Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Gm11935-201ENSMUST00000118608 399 ntBASIC1.64□□□□□ -2.15
Col27a1Q5QNQ9 Gm22957-201ENSMUST00000122511 123 ntBASIC1.64□□□□□ -2.15
Col27a1Q5QNQ9 Mir6371-201ENSMUST00000184470 111 ntBASIC1.64□□□□□ -2.15
Col27a1Q5QNQ9 Gm28383-201ENSMUST00000187563 139 ntBASIC1.64□□□□□ -2.15
Col27a1Q5QNQ9 Gm29262-201ENSMUST00000190084 196 ntBASIC1.64□□□□□ -2.15
Col27a1Q5QNQ9 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC1.64□□□□□ -2.15
Col27a1Q5QNQ9 Gm24342-201ENSMUST00000103907 104 ntBASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 Mir3096-201ENSMUST00000116685 71 ntBASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 Gm12765-201ENSMUST00000117273 615 ntBASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 Gm14751-201ENSMUST00000117693 222 ntBASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 Gm15176-201ENSMUST00000117734 135 ntBASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 Gm5937-201ENSMUST00000119715 643 ntBASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 Gm13913-201ENSMUST00000121126 260 ntBASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 Gm13194-201ENSMUST00000142299 311 ntBASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 Gm23034-201ENSMUST00000158001 147 ntBASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 Gm24656-201ENSMUST00000177548 132 ntBASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 Gm8151-201ENSMUST00000184817 871 ntBASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 Gm28779-201ENSMUST00000189678 323 ntBASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 Gm19891-201ENSMUST00000189771 303 ntBASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 Gm44392-201ENSMUST00000196758 115 ntBASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 Gm19089-201ENSMUST00000197207 613 ntBASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 Gm18341-201ENSMUST00000197538 622 ntBASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 AC069561.3-201ENSMUST00000217321 114 ntBASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 Gm3333-202ENSMUST00000221763 1044 ntBASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 AC124524.1-201ENSMUST00000225833 181 ntBASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 AC161758.1-201ENSMUST00000226123 310 ntBASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 Gm25796-201ENSMUST00000082645 163 ntBASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 Gm24151-201ENSMUST00000082758 141 ntBASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 Mir343-201ENSMUST00000102360 75 ntBASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 Igkv13-87-201ENSMUST00000114214 286 ntBASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 Gm13714-201ENSMUST00000117313 221 ntBASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 Gm15312-201ENSMUST00000118827 271 ntBASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 Gm14940-201ENSMUST00000119309 495 ntBASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 Gm16053-201ENSMUST00000120511 188 ntBASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 Gm15309-201ENSMUST00000121644 240 ntBASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 Gm24959-201ENSMUST00000157924 146 ntBASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 Mir1954-201ENSMUST00000175595 86 ntBASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 Gm27271-201ENSMUST00000183509 170 ntBASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 Mir6995-201ENSMUST00000183658 71 ntBASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 Gm17946-201ENSMUST00000186856 538 ntBASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 Gm31520-201ENSMUST00000203048 733 ntBASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 Gm18691-201ENSMUST00000203593 872 ntBASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 Gm45696-201ENSMUST00000212088 985 ntBASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 AC160930.1-201ENSMUST00000227194 337 ntBASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 Gm25007-201ENSMUST00000083808 133 ntBASIC1.63□□□□□ -2.15
Col27a1Q5QNQ9 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Col27a1Q5QNQ9 Gm22543-201ENSMUST00000104347 94 ntBASIC1.62□□□□□ -2.15
Col27a1Q5QNQ9 Gm22560-201ENSMUST00000157332 120 ntBASIC1.62□□□□□ -2.15
Col27a1Q5QNQ9 Gm23754-201ENSMUST00000157576 63 ntBASIC1.62□□□□□ -2.15
Col27a1Q5QNQ9 Gm23083-201ENSMUST00000157851 116 ntBASIC1.62□□□□□ -2.15
Col27a1Q5QNQ9 Gm22131-201ENSMUST00000178415 94 ntBASIC1.62□□□□□ -2.15
Col27a1Q5QNQ9 Mir6541-201ENSMUST00000183649 110 ntBASIC1.62□□□□□ -2.15
Col27a1Q5QNQ9 Gm38231-201ENSMUST00000192030 347 ntBASIC1.62□□□□□ -2.15
Col27a1Q5QNQ9 Gm19147-201ENSMUST00000199622 652 ntBASIC1.62□□□□□ -2.15
Col27a1Q5QNQ9 Gm45438-201ENSMUST00000210242 564 ntBASIC1.62□□□□□ -2.15
Col27a1Q5QNQ9 Gm18242-201ENSMUST00000218455 542 ntBASIC1.62□□□□□ -2.15
Col27a1Q5QNQ9 AC124569.1-201ENSMUST00000225932 101 ntBASIC1.62□□□□□ -2.15
Col27a1Q5QNQ9 AC165284.1-201ENSMUST00000228614 458 ntBASIC1.62□□□□□ -2.15
Col27a1Q5QNQ9 Mir103-2-201ENSMUST00000083629 86 ntBASIC1.62□□□□□ -2.15
Col27a1Q5QNQ9 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC1.62□□□□□ -2.15
Col27a1Q5QNQ9 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Col27a1Q5QNQ9 Gm15381-201ENSMUST00000121501 1156 ntBASIC1.61□□□□□ -2.15
Col27a1Q5QNQ9 Gm23819-201ENSMUST00000158744 109 ntBASIC1.61□□□□□ -2.15
Col27a1Q5QNQ9 Gm3102-201ENSMUST00000164236 489 ntBASIC1.61□□□□□ -2.15
Col27a1Q5QNQ9 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC1.61□□□□□ -2.15
Col27a1Q5QNQ9 Gm24754-201ENSMUST00000177997 107 ntBASIC1.61□□□□□ -2.15
Col27a1Q5QNQ9 Mir7052-201ENSMUST00000184821 65 ntBASIC1.61□□□□□ -2.15
Col27a1Q5QNQ9 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC1.61□□□□□ -2.15
Col27a1Q5QNQ9 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.61□□□□□ -2.15
Col27a1Q5QNQ9 AC158142.2-201ENSMUST00000227892 635 ntBASIC1.61□□□□□ -2.15
Col27a1Q5QNQ9 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Col27a1Q5QNQ9 Gm42721-201ENSMUST00000197165 1523 ntBASIC1.61□□□□□ -2.15
Col27a1Q5QNQ9 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Col27a1Q5QNQ9 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Col27a1Q5QNQ9 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Col27a1Q5QNQ9 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Col27a1Q5QNQ9 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Col27a1Q5QNQ9 Gm22390-201ENSMUST00000157588 325 ntBASIC1.61□□□□□ -2.15
Col27a1Q5QNQ9 Gm26186-201ENSMUST00000157689 125 ntBASIC1.61□□□□□ -2.15
Col27a1Q5QNQ9 Gm24174-201ENSMUST00000158933 111 ntBASIC1.61□□□□□ -2.15
Col27a1Q5QNQ9 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.61□□□□□ -2.15
Col27a1Q5QNQ9 Mir6372-201ENSMUST00000185114 109 ntBASIC1.61□□□□□ -2.15
Col27a1Q5QNQ9 Gm18645-201ENSMUST00000209593 651 ntBASIC1.61□□□□□ -2.15
Col27a1Q5QNQ9 Gm18488-201ENSMUST00000215082 364 ntBASIC1.61□□□□□ -2.15
Col27a1Q5QNQ9 CT009713.9-201ENSMUST00000223604 389 ntBASIC1.61□□□□□ -2.15
Col27a1Q5QNQ9 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC1.61□□□□□ -2.15
Col27a1Q5QNQ9 Gm25126-201ENSMUST00000083343 102 ntBASIC1.61□□□□□ -2.15
Col27a1Q5QNQ9 Gm22353-201ENSMUST00000083918 136 ntBASIC1.61□□□□□ -2.15
Col27a1Q5QNQ9 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Col27a1Q5QNQ9 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms