Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm14073-201ENSMUST00000117344 381 ntBASIC2.32□□□□□ -2.04
Upf3aQ3ULJ3 Gm12102-201ENSMUST00000118251 604 ntBASIC2.32□□□□□ -2.04
Upf3aQ3ULJ3 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC2.32□□□□□ -2.04
Upf3aQ3ULJ3 Gm14867-201ENSMUST00000120156 866 ntBASIC2.32□□□□□ -2.04
Upf3aQ3ULJ3 Gm12825-201ENSMUST00000120249 563 ntBASIC2.32□□□□□ -2.04
Upf3aQ3ULJ3 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC2.32□□□□□ -2.04
Upf3aQ3ULJ3 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC2.32□□□□□ -2.04
Upf3aQ3ULJ3 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC2.32□□□□□ -2.04
Upf3aQ3ULJ3 Gm23033-201ENSMUST00000157996 134 ntBASIC2.32□□□□□ -2.04
Upf3aQ3ULJ3 Gm24177-201ENSMUST00000158927 131 ntBASIC2.32□□□□□ -2.04
Upf3aQ3ULJ3 Gm17064-201ENSMUST00000167690 452 ntBASIC2.32□□□□□ -2.04
Upf3aQ3ULJ3 Gm24813-201ENSMUST00000175310 84 ntBASIC2.32□□□□□ -2.04
Upf3aQ3ULJ3 Gm25451-201ENSMUST00000177832 121 ntBASIC2.32□□□□□ -2.04
Upf3aQ3ULJ3 Gm23568-201ENSMUST00000177960 92 ntBASIC2.32□□□□□ -2.04
Upf3aQ3ULJ3 Gm24829-201ENSMUST00000179245 92 ntBASIC2.32□□□□□ -2.04
Upf3aQ3ULJ3 Gm26189-201ENSMUST00000179879 107 ntBASIC2.32□□□□□ -2.04
Upf3aQ3ULJ3 Gm5224-201ENSMUST00000183060 350 ntBASIC2.32□□□□□ -2.04
Upf3aQ3ULJ3 Gm29641-201ENSMUST00000188955 259 ntBASIC2.32□□□□□ -2.04
Upf3aQ3ULJ3 Gm28384-201ENSMUST00000189079 463 ntBASIC2.32□□□□□ -2.04
Upf3aQ3ULJ3 Gm43722-201ENSMUST00000196054 124 ntBASIC2.32□□□□□ -2.04
Upf3aQ3ULJ3 Gm43114-201ENSMUST00000198298 343 ntBASIC2.32□□□□□ -2.04
Upf3aQ3ULJ3 Gm26379-202ENSMUST00000200225 132 ntBASIC2.32□□□□□ -2.04
Upf3aQ3ULJ3 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC2.32□□□□□ -2.04
Upf3aQ3ULJ3 Gm45173-201ENSMUST00000206819 305 ntBASIC2.32□□□□□ -2.04
Upf3aQ3ULJ3 AL669916.3-201ENSMUST00000213855 94 ntBASIC2.32□□□□□ -2.04
Upf3aQ3ULJ3 AL669916.6-201ENSMUST00000214610 94 ntBASIC2.32□□□□□ -2.04
Upf3aQ3ULJ3 AL669916.4-201ENSMUST00000215976 94 ntBASIC2.32□□□□□ -2.04
Upf3aQ3ULJ3 AL669916.1-201ENSMUST00000217640 94 ntBASIC2.32□□□□□ -2.04
Upf3aQ3ULJ3 AC101677.1-201ENSMUST00000218590 158 ntBASIC2.32□□□□□ -2.04
Upf3aQ3ULJ3 Gm46994-201ENSMUST00000221523 219 ntBASIC2.32□□□□□ -2.04
Upf3aQ3ULJ3 Gm5955-201ENSMUST00000222712 219 ntBASIC2.32□□□□□ -2.04
Upf3aQ3ULJ3 AC183092.2-201ENSMUST00000225542 1153 ntBASIC2.32□□□□□ -2.04
Upf3aQ3ULJ3 AC126440.1-201ENSMUST00000227098 349 ntBASIC2.32□□□□□ -2.04
Upf3aQ3ULJ3 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Upf3aQ3ULJ3 Mir19a-201ENSMUST00000083482 82 ntBASIC2.32□□□□□ -2.04
Upf3aQ3ULJ3 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
Upf3aQ3ULJ3 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Upf3aQ3ULJ3 Gm25088-201ENSMUST00000101803 79 ntBASIC2.31□□□□□ -2.04
Upf3aQ3ULJ3 Gm11813-201ENSMUST00000118586 291 ntBASIC2.31□□□□□ -2.04
Upf3aQ3ULJ3 Gm14899-201ENSMUST00000118673 548 ntBASIC2.31□□□□□ -2.04
Upf3aQ3ULJ3 Gm14835-201ENSMUST00000119039 315 ntBASIC2.31□□□□□ -2.04
Upf3aQ3ULJ3 Gm14945-201ENSMUST00000119556 1118 ntBASIC2.31□□□□□ -2.04
Upf3aQ3ULJ3 Gm6444-201ENSMUST00000119611 458 ntBASIC2.31□□□□□ -2.04
Upf3aQ3ULJ3 Gm11407-201ENSMUST00000120362 1058 ntBASIC2.31□□□□□ -2.04
Upf3aQ3ULJ3 Gm11389-201ENSMUST00000121407 430 ntBASIC2.31□□□□□ -2.04
Upf3aQ3ULJ3 Gm14694-201ENSMUST00000121856 282 ntBASIC2.31□□□□□ -2.04
Upf3aQ3ULJ3 Gm23867-201ENSMUST00000122649 274 ntBASIC2.31□□□□□ -2.04
Upf3aQ3ULJ3 Gm2830-201ENSMUST00000140330 385 ntBASIC2.31□□□□□ -2.04
Upf3aQ3ULJ3 Gm23704-201ENSMUST00000158844 340 ntBASIC2.31□□□□□ -2.04
Upf3aQ3ULJ3 Gm25365-201ENSMUST00000158852 121 ntBASIC2.31□□□□□ -2.04
Upf3aQ3ULJ3 Gm26195-201ENSMUST00000175035 101 ntBASIC2.31□□□□□ -2.04
Upf3aQ3ULJ3 Gm18396-201ENSMUST00000177095 361 ntBASIC2.31□□□□□ -2.04
Upf3aQ3ULJ3 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Upf3aQ3ULJ3 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
Upf3aQ3ULJ3 Gm27991-201ENSMUST00000184804 137 ntBASIC2.31□□□□□ -2.04
Upf3aQ3ULJ3 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC2.31□□□□□ -2.04
Upf3aQ3ULJ3 Gm44282-201ENSMUST00000203199 190 ntBASIC2.31□□□□□ -2.04
Upf3aQ3ULJ3 Gm45445-201ENSMUST00000209586 232 ntBASIC2.31□□□□□ -2.04
Upf3aQ3ULJ3 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC2.31□□□□□ -2.04
Upf3aQ3ULJ3 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC2.31□□□□□ -2.04
Upf3aQ3ULJ3 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Upf3aQ3ULJ3 AC138667.2-201ENSMUST00000224880 598 ntBASIC2.31□□□□□ -2.04
Upf3aQ3ULJ3 AC133076.1-201ENSMUST00000228074 484 ntBASIC2.31□□□□□ -2.04
Upf3aQ3ULJ3 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC2.31□□□□□ -2.04
Upf3aQ3ULJ3 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.3□□□□□ -2.04
Upf3aQ3ULJ3 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.3□□□□□ -2.04
Upf3aQ3ULJ3 Gm25377-201ENSMUST00000104334 129 ntBASIC2.3□□□□□ -2.04
Upf3aQ3ULJ3 Gm14652-201ENSMUST00000118479 235 ntBASIC2.3□□□□□ -2.04
Upf3aQ3ULJ3 Gm11784-201ENSMUST00000118568 474 ntBASIC2.3□□□□□ -2.04
Upf3aQ3ULJ3 Gm14292-201ENSMUST00000118761 456 ntBASIC2.3□□□□□ -2.04
Upf3aQ3ULJ3 Gm13482-201ENSMUST00000119842 254 ntBASIC2.3□□□□□ -2.04
Upf3aQ3ULJ3 Gm12045-201ENSMUST00000122122 573 ntBASIC2.3□□□□□ -2.04
Upf3aQ3ULJ3 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC2.3□□□□□ -2.04
Upf3aQ3ULJ3 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC2.3□□□□□ -2.04
Upf3aQ3ULJ3 Gm24910-201ENSMUST00000157289 272 ntBASIC2.3□□□□□ -2.04
Upf3aQ3ULJ3 Gm25910-201ENSMUST00000157620 140 ntBASIC2.3□□□□□ -2.04
Upf3aQ3ULJ3 Gm17162-201ENSMUST00000168538 473 ntBASIC2.3□□□□□ -2.04
Upf3aQ3ULJ3 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC2.3□□□□□ -2.04
Upf3aQ3ULJ3 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC2.3□□□□□ -2.04
Upf3aQ3ULJ3 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC2.3□□□□□ -2.04
Upf3aQ3ULJ3 Gm22584-201ENSMUST00000177935 92 ntBASIC2.3□□□□□ -2.04
Upf3aQ3ULJ3 Gm22131-201ENSMUST00000178415 94 ntBASIC2.3□□□□□ -2.04
Upf3aQ3ULJ3 Gm24100-201ENSMUST00000178592 79 ntBASIC2.3□□□□□ -2.04
Upf3aQ3ULJ3 Gm23269-201ENSMUST00000178701 107 ntBASIC2.3□□□□□ -2.04
Upf3aQ3ULJ3 Mir7017-201ENSMUST00000184894 62 ntBASIC2.3□□□□□ -2.04
Upf3aQ3ULJ3 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC2.3□□□□□ -2.04
Upf3aQ3ULJ3 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Upf3aQ3ULJ3 Gm29184-201ENSMUST00000190038 334 ntBASIC2.3□□□□□ -2.04
Upf3aQ3ULJ3 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.3□□□□□ -2.04
Upf3aQ3ULJ3 Gm31230-201ENSMUST00000199725 785 ntBASIC2.3□□□□□ -2.04
Upf3aQ3ULJ3 AC162931.1-201ENSMUST00000214184 267 ntBASIC2.3□□□□□ -2.04
Upf3aQ3ULJ3 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Upf3aQ3ULJ3 AC154603.1-201ENSMUST00000224355 313 ntBASIC2.3□□□□□ -2.04
Upf3aQ3ULJ3 AC160962.2-201ENSMUST00000224761 632 ntBASIC2.3□□□□□ -2.04
Upf3aQ3ULJ3 AC170810.3-201ENSMUST00000226177 374 ntBASIC2.3□□□□□ -2.04
Upf3aQ3ULJ3 AC166344.2-201ENSMUST00000226747 374 ntBASIC2.3□□□□□ -2.04
Upf3aQ3ULJ3 Snord104-201ENSMUST00000083192 70 ntBASIC2.3□□□□□ -2.04
Upf3aQ3ULJ3 Gm25755-201ENSMUST00000083396 107 ntBASIC2.3□□□□□ -2.04
Upf3aQ3ULJ3 Gm43924-201ENSMUST00000204851 1736 ntBASIC2.3□□□□□ -2.04
Upf3aQ3ULJ3 Gm42659-201ENSMUST00000196955 1754 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 94.4 ms