Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC2.5□□□□□ -2.01
Trafd1Q3UDK1 Gm8392-201ENSMUST00000185647 835 ntBASIC2.5□□□□□ -2.01
Trafd1Q3UDK1 Gm44961-201ENSMUST00000207450 196 ntBASIC2.5□□□□□ -2.01
Trafd1Q3UDK1 AC123860.1-201ENSMUST00000228033 481 ntBASIC2.5□□□□□ -2.01
Trafd1Q3UDK1 Gm4945-201ENSMUST00000075152 453 ntBASIC2.5□□□□□ -2.01
Trafd1Q3UDK1 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
Trafd1Q3UDK1 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.5□□□□□ -2.01
Trafd1Q3UDK1 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.5□□□□□ -2.01
Trafd1Q3UDK1 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
Trafd1Q3UDK1 AC121598.3-201ENSMUST00000227179 1643 ntBASIC2.5□□□□□ -2.01
Trafd1Q3UDK1 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trafd1Q3UDK1 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Trafd1Q3UDK1 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Trafd1Q3UDK1 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Trafd1Q3UDK1 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Trafd1Q3UDK1 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
Trafd1Q3UDK1 Gm15175-201ENSMUST00000117629 132 ntBASIC2.49□□□□□ -2.01
Trafd1Q3UDK1 Gm14362-201ENSMUST00000121679 273 ntBASIC2.49□□□□□ -2.01
Trafd1Q3UDK1 Gm14821-201ENSMUST00000121975 435 ntBASIC2.49□□□□□ -2.01
Trafd1Q3UDK1 Gm7209-201ENSMUST00000122339 333 ntBASIC2.49□□□□□ -2.01
Trafd1Q3UDK1 Gm12238-201ENSMUST00000127764 124 ntBASIC2.49□□□□□ -2.01
Trafd1Q3UDK1 Gm15254-201ENSMUST00000149567 273 ntBASIC2.49□□□□□ -2.01
Trafd1Q3UDK1 Gm22225-201ENSMUST00000157358 278 ntBASIC2.49□□□□□ -2.01
Trafd1Q3UDK1 Gm3104-201ENSMUST00000171004 473 ntBASIC2.49□□□□□ -2.01
Trafd1Q3UDK1 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC2.49□□□□□ -2.01
Trafd1Q3UDK1 Gm22633-201ENSMUST00000179834 107 ntBASIC2.49□□□□□ -2.01
Trafd1Q3UDK1 Gm27236-201ENSMUST00000184147 442 ntBASIC2.49□□□□□ -2.01
Trafd1Q3UDK1 Mir8106-201ENSMUST00000184520 139 ntBASIC2.49□□□□□ -2.01
Trafd1Q3UDK1 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC2.49□□□□□ -2.01
Trafd1Q3UDK1 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC2.49□□□□□ -2.01
Trafd1Q3UDK1 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Trafd1Q3UDK1 Gm45387-201ENSMUST00000209792 632 ntBASIC2.49□□□□□ -2.01
Trafd1Q3UDK1 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Trafd1Q3UDK1 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC2.49□□□□□ -2.01
Trafd1Q3UDK1 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Trafd1Q3UDK1 CT025689.4-201ENSMUST00000225926 601 ntBASIC2.49□□□□□ -2.01
Trafd1Q3UDK1 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Trafd1Q3UDK1 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trafd1Q3UDK1 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Trafd1Q3UDK1 Gm14797-201ENSMUST00000119378 1480 ntBASIC2.48□□□□□ -2.01
Trafd1Q3UDK1 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC2.48□□□□□ -2.01
Trafd1Q3UDK1 Gm12433-201ENSMUST00000119659 255 ntBASIC2.48□□□□□ -2.01
Trafd1Q3UDK1 Gm15030-201ENSMUST00000119804 484 ntBASIC2.48□□□□□ -2.01
Trafd1Q3UDK1 Gm7916-201ENSMUST00000120325 456 ntBASIC2.48□□□□□ -2.01
Trafd1Q3UDK1 Gm11384-201ENSMUST00000121376 303 ntBASIC2.48□□□□□ -2.01
Trafd1Q3UDK1 Gm23429-201ENSMUST00000122486 149 ntBASIC2.48□□□□□ -2.01
Trafd1Q3UDK1 Gm24784-201ENSMUST00000157640 62 ntBASIC2.48□□□□□ -2.01
Trafd1Q3UDK1 Gm24212-201ENSMUST00000158258 132 ntBASIC2.48□□□□□ -2.01
Trafd1Q3UDK1 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
Trafd1Q3UDK1 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC2.48□□□□□ -2.01
Trafd1Q3UDK1 Mir6383-201ENSMUST00000184545 116 ntBASIC2.48□□□□□ -2.01
Trafd1Q3UDK1 Gm27539-201ENSMUST00000184971 224 ntBASIC2.48□□□□□ -2.01
Trafd1Q3UDK1 Gm29413-201ENSMUST00000186019 880 ntBASIC2.48□□□□□ -2.01
Trafd1Q3UDK1 Gm17946-201ENSMUST00000186856 538 ntBASIC2.48□□□□□ -2.01
Trafd1Q3UDK1 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Trafd1Q3UDK1 Gm29216-201ENSMUST00000187117 492 ntBASIC2.48□□□□□ -2.01
Trafd1Q3UDK1 Gm29639-201ENSMUST00000188375 580 ntBASIC2.48□□□□□ -2.01
Trafd1Q3UDK1 Gm28151-201ENSMUST00000189404 951 ntBASIC2.48□□□□□ -2.01
Trafd1Q3UDK1 Gm29553-201ENSMUST00000189692 279 ntBASIC2.48□□□□□ -2.01
Trafd1Q3UDK1 Gm37771-201ENSMUST00000193121 265 ntBASIC2.48□□□□□ -2.01
Trafd1Q3UDK1 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC2.48□□□□□ -2.01
Trafd1Q3UDK1 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC2.48□□□□□ -2.01
Trafd1Q3UDK1 AC116589.1-201ENSMUST00000220634 327 ntBASIC2.48□□□□□ -2.01
Trafd1Q3UDK1 AC173482.2-201ENSMUST00000224044 750 ntBASIC2.48□□□□□ -2.01
Trafd1Q3UDK1 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Trafd1Q3UDK1 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Trafd1Q3UDK1 Gm22061-201ENSMUST00000082557 107 ntBASIC2.48□□□□□ -2.01
Trafd1Q3UDK1 Gm23097-201ENSMUST00000083448 105 ntBASIC2.48□□□□□ -2.01
Trafd1Q3UDK1 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Trafd1Q3UDK1 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
Trafd1Q3UDK1 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Trafd1Q3UDK1 Gm24274-201ENSMUST00000116787 124 ntBASIC2.47□□□□□ -2.01
Trafd1Q3UDK1 Gm22486-201ENSMUST00000116815 137 ntBASIC2.47□□□□□ -2.01
Trafd1Q3UDK1 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Trafd1Q3UDK1 Gm25391-201ENSMUST00000157342 134 ntBASIC2.47□□□□□ -2.01
Trafd1Q3UDK1 Gm22098-201ENSMUST00000157930 85 ntBASIC2.47□□□□□ -2.01
Trafd1Q3UDK1 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC2.47□□□□□ -2.01
Trafd1Q3UDK1 Gm26195-201ENSMUST00000175035 101 ntBASIC2.47□□□□□ -2.01
Trafd1Q3UDK1 Gm22631-201ENSMUST00000179656 94 ntBASIC2.47□□□□□ -2.01
Trafd1Q3UDK1 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC2.47□□□□□ -2.01
Trafd1Q3UDK1 Snord116l14-201ENSMUST00000179875 94 ntBASIC2.47□□□□□ -2.01
Trafd1Q3UDK1 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
Trafd1Q3UDK1 Gm44324-201ENSMUST00000198517 135 ntBASIC2.47□□□□□ -2.01
Trafd1Q3UDK1 Gm43626-201ENSMUST00000198575 162 ntBASIC2.47□□□□□ -2.01
Trafd1Q3UDK1 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
Trafd1Q3UDK1 Gm44520-201ENSMUST00000205447 802 ntBASIC2.47□□□□□ -2.01
Trafd1Q3UDK1 Gm44657-201ENSMUST00000208568 450 ntBASIC2.47□□□□□ -2.01
Trafd1Q3UDK1 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC2.47□□□□□ -2.01
Trafd1Q3UDK1 Gm8031-201ENSMUST00000213430 626 ntBASIC2.47□□□□□ -2.01
Trafd1Q3UDK1 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC2.47□□□□□ -2.01
Trafd1Q3UDK1 AC156790.3-201ENSMUST00000226200 254 ntBASIC2.47□□□□□ -2.01
Trafd1Q3UDK1 AC158395.1-201ENSMUST00000227206 452 ntBASIC2.47□□□□□ -2.01
Trafd1Q3UDK1 AC120553.1-201ENSMUST00000227313 260 ntBASIC2.47□□□□□ -2.01
Trafd1Q3UDK1 CT030662.1-201ENSMUST00000227380 232 ntBASIC2.47□□□□□ -2.01
Trafd1Q3UDK1 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Trafd1Q3UDK1 Gm22507-201ENSMUST00000082773 160 ntBASIC2.47□□□□□ -2.01
Trafd1Q3UDK1 Gm23650-201ENSMUST00000083355 70 ntBASIC2.47□□□□□ -2.01
Trafd1Q3UDK1 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
Trafd1Q3UDK1 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Trafd1Q3UDK1 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.47□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 96.8 ms