Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC2.56□□□□□ -2
Trim40Q3UWA4 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC2.56□□□□□ -2
Trim40Q3UWA4 Gm24443-201ENSMUST00000157242 132 ntBASIC2.56□□□□□ -2
Trim40Q3UWA4 Gm24546-201ENSMUST00000158652 102 ntBASIC2.56□□□□□ -2
Trim40Q3UWA4 Gm23704-201ENSMUST00000158844 340 ntBASIC2.56□□□□□ -2
Trim40Q3UWA4 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.56□□□□□ -2
Trim40Q3UWA4 Mir6341-201ENSMUST00000183490 121 ntBASIC2.56□□□□□ -2
Trim40Q3UWA4 Gm27490-201ENSMUST00000184754 128 ntBASIC2.56□□□□□ -2
Trim40Q3UWA4 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC2.56□□□□□ -2
Trim40Q3UWA4 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC2.56□□□□□ -2
Trim40Q3UWA4 Gm43932-201ENSMUST00000204499 52 ntBASIC2.56□□□□□ -2
Trim40Q3UWA4 Gm44478-201ENSMUST00000204875 114 ntBASIC2.56□□□□□ -2
Trim40Q3UWA4 Gm45860-201ENSMUST00000212700 334 ntBASIC2.56□□□□□ -2
Trim40Q3UWA4 CT025526.1-201ENSMUST00000217327 267 ntBASIC2.56□□□□□ -2
Trim40Q3UWA4 AC159203.2-201ENSMUST00000221326 193 ntBASIC2.56□□□□□ -2
Trim40Q3UWA4 AC129202.3-201ENSMUST00000224413 733 ntBASIC2.56□□□□□ -2
Trim40Q3UWA4 AC107757.3-201ENSMUST00000226312 535 ntBASIC2.56□□□□□ -2
Trim40Q3UWA4 AC183096.1-201ENSMUST00000226392 130 ntBASIC2.56□□□□□ -2
Trim40Q3UWA4 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Trim40Q3UWA4 Gm23096-201ENSMUST00000083447 107 ntBASIC2.56□□□□□ -2
Trim40Q3UWA4 Gm23093-201ENSMUST00000083450 102 ntBASIC2.56□□□□□ -2
Trim40Q3UWA4 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Trim40Q3UWA4 AC124561.2-201ENSMUST00000226657 1973 ntBASIC2.56□□□□□ -2
Trim40Q3UWA4 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trim40Q3UWA4 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.55□□□□□ -2
Trim40Q3UWA4 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.55□□□□□ -2
Trim40Q3UWA4 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
Trim40Q3UWA4 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC2.55□□□□□ -2
Trim40Q3UWA4 Gm9043-201ENSMUST00000119677 314 ntBASIC2.55□□□□□ -2
Trim40Q3UWA4 Gm14392-201ENSMUST00000120332 401 ntBASIC2.55□□□□□ -2
Trim40Q3UWA4 Gm14736-201ENSMUST00000121470 336 ntBASIC2.55□□□□□ -2
Trim40Q3UWA4 Gm11229-201ENSMUST00000121993 437 ntBASIC2.55□□□□□ -2
Trim40Q3UWA4 Gm14413-201ENSMUST00000122158 408 ntBASIC2.55□□□□□ -2
Trim40Q3UWA4 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.55□□□□□ -2
Trim40Q3UWA4 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.55□□□□□ -2
Trim40Q3UWA4 Gm26275-201ENSMUST00000157101 268 ntBASIC2.55□□□□□ -2
Trim40Q3UWA4 Gm23667-201ENSMUST00000157466 120 ntBASIC2.55□□□□□ -2
Trim40Q3UWA4 Gm24681-201ENSMUST00000158760 107 ntBASIC2.55□□□□□ -2
Trim40Q3UWA4 Cfap61-214ENSMUST00000167179 183 ntBASIC2.55□□□□□ -2
Trim40Q3UWA4 Gm24813-201ENSMUST00000175310 84 ntBASIC2.55□□□□□ -2
Trim40Q3UWA4 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC2.55□□□□□ -2
Trim40Q3UWA4 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC2.55□□□□□ -2
Trim40Q3UWA4 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC2.55□□□□□ -2
Trim40Q3UWA4 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC2.55□□□□□ -2
Trim40Q3UWA4 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
Trim40Q3UWA4 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.55□□□□□ -2
Trim40Q3UWA4 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC2.55□□□□□ -2
Trim40Q3UWA4 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC2.55□□□□□ -2
Trim40Q3UWA4 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Trim40Q3UWA4 Gm25853-201ENSMUST00000082793 132 ntBASIC2.55□□□□□ -2
Trim40Q3UWA4 Gm26458-201ENSMUST00000082832 128 ntBASIC2.55□□□□□ -2
Trim40Q3UWA4 Gm24045-201ENSMUST00000083113 98 ntBASIC2.55□□□□□ -2
Trim40Q3UWA4 Gm26263-201ENSMUST00000083281 164 ntBASIC2.55□□□□□ -2
Trim40Q3UWA4 Gm23249-201ENSMUST00000083369 161 ntBASIC2.55□□□□□ -2
Trim40Q3UWA4 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC2.55□□□□□ -2
Trim40Q3UWA4 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trim40Q3UWA4 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.55□□□□□ -2
Trim40Q3UWA4 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC2.54□□□□□ -2
Trim40Q3UWA4 Gm44821-201ENSMUST00000208212 2002 ntBASIC2.54□□□□□ -2
Trim40Q3UWA4 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Trim40Q3UWA4 Gm22936-201ENSMUST00000103955 126 ntBASIC2.54□□□□□ -2
Trim40Q3UWA4 Gm13728-201ENSMUST00000117471 400 ntBASIC2.54□□□□□ -2
Trim40Q3UWA4 Gm13085-201ENSMUST00000118356 171 ntBASIC2.54□□□□□ -2
Trim40Q3UWA4 Gm16411-201ENSMUST00000122164 1100 ntBASIC2.54□□□□□ -2
Trim40Q3UWA4 Gm14389-201ENSMUST00000140453 241 ntBASIC2.54□□□□□ -2
Trim40Q3UWA4 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC2.54□□□□□ -2
Trim40Q3UWA4 Gm6788-201ENSMUST00000166459 270 ntBASIC2.54□□□□□ -2
Trim40Q3UWA4 Gm24082-201ENSMUST00000175175 83 ntBASIC2.54□□□□□ -2
Trim40Q3UWA4 Mir5099-201ENSMUST00000175257 74 ntBASIC2.54□□□□□ -2
Trim40Q3UWA4 Gm27317-201ENSMUST00000183533 95 ntBASIC2.54□□□□□ -2
Trim40Q3UWA4 Mir6371-201ENSMUST00000184470 111 ntBASIC2.54□□□□□ -2
Trim40Q3UWA4 Ighv12-1-201ENSMUST00000195542 329 ntBASIC2.54□□□□□ -2
Trim40Q3UWA4 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC2.54□□□□□ -2
Trim40Q3UWA4 Gm44555-201ENSMUST00000209008 148 ntBASIC2.54□□□□□ -2
Trim40Q3UWA4 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC2.54□□□□□ -2
Trim40Q3UWA4 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
Trim40Q3UWA4 AC138401.1-201ENSMUST00000221533 116 ntBASIC2.54□□□□□ -2
Trim40Q3UWA4 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC2.54□□□□□ -2
Trim40Q3UWA4 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.54□□□□□ -2
Trim40Q3UWA4 Ear14-201ENSMUST00000049559 468 ntBASIC2.54□□□□□ -2
Trim40Q3UWA4 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trim40Q3UWA4 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trim40Q3UWA4 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC2.54□□□□□ -2
Trim40Q3UWA4 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Trim40Q3UWA4 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Trim40Q3UWA4 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Trim40Q3UWA4 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC2.53□□□□□ -2
Trim40Q3UWA4 Gm12386-201ENSMUST00000117380 688 ntBASIC2.53□□□□□ -2
Trim40Q3UWA4 Gm15106-201ENSMUST00000119691 821 ntBASIC2.53□□□□□ -2
Trim40Q3UWA4 Gm26194-201ENSMUST00000175036 71 ntBASIC2.53□□□□□ -2
Trim40Q3UWA4 Gm24168-201ENSMUST00000178825 107 ntBASIC2.53□□□□□ -2
Trim40Q3UWA4 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC2.53□□□□□ -2
Trim40Q3UWA4 Gm5224-201ENSMUST00000183060 350 ntBASIC2.53□□□□□ -2
Trim40Q3UWA4 Mir6335-201ENSMUST00000184081 98 ntBASIC2.53□□□□□ -2
Trim40Q3UWA4 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC2.53□□□□□ -2
Trim40Q3UWA4 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC2.53□□□□□ -2
Trim40Q3UWA4 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC2.53□□□□□ -2
Trim40Q3UWA4 Gm9227-201ENSMUST00000194733 566 ntBASIC2.53□□□□□ -2
Trim40Q3UWA4 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.53□□□□□ -2
Trim40Q3UWA4 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms