Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Usp39Q3TIX9 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.6□□□□□ -1.83
Usp39Q3TIX9 Gm22433-201ENSMUST00000158550 142 ntBASIC3.6□□□□□ -1.83
Usp39Q3TIX9 Gm17072-201ENSMUST00000166673 658 ntBASIC3.6□□□□□ -1.83
Usp39Q3TIX9 Gm20693-201ENSMUST00000177431 211 ntBASIC3.6□□□□□ -1.83
Usp39Q3TIX9 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.6□□□□□ -1.83
Usp39Q3TIX9 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC3.6□□□□□ -1.83
Usp39Q3TIX9 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC3.6□□□□□ -1.83
Usp39Q3TIX9 Gm37239-201ENSMUST00000193510 141 ntBASIC3.6□□□□□ -1.83
Usp39Q3TIX9 Gm38060-201ENSMUST00000194822 464 ntBASIC3.6□□□□□ -1.83
Usp39Q3TIX9 Gm34073-201ENSMUST00000195736 212 ntBASIC3.6□□□□□ -1.83
Usp39Q3TIX9 Gm45403-201ENSMUST00000209453 276 ntBASIC3.6□□□□□ -1.83
Usp39Q3TIX9 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC3.6□□□□□ -1.83
Usp39Q3TIX9 Gm45327-201ENSMUST00000211612 565 ntBASIC3.6□□□□□ -1.83
Usp39Q3TIX9 AC115291.2-201ENSMUST00000228335 437 ntBASIC3.6□□□□□ -1.83
Usp39Q3TIX9 Gm22358-201ENSMUST00000082877 122 ntBASIC3.6□□□□□ -1.83
Usp39Q3TIX9 Gm26055-201ENSMUST00000083038 107 ntBASIC3.6□□□□□ -1.83
Usp39Q3TIX9 Gm25188-201ENSMUST00000083913 122 ntBASIC3.6□□□□□ -1.83
Usp39Q3TIX9 Gm38073-201ENSMUST00000195141 3665 ntBASIC3.6□□□□□ -1.83
Usp39Q3TIX9 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Usp39Q3TIX9 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Usp39Q3TIX9 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.6□□□□□ -1.83
Usp39Q3TIX9 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
Usp39Q3TIX9 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
Usp39Q3TIX9 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Usp39Q3TIX9 Gm23256-201ENSMUST00000102235 110 ntBASIC3.59□□□□□ -1.83
Usp39Q3TIX9 Gm26140-201ENSMUST00000103807 110 ntBASIC3.59□□□□□ -1.83
Usp39Q3TIX9 Gm14838-201ENSMUST00000118913 248 ntBASIC3.59□□□□□ -1.83
Usp39Q3TIX9 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.59□□□□□ -1.83
Usp39Q3TIX9 Gm13967-201ENSMUST00000120404 380 ntBASIC3.59□□□□□ -1.83
Usp39Q3TIX9 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC3.59□□□□□ -1.83
Usp39Q3TIX9 n-R5s192-201ENSMUST00000122577 119 ntBASIC3.59□□□□□ -1.83
Usp39Q3TIX9 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC3.59□□□□□ -1.83
Usp39Q3TIX9 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC3.59□□□□□ -1.83
Usp39Q3TIX9 Gm22814-201ENSMUST00000157452 104 ntBASIC3.59□□□□□ -1.83
Usp39Q3TIX9 Gm23123-201ENSMUST00000157648 144 ntBASIC3.59□□□□□ -1.83
Usp39Q3TIX9 Gm24727-201ENSMUST00000158231 144 ntBASIC3.59□□□□□ -1.83
Usp39Q3TIX9 Gm23759-201ENSMUST00000158351 268 ntBASIC3.59□□□□□ -1.83
Usp39Q3TIX9 Gm17119-201ENSMUST00000163943 280 ntBASIC3.59□□□□□ -1.83
Usp39Q3TIX9 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Usp39Q3TIX9 Gm22908-201ENSMUST00000177620 110 ntBASIC3.59□□□□□ -1.83
Usp39Q3TIX9 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC3.59□□□□□ -1.83
Usp39Q3TIX9 Mir6408-201ENSMUST00000183643 91 ntBASIC3.59□□□□□ -1.83
Usp39Q3TIX9 Gm27535-201ENSMUST00000183814 157 ntBASIC3.59□□□□□ -1.83
Usp39Q3TIX9 Gm5829-201ENSMUST00000191383 351 ntBASIC3.59□□□□□ -1.83
Usp39Q3TIX9 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.59□□□□□ -1.83
Usp39Q3TIX9 Gm6240-201ENSMUST00000208014 473 ntBASIC3.59□□□□□ -1.83
Usp39Q3TIX9 Gm45772-201ENSMUST00000212961 240 ntBASIC3.59□□□□□ -1.83
Usp39Q3TIX9 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC3.59□□□□□ -1.83
Usp39Q3TIX9 AL590503.1-201ENSMUST00000222053 321 ntBASIC3.59□□□□□ -1.83
Usp39Q3TIX9 Gm26497-201ENSMUST00000083146 107 ntBASIC3.59□□□□□ -1.83
Usp39Q3TIX9 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.59□□□□□ -1.83
Usp39Q3TIX9 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Usp39Q3TIX9 Gm43663-201ENSMUST00000198643 1505 ntBASIC3.59□□□□□ -1.84
Usp39Q3TIX9 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Usp39Q3TIX9 AC122840.2-201ENSMUST00000221030 2659 ntBASIC3.58□□□□□ -1.84
Usp39Q3TIX9 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Usp39Q3TIX9 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Usp39Q3TIX9 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Usp39Q3TIX9 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Usp39Q3TIX9 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Usp39Q3TIX9 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.58□□□□□ -1.84
Usp39Q3TIX9 Mir881-201ENSMUST00000104844 78 ntBASIC3.58□□□□□ -1.84
Usp39Q3TIX9 Gm15268-201ENSMUST00000118845 352 ntBASIC3.58□□□□□ -1.84
Usp39Q3TIX9 Gm13903-201ENSMUST00000120945 193 ntBASIC3.58□□□□□ -1.84
Usp39Q3TIX9 Gm5958-201ENSMUST00000147698 297 ntBASIC3.58□□□□□ -1.84
Usp39Q3TIX9 Gm26148-201ENSMUST00000157430 68 ntBASIC3.58□□□□□ -1.84
Usp39Q3TIX9 Gm25425-201ENSMUST00000157611 96 ntBASIC3.58□□□□□ -1.84
Usp39Q3TIX9 Gm25436-201ENSMUST00000158275 145 ntBASIC3.58□□□□□ -1.84
Usp39Q3TIX9 Gm22889-201ENSMUST00000158639 58 ntBASIC3.58□□□□□ -1.84
Usp39Q3TIX9 Gm26005-201ENSMUST00000158802 134 ntBASIC3.58□□□□□ -1.84
Usp39Q3TIX9 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Usp39Q3TIX9 Gm26460-201ENSMUST00000175061 126 ntBASIC3.58□□□□□ -1.84
Usp39Q3TIX9 Gm24085-201ENSMUST00000175172 116 ntBASIC3.58□□□□□ -1.84
Usp39Q3TIX9 Gm24811-201ENSMUST00000175313 100 ntBASIC3.58□□□□□ -1.84
Usp39Q3TIX9 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.58□□□□□ -1.84
Usp39Q3TIX9 Gm27928-201ENSMUST00000183747 256 ntBASIC3.58□□□□□ -1.84
Usp39Q3TIX9 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Usp39Q3TIX9 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC3.58□□□□□ -1.84
Usp39Q3TIX9 Gm28921-201ENSMUST00000190219 378 ntBASIC3.58□□□□□ -1.84
Usp39Q3TIX9 Gm28288-201ENSMUST00000191019 214 ntBASIC3.58□□□□□ -1.84
Usp39Q3TIX9 Gm18453-201ENSMUST00000208000 626 ntBASIC3.58□□□□□ -1.84
Usp39Q3TIX9 Gm34779-201ENSMUST00000210036 263 ntBASIC3.58□□□□□ -1.84
Usp39Q3TIX9 Gm20039-201ENSMUST00000210329 394 ntBASIC3.58□□□□□ -1.84
Usp39Q3TIX9 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Usp39Q3TIX9 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.58□□□□□ -1.84
Usp39Q3TIX9 Gm3829-201ENSMUST00000222362 619 ntBASIC3.58□□□□□ -1.84
Usp39Q3TIX9 AC130829.3-201ENSMUST00000222735 154 ntBASIC3.58□□□□□ -1.84
Usp39Q3TIX9 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Usp39Q3TIX9 Gm10092-201ENSMUST00000077110 180 ntBASIC3.58□□□□□ -1.84
Usp39Q3TIX9 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.58□□□□□ -1.84
Usp39Q3TIX9 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Usp39Q3TIX9 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Usp39Q3TIX9 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Usp39Q3TIX9 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.57□□□□□ -1.84
Usp39Q3TIX9 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.57□□□□□ -1.84
Usp39Q3TIX9 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Usp39Q3TIX9 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.57□□□□□ -1.84
Usp39Q3TIX9 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.57□□□□□ -1.84
Usp39Q3TIX9 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms