Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Gm22159-201ENSMUST00000158412 130 ntBASIC2.35□□□□□ -2.03
Usp28Q5I043 Gm24546-201ENSMUST00000158652 102 ntBASIC2.35□□□□□ -2.03
Usp28Q5I043 Gm23342-201ENSMUST00000158958 115 ntBASIC2.35□□□□□ -2.03
Usp28Q5I043 Gm6788-201ENSMUST00000166459 270 ntBASIC2.35□□□□□ -2.03
Usp28Q5I043 Gm26195-201ENSMUST00000175035 101 ntBASIC2.35□□□□□ -2.03
Usp28Q5I043 Gm43582-201ENSMUST00000196149 343 ntBASIC2.35□□□□□ -2.03
Usp28Q5I043 Gm43556-201ENSMUST00000196186 681 ntBASIC2.35□□□□□ -2.03
Usp28Q5I043 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.35□□□□□ -2.03
Usp28Q5I043 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Usp28Q5I043 Gm22061-201ENSMUST00000082557 107 ntBASIC2.35□□□□□ -2.03
Usp28Q5I043 Gm22508-201ENSMUST00000082772 110 ntBASIC2.35□□□□□ -2.03
Usp28Q5I043 Mir103-2-201ENSMUST00000083629 86 ntBASIC2.35□□□□□ -2.03
Usp28Q5I043 Mir465c-1-201ENSMUST00000093560 81 ntBASIC2.35□□□□□ -2.03
Usp28Q5I043 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
Usp28Q5I043 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
Usp28Q5I043 Mir669p-2-201ENSMUST00000103868 87 ntBASIC2.34□□□□□ -2.03
Usp28Q5I043 Mir669p-1-201ENSMUST00000103884 87 ntBASIC2.34□□□□□ -2.03
Usp28Q5I043 Gm22709-201ENSMUST00000116893 111 ntBASIC2.34□□□□□ -2.03
Usp28Q5I043 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC2.34□□□□□ -2.03
Usp28Q5I043 Gm15936-201ENSMUST00000118706 460 ntBASIC2.34□□□□□ -2.03
Usp28Q5I043 Gm8217-201ENSMUST00000119136 465 ntBASIC2.34□□□□□ -2.03
Usp28Q5I043 Gm11598-201ENSMUST00000119257 357 ntBASIC2.34□□□□□ -2.03
Usp28Q5I043 Gm14940-201ENSMUST00000119309 495 ntBASIC2.34□□□□□ -2.03
Usp28Q5I043 Gm13541-201ENSMUST00000119519 283 ntBASIC2.34□□□□□ -2.03
Usp28Q5I043 Gm11991-201ENSMUST00000119652 1074 ntBASIC2.34□□□□□ -2.03
Usp28Q5I043 Gm23206-201ENSMUST00000122720 184 ntBASIC2.34□□□□□ -2.03
Usp28Q5I043 Gm26393-201ENSMUST00000157625 129 ntBASIC2.34□□□□□ -2.03
Usp28Q5I043 Gm26214-201ENSMUST00000158581 107 ntBASIC2.34□□□□□ -2.03
Usp28Q5I043 Gm22076-201ENSMUST00000158601 84 ntBASIC2.34□□□□□ -2.03
Usp28Q5I043 Gm23059-201ENSMUST00000158978 107 ntBASIC2.34□□□□□ -2.03
Usp28Q5I043 Gm22500-201ENSMUST00000158982 99 ntBASIC2.34□□□□□ -2.03
Usp28Q5I043 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Usp28Q5I043 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC2.34□□□□□ -2.03
Usp28Q5I043 Mir8106-201ENSMUST00000184520 139 ntBASIC2.34□□□□□ -2.03
Usp28Q5I043 Gm5116-201ENSMUST00000187732 463 ntBASIC2.34□□□□□ -2.03
Usp28Q5I043 Gm29627-201ENSMUST00000187984 463 ntBASIC2.34□□□□□ -2.03
Usp28Q5I043 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC2.34□□□□□ -2.03
Usp28Q5I043 Gm19089-201ENSMUST00000197207 613 ntBASIC2.34□□□□□ -2.03
Usp28Q5I043 Gm43083-201ENSMUST00000199594 476 ntBASIC2.34□□□□□ -2.03
Usp28Q5I043 Gm6796-201ENSMUST00000211919 243 ntBASIC2.34□□□□□ -2.03
Usp28Q5I043 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Usp28Q5I043 Gm2628-201ENSMUST00000218019 426 ntBASIC2.34□□□□□ -2.03
Usp28Q5I043 CT030662.1-201ENSMUST00000227380 232 ntBASIC2.34□□□□□ -2.03
Usp28Q5I043 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.34□□□□□ -2.03
Usp28Q5I043 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.34□□□□□ -2.03
Usp28Q5I043 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Usp28Q5I043 Gm23650-201ENSMUST00000083355 70 ntBASIC2.34□□□□□ -2.03
Usp28Q5I043 Mir127-201ENSMUST00000093568 70 ntBASIC2.34□□□□□ -2.03
Usp28Q5I043 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC2.34□□□□□ -2.03
Usp28Q5I043 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
Usp28Q5I043 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
Usp28Q5I043 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.34□□□□□ -2.04
Usp28Q5I043 Gm44049-201ENSMUST00000204905 2984 ntBASIC2.34□□□□□ -2.04
Usp28Q5I043 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Usp28Q5I043 Snord116l9-201ENSMUST00000101891 94 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Gm26504-201ENSMUST00000102033 94 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC2.33□□□□□ -2.04
Usp28Q5I043 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC2.33□□□□□ -2.04
Usp28Q5I043 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC2.33□□□□□ -2.04
Usp28Q5I043 Gm17132-201ENSMUST00000109542 1158 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Gm14417-201ENSMUST00000120036 1074 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Gm24959-201ENSMUST00000157924 146 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Usp28Q5I043 Gm20698-201ENSMUST00000175657 233 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC2.33□□□□□ -2.04
Usp28Q5I043 Gm26502-201ENSMUST00000177732 94 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Snord116l13-201ENSMUST00000177737 94 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Gm25350-201ENSMUST00000177849 94 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Snord116l15-201ENSMUST00000177940 94 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Gm23446-201ENSMUST00000177977 94 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Snord116l4-201ENSMUST00000177982 94 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Gm26201-201ENSMUST00000178047 94 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Gm24711-201ENSMUST00000178062 94 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Gm24609-201ENSMUST00000178166 94 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Gm23265-201ENSMUST00000178321 94 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Gm22812-201ENSMUST00000178329 94 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Snord116l3-201ENSMUST00000178370 94 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Gm26246-201ENSMUST00000178388 94 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Gm25155-201ENSMUST00000178450 94 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Gm24760-201ENSMUST00000178530 94 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Gm22285-201ENSMUST00000178576 94 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Gm22417-201ENSMUST00000178656 94 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Snord116l2-201ENSMUST00000178675 94 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Gm26270-201ENSMUST00000178690 94 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Snord116l16-201ENSMUST00000178777 94 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Gm23313-201ENSMUST00000178931 94 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Snord116l17-201ENSMUST00000178936 94 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Gm23089-201ENSMUST00000178947 94 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Snord116l10-201ENSMUST00000179053 94 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Gm24153-201ENSMUST00000179280 94 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Gm25597-201ENSMUST00000179388 94 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Gm23860-201ENSMUST00000179446 132 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Snord116l1-201ENSMUST00000179518 94 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Gm25816-201ENSMUST00000179764 94 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Snord116l8-201ENSMUST00000179889 94 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Snord116l7-201ENSMUST00000179895 94 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Snord116l5-201ENSMUST00000179927 94 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Snord116l6-201ENSMUST00000179955 94 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Gm26188-201ENSMUST00000179963 94 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Gm26433-201ENSMUST00000180227 94 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms