5d-4Q5R1F6 Gm15098-201ENSMUST00000119036 1508 ntBASIC1.44□□□□□ -2.18
Trav5d-4Q5R1F6 Gm42736-201ENSMUST00000200723 1353 ntBASIC1.44□□□□□ -2.18
Trav5d-4Q5R1F6 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Trav5d-4Q5R1F6 Mir873a-201ENSMUST00000104863 77 ntBASIC1.43□□□□□ -2.18
Trav5d-4Q5R1F6 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC1.43□□□□□ -2.18
Trav5d-4Q5R1F6 Gm13510-201ENSMUST00000118659 429 ntBASIC1.43□□□□□ -2.18
Trav5d-4Q5R1F6 Gm14899-201ENSMUST00000118673 548 ntBASIC1.43□□□□□ -2.18
Trav5d-4Q5R1F6 Gm11786-201ENSMUST00000120799 155 ntBASIC1.43□□□□□ -2.18
Trav5d-4Q5R1F6 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC1.43□□□□□ -2.18
Trav5d-4Q5R1F6 Gm23043-201ENSMUST00000157890 109 ntBASIC1.43□□□□□ -2.18
Trav5d-4Q5R1F6 Mir669n-201ENSMUST00000158636 54 ntBASIC1.43□□□□□ -2.18
Trav5d-4Q5R1F6 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 99.1 ms