Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Gm37431-201ENSMUST00000195102 111 ntBASIC4.29□□□□□ -1.72
Rnf43Q5NCP0 Gm43814-201ENSMUST00000197851 413 ntBASIC4.29□□□□□ -1.72
Rnf43Q5NCP0 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Rnf43Q5NCP0 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC4.29□□□□□ -1.72
Rnf43Q5NCP0 AC159896.1-201ENSMUST00000215264 215 ntBASIC4.29□□□□□ -1.72
Rnf43Q5NCP0 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Rnf43Q5NCP0 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC4.29□□□□□ -1.72
Rnf43Q5NCP0 Mir323-201ENSMUST00000083683 86 ntBASIC4.29□□□□□ -1.72
Rnf43Q5NCP0 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Rnf43Q5NCP0 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
Rnf43Q5NCP0 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
Rnf43Q5NCP0 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Rnf43Q5NCP0 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.29□□□□□ -1.72
Rnf43Q5NCP0 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC4.29□□□□□ -1.72
Rnf43Q5NCP0 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.28□□□□□ -1.72
Rnf43Q5NCP0 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Rnf43Q5NCP0 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.28□□□□□ -1.72
Rnf43Q5NCP0 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Rnf43Q5NCP0 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Rnf43Q5NCP0 Gm38057-201ENSMUST00000195551 3203 ntBASIC4.28□□□□□ -1.72
Rnf43Q5NCP0 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Rnf43Q5NCP0 Gm23271-201ENSMUST00000104052 124 ntBASIC4.28□□□□□ -1.72
Rnf43Q5NCP0 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Rnf43Q5NCP0 Gm14299-201ENSMUST00000117586 397 ntBASIC4.28□□□□□ -1.72
Rnf43Q5NCP0 Gm13457-201ENSMUST00000117885 267 ntBASIC4.28□□□□□ -1.72
Rnf43Q5NCP0 Gm14714-201ENSMUST00000119743 439 ntBASIC4.28□□□□□ -1.72
Rnf43Q5NCP0 Gm15244-201ENSMUST00000121122 130 ntBASIC4.28□□□□□ -1.72
Rnf43Q5NCP0 Mup-ps20-201ENSMUST00000121132 389 ntBASIC4.28□□□□□ -1.72
Rnf43Q5NCP0 Gm22792-201ENSMUST00000157225 133 ntBASIC4.28□□□□□ -1.72
Rnf43Q5NCP0 Gm10357-201ENSMUST00000159886 264 ntBASIC4.28□□□□□ -1.72
Rnf43Q5NCP0 Mir1251-201ENSMUST00000175486 84 ntBASIC4.28□□□□□ -1.72
Rnf43Q5NCP0 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC4.28□□□□□ -1.72
Rnf43Q5NCP0 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC4.28□□□□□ -1.72
Rnf43Q5NCP0 Fth-ps3-201ENSMUST00000210405 358 ntBASIC4.28□□□□□ -1.72
Rnf43Q5NCP0 Gm29774-201ENSMUST00000219270 436 ntBASIC4.28□□□□□ -1.72
Rnf43Q5NCP0 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Rnf43Q5NCP0 Mir181b-2-201ENSMUST00000083644 89 ntBASIC4.28□□□□□ -1.72
Rnf43Q5NCP0 Gm25257-201ENSMUST00000083907 110 ntBASIC4.28□□□□□ -1.72
Rnf43Q5NCP0 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
Rnf43Q5NCP0 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Rnf43Q5NCP0 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.28□□□□□ -1.72
Rnf43Q5NCP0 Gm10033-201ENSMUST00000072427 1813 ntBASIC4.28□□□□□ -1.72
Rnf43Q5NCP0 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.27□□□□□ -1.73
Rnf43Q5NCP0 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.27□□□□□ -1.73
Rnf43Q5NCP0 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Rnf43Q5NCP0 Gm3623-201ENSMUST00000173643 2747 ntBASIC4.27□□□□□ -1.73
Rnf43Q5NCP0 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Rnf43Q5NCP0 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Rnf43Q5NCP0 Gm37045-201ENSMUST00000192016 2463 ntBASIC4.27□□□□□ -1.73
Rnf43Q5NCP0 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Rnf43Q5NCP0 Gm22784-201ENSMUST00000104088 132 ntBASIC4.27□□□□□ -1.73
Rnf43Q5NCP0 Gm25833-201ENSMUST00000104137 133 ntBASIC4.27□□□□□ -1.73
Rnf43Q5NCP0 Gm8666-201ENSMUST00000117517 292 ntBASIC4.27□□□□□ -1.73
Rnf43Q5NCP0 Gm11572-201ENSMUST00000119164 120 ntBASIC4.27□□□□□ -1.73
Rnf43Q5NCP0 Gm6071-201ENSMUST00000119561 440 ntBASIC4.27□□□□□ -1.73
Rnf43Q5NCP0 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC4.27□□□□□ -1.73
Rnf43Q5NCP0 Gm23232-201ENSMUST00000157300 105 ntBASIC4.27□□□□□ -1.73
Rnf43Q5NCP0 Gm25054-201ENSMUST00000157370 97 ntBASIC4.27□□□□□ -1.73
Rnf43Q5NCP0 Gm24720-201ENSMUST00000157518 166 ntBASIC4.27□□□□□ -1.73
Rnf43Q5NCP0 Gm24505-201ENSMUST00000157682 126 ntBASIC4.27□□□□□ -1.73
Rnf43Q5NCP0 Gm23365-201ENSMUST00000175019 125 ntBASIC4.27□□□□□ -1.73
Rnf43Q5NCP0 Gm25960-201ENSMUST00000175110 125 ntBASIC4.27□□□□□ -1.73
Rnf43Q5NCP0 Gm44453-201ENSMUST00000175161 126 ntBASIC4.27□□□□□ -1.73
Rnf43Q5NCP0 Gm22120-201ENSMUST00000175590 70 ntBASIC4.27□□□□□ -1.73
Rnf43Q5NCP0 Gm25195-201ENSMUST00000177656 126 ntBASIC4.27□□□□□ -1.73
Rnf43Q5NCP0 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC4.27□□□□□ -1.73
Rnf43Q5NCP0 Gm43250-201ENSMUST00000196536 273 ntBASIC4.27□□□□□ -1.73
Rnf43Q5NCP0 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Rnf43Q5NCP0 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Rnf43Q5NCP0 AC187103.4-202ENSMUST00000225091 230 ntBASIC4.27□□□□□ -1.73
Rnf43Q5NCP0 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Rnf43Q5NCP0 Gm22297-201ENSMUST00000083312 106 ntBASIC4.27□□□□□ -1.73
Rnf43Q5NCP0 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC4.27□□□□□ -1.73
Rnf43Q5NCP0 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Rnf43Q5NCP0 Gm43327-201ENSMUST00000199285 4055 ntBASIC4.26□□□□□ -1.73
Rnf43Q5NCP0 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC4.26□□□□□ -1.73
Rnf43Q5NCP0 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.26□□□□□ -1.73
Rnf43Q5NCP0 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Rnf43Q5NCP0 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Rnf43Q5NCP0 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Rnf43Q5NCP0 Gm14473-201ENSMUST00000122269 557 ntBASIC4.26□□□□□ -1.73
Rnf43Q5NCP0 Gm25599-201ENSMUST00000157816 103 ntBASIC4.26□□□□□ -1.73
Rnf43Q5NCP0 Gm26001-201ENSMUST00000157989 103 ntBASIC4.26□□□□□ -1.73
Rnf43Q5NCP0 Gm26005-201ENSMUST00000158802 134 ntBASIC4.26□□□□□ -1.73
Rnf43Q5NCP0 Gm28755-201ENSMUST00000185773 199 ntBASIC4.26□□□□□ -1.73
Rnf43Q5NCP0 Gm28830-201ENSMUST00000188192 213 ntBASIC4.26□□□□□ -1.73
Rnf43Q5NCP0 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.26□□□□□ -1.73
Rnf43Q5NCP0 Gm36189-201ENSMUST00000204113 523 ntBASIC4.26□□□□□ -1.73
Rnf43Q5NCP0 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC4.26□□□□□ -1.73
Rnf43Q5NCP0 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC4.26□□□□□ -1.73
Rnf43Q5NCP0 Gm19366-201ENSMUST00000206996 156 ntBASIC4.26□□□□□ -1.73
Rnf43Q5NCP0 Gm44960-201ENSMUST00000207403 141 ntBASIC4.26□□□□□ -1.73
Rnf43Q5NCP0 Gm6842-201ENSMUST00000211361 390 ntBASIC4.26□□□□□ -1.73
Rnf43Q5NCP0 Gm45796-201ENSMUST00000212483 114 ntBASIC4.26□□□□□ -1.73
Rnf43Q5NCP0 Gm18188-201ENSMUST00000219386 478 ntBASIC4.26□□□□□ -1.73
Rnf43Q5NCP0 Gm4036-201ENSMUST00000220842 626 ntBASIC4.26□□□□□ -1.73
Rnf43Q5NCP0 AC091783.5-201ENSMUST00000224928 671 ntBASIC4.26□□□□□ -1.73
Rnf43Q5NCP0 n-R5s54-201ENSMUST00000083837 112 ntBASIC4.26□□□□□ -1.73
Rnf43Q5NCP0 Gm7381-201ENSMUST00000098958 300 ntBASIC4.26□□□□□ -1.73
Rnf43Q5NCP0 Gm38235-201ENSMUST00000194600 4952 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 101.1 ms