Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC2.1□□□□□ -2.07
Shank3Q4ACU6 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Shank3Q4ACU6 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC2.1□□□□□ -2.07
Shank3Q4ACU6 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC2.1□□□□□ -2.07
Shank3Q4ACU6 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Shank3Q4ACU6 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC2.1□□□□□ -2.07
Shank3Q4ACU6 Gm6651-201ENSMUST00000189471 271 ntBASIC2.1□□□□□ -2.07
Shank3Q4ACU6 Gm37576-201ENSMUST00000194228 372 ntBASIC2.1□□□□□ -2.07
Shank3Q4ACU6 Gm19649-201ENSMUST00000201126 822 ntBASIC2.1□□□□□ -2.07
Shank3Q4ACU6 Gm29920-201ENSMUST00000206876 754 ntBASIC2.1□□□□□ -2.07
Shank3Q4ACU6 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
Shank3Q4ACU6 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.1□□□□□ -2.07
Shank3Q4ACU6 AC162934.3-201ENSMUST00000223015 841 ntBASIC2.1□□□□□ -2.07
Shank3Q4ACU6 AC101945.3-201ENSMUST00000226568 153 ntBASIC2.1□□□□□ -2.07
Shank3Q4ACU6 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Shank3Q4ACU6 Gm23249-201ENSMUST00000083369 161 ntBASIC2.1□□□□□ -2.07
Shank3Q4ACU6 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Shank3Q4ACU6 Mir343-201ENSMUST00000102360 75 ntBASIC2.09□□□□□ -2.07
Shank3Q4ACU6 Mir599-201ENSMUST00000102378 88 ntBASIC2.09□□□□□ -2.07
Shank3Q4ACU6 Gm11367-201ENSMUST00000117802 120 ntBASIC2.09□□□□□ -2.07
Shank3Q4ACU6 Gm2005-201ENSMUST00000120759 542 ntBASIC2.09□□□□□ -2.07
Shank3Q4ACU6 Snrpert-201ENSMUST00000121967 279 ntBASIC2.09□□□□□ -2.07
Shank3Q4ACU6 Gm25666-201ENSMUST00000157702 107 ntBASIC2.09□□□□□ -2.07
Shank3Q4ACU6 Gm24546-201ENSMUST00000158652 102 ntBASIC2.09□□□□□ -2.07
Shank3Q4ACU6 Gm37778-201ENSMUST00000191732 190 ntBASIC2.09□□□□□ -2.07
Shank3Q4ACU6 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC2.09□□□□□ -2.07
Shank3Q4ACU6 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC2.09□□□□□ -2.07
Shank3Q4ACU6 Mir7021-201ENSMUST00000197026 63 ntBASIC2.09□□□□□ -2.07
Shank3Q4ACU6 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC2.09□□□□□ -2.07
Shank3Q4ACU6 Gm35558-202ENSMUST00000221819 499 ntBASIC2.09□□□□□ -2.07
Shank3Q4ACU6 AC139350.4-201ENSMUST00000228483 798 ntBASIC2.09□□□□□ -2.07
Shank3Q4ACU6 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Shank3Q4ACU6 Gm22578-201ENSMUST00000083730 107 ntBASIC2.09□□□□□ -2.07
Shank3Q4ACU6 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC2.09□□□□□ -2.07
Shank3Q4ACU6 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Shank3Q4ACU6 Mir706-201ENSMUST00000102262 84 ntBASIC2.08□□□□□ -2.08
Shank3Q4ACU6 Gm6664-201ENSMUST00000119138 468 ntBASIC2.08□□□□□ -2.08
Shank3Q4ACU6 Gm2318-201ENSMUST00000119623 639 ntBASIC2.08□□□□□ -2.08
Shank3Q4ACU6 Gm13239-201ENSMUST00000119920 637 ntBASIC2.08□□□□□ -2.08
Shank3Q4ACU6 Gm12640-201ENSMUST00000120097 310 ntBASIC2.08□□□□□ -2.08
Shank3Q4ACU6 Gm2768-201ENSMUST00000121062 250 ntBASIC2.08□□□□□ -2.08
Shank3Q4ACU6 Gm5958-201ENSMUST00000147698 297 ntBASIC2.08□□□□□ -2.08
Shank3Q4ACU6 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC2.08□□□□□ -2.08
Shank3Q4ACU6 Gm7438-201ENSMUST00000177664 639 ntBASIC2.08□□□□□ -2.08
Shank3Q4ACU6 Gm7408-201ENSMUST00000178014 639 ntBASIC2.08□□□□□ -2.08
Shank3Q4ACU6 Gm7386-201ENSMUST00000178020 639 ntBASIC2.08□□□□□ -2.08
Shank3Q4ACU6 Gm3657-201ENSMUST00000178170 639 ntBASIC2.08□□□□□ -2.08
Shank3Q4ACU6 Gm7415-201ENSMUST00000178205 639 ntBASIC2.08□□□□□ -2.08
Shank3Q4ACU6 Gm7398-201ENSMUST00000178589 639 ntBASIC2.08□□□□□ -2.08
Shank3Q4ACU6 Gm7391-201ENSMUST00000178680 639 ntBASIC2.08□□□□□ -2.08
Shank3Q4ACU6 Gm7375-201ENSMUST00000179232 639 ntBASIC2.08□□□□□ -2.08
Shank3Q4ACU6 Gm3681-201ENSMUST00000179940 639 ntBASIC2.08□□□□□ -2.08
Shank3Q4ACU6 Mir6383-201ENSMUST00000184545 116 ntBASIC2.08□□□□□ -2.08
Shank3Q4ACU6 Gm18729-201ENSMUST00000217230 621 ntBASIC2.08□□□□□ -2.08
Shank3Q4ACU6 AC069561.3-201ENSMUST00000217321 114 ntBASIC2.08□□□□□ -2.08
Shank3Q4ACU6 Gm25796-201ENSMUST00000082645 163 ntBASIC2.08□□□□□ -2.08
Shank3Q4ACU6 Gm25792-201ENSMUST00000083289 100 ntBASIC2.08□□□□□ -2.08
Shank3Q4ACU6 Gm7869-201ENSMUST00000121457 1322 ntBASIC2.08□□□□□ -2.08
Shank3Q4ACU6 Gm20541-201ENSMUST00000173035 1406 ntBASIC2.08□□□□□ -2.08
Shank3Q4ACU6 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Shank3Q4ACU6 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Shank3Q4ACU6 Gm15176-201ENSMUST00000117734 135 ntBASIC2.08□□□□□ -2.08
Shank3Q4ACU6 Gm13510-201ENSMUST00000118659 429 ntBASIC2.08□□□□□ -2.08
Shank3Q4ACU6 Gm6587-201ENSMUST00000120219 613 ntBASIC2.08□□□□□ -2.08
Shank3Q4ACU6 Gm15719-201ENSMUST00000120619 635 ntBASIC2.08□□□□□ -2.08
Shank3Q4ACU6 Gm15147-201ENSMUST00000122263 483 ntBASIC2.08□□□□□ -2.08
Shank3Q4ACU6 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC2.08□□□□□ -2.08
Shank3Q4ACU6 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Shank3Q4ACU6 Gm22565-201ENSMUST00000175540 69 ntBASIC2.08□□□□□ -2.08
Shank3Q4ACU6 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC2.08□□□□□ -2.08
Shank3Q4ACU6 Gm37438-201ENSMUST00000192813 393 ntBASIC2.08□□□□□ -2.08
Shank3Q4ACU6 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Shank3Q4ACU6 AL929285.1-201ENSMUST00000215522 229 ntBASIC2.08□□□□□ -2.08
Shank3Q4ACU6 AC153506.2-201ENSMUST00000218051 257 ntBASIC2.08□□□□□ -2.08
Shank3Q4ACU6 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.08□□□□□ -2.08
Shank3Q4ACU6 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Shank3Q4ACU6 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC2.08□□□□□ -2.08
Shank3Q4ACU6 Gm18360-201ENSMUST00000173327 1524 ntBASIC2.08□□□□□ -2.08
Shank3Q4ACU6 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC2.07□□□□□ -2.08
Shank3Q4ACU6 Gm13714-201ENSMUST00000117313 221 ntBASIC2.07□□□□□ -2.08
Shank3Q4ACU6 Gm14923-201ENSMUST00000118270 155 ntBASIC2.07□□□□□ -2.08
Shank3Q4ACU6 Gm23783-201ENSMUST00000157941 102 ntBASIC2.07□□□□□ -2.08
Shank3Q4ACU6 Gm23032-201ENSMUST00000157995 107 ntBASIC2.07□□□□□ -2.08
Shank3Q4ACU6 Gm3102-201ENSMUST00000164236 489 ntBASIC2.07□□□□□ -2.08
Shank3Q4ACU6 Trbv12-3-201ENSMUST00000192675 372 ntBASIC2.07□□□□□ -2.08
Shank3Q4ACU6 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC2.07□□□□□ -2.08
Shank3Q4ACU6 Gm45742-201ENSMUST00000212400 433 ntBASIC2.07□□□□□ -2.08
Shank3Q4ACU6 AL929265.1-201ENSMUST00000213427 125 ntBASIC2.07□□□□□ -2.08
Shank3Q4ACU6 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC2.07□□□□□ -2.08
Shank3Q4ACU6 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.07□□□□□ -2.08
Shank3Q4ACU6 AC154506.3-201ENSMUST00000225417 213 ntBASIC2.07□□□□□ -2.08
Shank3Q4ACU6 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Shank3Q4ACU6 Gm10038-201ENSMUST00000077233 441 ntBASIC2.07□□□□□ -2.08
Shank3Q4ACU6 Mir10b-201ENSMUST00000083566 68 ntBASIC2.07□□□□□ -2.08
Shank3Q4ACU6 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Shank3Q4ACU6 Gm23015-201ENSMUST00000104145 128 ntBASIC2.06□□□□□ -2.08
Shank3Q4ACU6 Gm16431-201ENSMUST00000117454 431 ntBASIC2.06□□□□□ -2.08
Shank3Q4ACU6 Gm14358-201ENSMUST00000118458 403 ntBASIC2.06□□□□□ -2.08
Shank3Q4ACU6 Gm12934-201ENSMUST00000119221 343 ntBASIC2.06□□□□□ -2.08
Shank3Q4ACU6 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC2.06□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 155.5 ms