Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Ccdc88bQ4QRL3 Gm6954-201ENSMUST00000117416 225 ntBASIC1.4□□□□□ -2.19
Ccdc88bQ4QRL3 Gm14940-201ENSMUST00000119309 495 ntBASIC1.4□□□□□ -2.19
Ccdc88bQ4QRL3 Gm20386-201ENSMUST00000174010 132 ntBASIC1.4□□□□□ -2.19
Ccdc88bQ4QRL3 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.4□□□□□ -2.19
Ccdc88bQ4QRL3 Gm34701-202ENSMUST00000204685 360 ntBASIC1.4□□□□□ -2.19
Ccdc88bQ4QRL3 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.39□□□□□ -2.19
Ccdc88bQ4QRL3 Gm26352-201ENSMUST00000158223 125 ntBASIC1.39□□□□□ -2.19
Ccdc88bQ4QRL3 Gm16546-201ENSMUST00000159442 355 ntBASIC1.39□□□□□ -2.19
Ccdc88bQ4QRL3 Mir3109-201ENSMUST00000175301 88 ntBASIC1.39□□□□□ -2.19
Ccdc88bQ4QRL3 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Ccdc88bQ4QRL3 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.39□□□□□ -2.19
Ccdc88bQ4QRL3 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC1.38□□□□□ -2.19
Ccdc88bQ4QRL3 Gm14069-201ENSMUST00000120815 229 ntBASIC1.38□□□□□ -2.19
Ccdc88bQ4QRL3 Gm23324-201ENSMUST00000157421 131 ntBASIC1.38□□□□□ -2.19
Ccdc88bQ4QRL3 Gm34015-201ENSMUST00000194908 451 ntBASIC1.38□□□□□ -2.19
Ccdc88bQ4QRL3 Gm9373-201ENSMUST00000208724 599 ntBASIC1.38□□□□□ -2.19
Ccdc88bQ4QRL3 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC1.38□□□□□ -2.19
Ccdc88bQ4QRL3 Gm14835-201ENSMUST00000119039 315 ntBASIC1.37□□□□□ -2.19
Ccdc88bQ4QRL3 Gm26186-201ENSMUST00000157689 125 ntBASIC1.37□□□□□ -2.19
Ccdc88bQ4QRL3 Gm24768-201ENSMUST00000158512 94 ntBASIC1.37□□□□□ -2.19
Ccdc88bQ4QRL3 Gm43316-201ENSMUST00000197252 1295 ntBASIC1.37□□□□□ -2.19
Ccdc88bQ4QRL3 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC1.37□□□□□ -2.19
Ccdc88bQ4QRL3 AC161758.2-201ENSMUST00000228513 218 ntBASIC1.37□□□□□ -2.19
Ccdc88bQ4QRL3 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Ccdc88bQ4QRL3 AC164164.1-201ENSMUST00000223245 2340 ntBASIC1.37□□□□□ -2.19
Ccdc88bQ4QRL3 Snord13-201ENSMUST00000157627 104 ntBASIC1.37□□□□□ -2.19
Ccdc88bQ4QRL3 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC1.37□□□□□ -2.19
Ccdc88bQ4QRL3 Gm22151-201ENSMUST00000116963 58 ntBASIC1.36□□□□□ -2.19
Ccdc88bQ4QRL3 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC1.36□□□□□ -2.19
Ccdc88bQ4QRL3 Gm22088-201ENSMUST00000158341 117 ntBASIC1.36□□□□□ -2.19
Ccdc88bQ4QRL3 Gm29550-201ENSMUST00000185543 285 ntBASIC1.36□□□□□ -2.19
Ccdc88bQ4QRL3 Gm17937-201ENSMUST00000197908 742 ntBASIC1.36□□□□□ -2.19
Ccdc88bQ4QRL3 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC1.36□□□□□ -2.19
Ccdc88bQ4QRL3 Gm14786-201ENSMUST00000117127 944 ntBASIC1.35□□□□□ -2.19
Ccdc88bQ4QRL3 Gm12646-201ENSMUST00000119144 238 ntBASIC1.35□□□□□ -2.19
Ccdc88bQ4QRL3 Gm2930-201ENSMUST00000170403 474 ntBASIC1.35□□□□□ -2.19
Ccdc88bQ4QRL3 Gm12155-201ENSMUST00000121267 160 ntBASIC1.34□□□□□ -2.19
Ccdc88bQ4QRL3 Gm22447-201ENSMUST00000158155 92 ntBASIC1.34□□□□□ -2.19
Ccdc88bQ4QRL3 Gm23020-201ENSMUST00000158766 253 ntBASIC1.34□□□□□ -2.19
Ccdc88bQ4QRL3 Gm18611-201ENSMUST00000200334 1118 ntBASIC1.34□□□□□ -2.19
Ccdc88bQ4QRL3 CT010480.5-201ENSMUST00000225026 217 ntBASIC1.34□□□□□ -2.19
Ccdc88bQ4QRL3 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
Ccdc88bQ4QRL3 Mir223-201ENSMUST00000102112 110 ntBASIC1.33□□□□□ -2.2
Ccdc88bQ4QRL3 Mir290a-201ENSMUST00000104627 83 ntBASIC1.33□□□□□ -2.2
Ccdc88bQ4QRL3 Gm11898-201ENSMUST00000117161 385 ntBASIC1.33□□□□□ -2.2
Ccdc88bQ4QRL3 Gm14039-201ENSMUST00000118705 101 ntBASIC1.33□□□□□ -2.2
Ccdc88bQ4QRL3 Gm11359-201ENSMUST00000120039 567 ntBASIC1.33□□□□□ -2.2
Ccdc88bQ4QRL3 Gm25368-201ENSMUST00000158847 131 ntBASIC1.33□□□□□ -2.2
Ccdc88bQ4QRL3 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.33□□□□□ -2.2
Ccdc88bQ4QRL3 Gm19057-201ENSMUST00000194329 1197 ntBASIC1.33□□□□□ -2.2
Ccdc88bQ4QRL3 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
Ccdc88bQ4QRL3 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC1.33□□□□□ -2.2
Ccdc88bQ4QRL3 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.33□□□□□ -2.2
Ccdc88bQ4QRL3 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.33□□□□□ -2.2
Ccdc88bQ4QRL3 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
Ccdc88bQ4QRL3 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
Ccdc88bQ4QRL3 Gm26285-201ENSMUST00000177923 107 ntBASIC1.32□□□□□ -2.2
Ccdc88bQ4QRL3 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC1.32□□□□□ -2.2
Ccdc88bQ4QRL3 Gm43541-201ENSMUST00000197208 581 ntBASIC1.32□□□□□ -2.2
Ccdc88bQ4QRL3 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.32□□□□□ -2.2
Ccdc88bQ4QRL3 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC1.32□□□□□ -2.2
Ccdc88bQ4QRL3 Gm23622-201ENSMUST00000082460 107 ntBASIC1.32□□□□□ -2.2
Ccdc88bQ4QRL3 Gm22507-201ENSMUST00000082773 160 ntBASIC1.32□□□□□ -2.2
Ccdc88bQ4QRL3 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
Ccdc88bQ4QRL3 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC1.31□□□□□ -2.2
Ccdc88bQ4QRL3 Gm27977-201ENSMUST00000185159 111 ntBASIC1.31□□□□□ -2.2
Ccdc88bQ4QRL3 Gm45616-201ENSMUST00000211711 319 ntBASIC1.31□□□□□ -2.2
Ccdc88bQ4QRL3 Gm23735-201ENSMUST00000082551 134 ntBASIC1.31□□□□□ -2.2
Ccdc88bQ4QRL3 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Ccdc88bQ4QRL3 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
Ccdc88bQ4QRL3 Gm13366-201ENSMUST00000122198 970 ntBASIC1.31□□□□□ -2.2
Ccdc88bQ4QRL3 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC1.31□□□□□ -2.2
Ccdc88bQ4QRL3 Mir6389-201ENSMUST00000183661 102 ntBASIC1.31□□□□□ -2.2
Ccdc88bQ4QRL3 Gm27582-201ENSMUST00000184084 126 ntBASIC1.31□□□□□ -2.2
Ccdc88bQ4QRL3 Gm3010-201ENSMUST00000198805 448 ntBASIC1.31□□□□□ -2.2
Ccdc88bQ4QRL3 Gm29754-201ENSMUST00000206269 358 ntBASIC1.31□□□□□ -2.2
Ccdc88bQ4QRL3 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC1.31□□□□□ -2.2
Ccdc88bQ4QRL3 Gm24258-201ENSMUST00000083739 133 ntBASIC1.31□□□□□ -2.2
Ccdc88bQ4QRL3 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
Ccdc88bQ4QRL3 Gm15692-201ENSMUST00000152173 352 ntBASIC1.3□□□□□ -2.2
Ccdc88bQ4QRL3 Gm21737-201ENSMUST00000178112 664 ntBASIC1.3□□□□□ -2.2
Ccdc88bQ4QRL3 Gm21729-201ENSMUST00000180058 664 ntBASIC1.3□□□□□ -2.2
Ccdc88bQ4QRL3 Gm21853-201ENSMUST00000180071 664 ntBASIC1.3□□□□□ -2.2
Ccdc88bQ4QRL3 Gm20901-201ENSMUST00000180177 664 ntBASIC1.3□□□□□ -2.2
Ccdc88bQ4QRL3 Gm29073-201ENSMUST00000185563 664 ntBASIC1.3□□□□□ -2.2
Ccdc88bQ4QRL3 Gm29495-201ENSMUST00000189319 664 ntBASIC1.3□□□□□ -2.2
Ccdc88bQ4QRL3 Gm28090-201ENSMUST00000189458 664 ntBASIC1.3□□□□□ -2.2
Ccdc88bQ4QRL3 Gm21647-201ENSMUST00000189755 664 ntBASIC1.3□□□□□ -2.2
Ccdc88bQ4QRL3 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.3□□□□□ -2.2
Ccdc88bQ4QRL3 Gm29165-201ENSMUST00000190655 664 ntBASIC1.3□□□□□ -2.2
Ccdc88bQ4QRL3 Gm29211-201ENSMUST00000191470 664 ntBASIC1.3□□□□□ -2.2
Ccdc88bQ4QRL3 Ighv12-2-201ENSMUST00000191949 362 ntBASIC1.3□□□□□ -2.2
Ccdc88bQ4QRL3 Gm36891-201ENSMUST00000191995 655 ntBASIC1.3□□□□□ -2.2
Ccdc88bQ4QRL3 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC1.3□□□□□ -2.2
Ccdc88bQ4QRL3 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC1.3□□□□□ -2.2
Ccdc88bQ4QRL3 Mir93-201ENSMUST00000083593 88 ntBASIC1.3□□□□□ -2.2
Ccdc88bQ4QRL3 Gm14670-201ENSMUST00000117327 337 ntBASIC1.29□□□□□ -2.2
Ccdc88bQ4QRL3 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC1.29□□□□□ -2.2
Ccdc88bQ4QRL3 Gm22315-201ENSMUST00000158010 143 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms