Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Gm13329-201ENSMUST00000117063 265 ntBASIC3.6□□□□□ -1.83
Ccbe1Q3MI99 Gm12954-201ENSMUST00000118610 611 ntBASIC3.6□□□□□ -1.83
Ccbe1Q3MI99 Gm12647-201ENSMUST00000118977 265 ntBASIC3.6□□□□□ -1.83
Ccbe1Q3MI99 Gm12852-201ENSMUST00000119478 719 ntBASIC3.6□□□□□ -1.83
Ccbe1Q3MI99 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.6□□□□□ -1.83
Ccbe1Q3MI99 Gm15807-201ENSMUST00000119880 1128 ntBASIC3.6□□□□□ -1.83
Ccbe1Q3MI99 Gm13239-201ENSMUST00000119920 637 ntBASIC3.6□□□□□ -1.83
Ccbe1Q3MI99 Gm13153-201ENSMUST00000120969 637 ntBASIC3.6□□□□□ -1.83
Ccbe1Q3MI99 Gm11849-201ENSMUST00000121293 261 ntBASIC3.6□□□□□ -1.83
Ccbe1Q3MI99 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC3.6□□□□□ -1.83
Ccbe1Q3MI99 Gm25058-201ENSMUST00000157365 128 ntBASIC3.6□□□□□ -1.83
Ccbe1Q3MI99 Gm27723-201ENSMUST00000157398 63 ntBASIC3.6□□□□□ -1.83
Ccbe1Q3MI99 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Ccbe1Q3MI99 Gm22308-201ENSMUST00000177609 107 ntBASIC3.6□□□□□ -1.83
Ccbe1Q3MI99 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Ccbe1Q3MI99 Mir6391-201ENSMUST00000184391 104 ntBASIC3.6□□□□□ -1.83
Ccbe1Q3MI99 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC3.6□□□□□ -1.83
Ccbe1Q3MI99 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC3.6□□□□□ -1.83
Ccbe1Q3MI99 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.6□□□□□ -1.83
Ccbe1Q3MI99 Gm17887-201ENSMUST00000200194 547 ntBASIC3.6□□□□□ -1.83
Ccbe1Q3MI99 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC3.6□□□□□ -1.83
Ccbe1Q3MI99 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC3.6□□□□□ -1.83
Ccbe1Q3MI99 Gm45651-201ENSMUST00000210857 335 ntBASIC3.6□□□□□ -1.83
Ccbe1Q3MI99 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC3.6□□□□□ -1.83
Ccbe1Q3MI99 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Ccbe1Q3MI99 AC158622.1-201ENSMUST00000217107 230 ntBASIC3.6□□□□□ -1.83
Ccbe1Q3MI99 Gm46190-201ENSMUST00000219650 427 ntBASIC3.6□□□□□ -1.83
Ccbe1Q3MI99 AC113031.4-201ENSMUST00000228381 514 ntBASIC3.6□□□□□ -1.83
Ccbe1Q3MI99 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ccbe1Q3MI99 n-R5s50-201ENSMUST00000083168 111 ntBASIC3.6□□□□□ -1.83
Ccbe1Q3MI99 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ccbe1Q3MI99 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ccbe1Q3MI99 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Ccbe1Q3MI99 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Ccbe1Q3MI99 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Ccbe1Q3MI99 Gm24120-201ENSMUST00000103978 129 ntBASIC3.59□□□□□ -1.83
Ccbe1Q3MI99 Gm15282-201ENSMUST00000117707 300 ntBASIC3.59□□□□□ -1.83
Ccbe1Q3MI99 Gm13396-201ENSMUST00000120617 271 ntBASIC3.59□□□□□ -1.83
Ccbe1Q3MI99 Gm14101-201ENSMUST00000121502 473 ntBASIC3.59□□□□□ -1.83
Ccbe1Q3MI99 Gm5963-201ENSMUST00000143451 236 ntBASIC3.59□□□□□ -1.83
Ccbe1Q3MI99 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.59□□□□□ -1.83
Ccbe1Q3MI99 Gm24251-201ENSMUST00000157324 114 ntBASIC3.59□□□□□ -1.83
Ccbe1Q3MI99 Gm22537-201ENSMUST00000158172 199 ntBASIC3.59□□□□□ -1.83
Ccbe1Q3MI99 Gm25654-201ENSMUST00000158467 88 ntBASIC3.59□□□□□ -1.83
Ccbe1Q3MI99 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC3.59□□□□□ -1.83
Ccbe1Q3MI99 Gm22367-201ENSMUST00000178930 132 ntBASIC3.59□□□□□ -1.83
Ccbe1Q3MI99 Mir7022-201ENSMUST00000183749 61 ntBASIC3.59□□□□□ -1.83
Ccbe1Q3MI99 Gm8599-201ENSMUST00000193033 457 ntBASIC3.59□□□□□ -1.83
Ccbe1Q3MI99 Gm44650-201ENSMUST00000206929 194 ntBASIC3.59□□□□□ -1.83
Ccbe1Q3MI99 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC3.59□□□□□ -1.83
Ccbe1Q3MI99 Gm18462-201ENSMUST00000208112 417 ntBASIC3.59□□□□□ -1.83
Ccbe1Q3MI99 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Ccbe1Q3MI99 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC3.59□□□□□ -1.83
Ccbe1Q3MI99 AC163357.1-201ENSMUST00000220847 233 ntBASIC3.59□□□□□ -1.83
Ccbe1Q3MI99 CT954323.1-201ENSMUST00000222774 229 ntBASIC3.59□□□□□ -1.83
Ccbe1Q3MI99 AC101945.1-201ENSMUST00000226734 466 ntBASIC3.59□□□□□ -1.83
Ccbe1Q3MI99 Gm5670-201ENSMUST00000093546 372 ntBASIC3.59□□□□□ -1.83
Ccbe1Q3MI99 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.59□□□□□ -1.84
Ccbe1Q3MI99 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Ccbe1Q3MI99 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Ccbe1Q3MI99 Gm23142-201ENSMUST00000101848 105 ntBASIC3.58□□□□□ -1.84
Ccbe1Q3MI99 Gm26240-201ENSMUST00000101893 105 ntBASIC3.58□□□□□ -1.84
Ccbe1Q3MI99 Gm25538-201ENSMUST00000101943 107 ntBASIC3.58□□□□□ -1.84
Ccbe1Q3MI99 Gm22473-201ENSMUST00000104114 132 ntBASIC3.58□□□□□ -1.84
Ccbe1Q3MI99 Gm12112-201ENSMUST00000117772 231 ntBASIC3.58□□□□□ -1.84
Ccbe1Q3MI99 Gm2066-201ENSMUST00000118046 389 ntBASIC3.58□□□□□ -1.84
Ccbe1Q3MI99 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC3.58□□□□□ -1.84
Ccbe1Q3MI99 Gm12213-201ENSMUST00000119924 353 ntBASIC3.58□□□□□ -1.84
Ccbe1Q3MI99 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC3.58□□□□□ -1.84
Ccbe1Q3MI99 Gm23789-201ENSMUST00000122536 301 ntBASIC3.58□□□□□ -1.84
Ccbe1Q3MI99 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.58□□□□□ -1.84
Ccbe1Q3MI99 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC3.58□□□□□ -1.84
Ccbe1Q3MI99 Gm15796-201ENSMUST00000162135 204 ntBASIC3.58□□□□□ -1.84
Ccbe1Q3MI99 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Ccbe1Q3MI99 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Ccbe1Q3MI99 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC3.58□□□□□ -1.84
Ccbe1Q3MI99 Gm23638-201ENSMUST00000175073 126 ntBASIC3.58□□□□□ -1.84
Ccbe1Q3MI99 Gm23158-201ENSMUST00000175076 126 ntBASIC3.58□□□□□ -1.84
Ccbe1Q3MI99 Gm22907-201ENSMUST00000175198 126 ntBASIC3.58□□□□□ -1.84
Ccbe1Q3MI99 Gm25071-201ENSMUST00000175232 70 ntBASIC3.58□□□□□ -1.84
Ccbe1Q3MI99 Gm22625-201ENSMUST00000175382 126 ntBASIC3.58□□□□□ -1.84
Ccbe1Q3MI99 Gm22875-201ENSMUST00000175449 126 ntBASIC3.58□□□□□ -1.84
Ccbe1Q3MI99 Gm25197-201ENSMUST00000175516 126 ntBASIC3.58□□□□□ -1.84
Ccbe1Q3MI99 Gm27857-201ENSMUST00000176930 126 ntBASIC3.58□□□□□ -1.84
Ccbe1Q3MI99 Gm26268-201ENSMUST00000177685 126 ntBASIC3.58□□□□□ -1.84
Ccbe1Q3MI99 Gm23681-201ENSMUST00000178821 126 ntBASIC3.58□□□□□ -1.84
Ccbe1Q3MI99 Gm27940-201ENSMUST00000184449 98 ntBASIC3.58□□□□□ -1.84
Ccbe1Q3MI99 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC3.58□□□□□ -1.84
Ccbe1Q3MI99 Gm17951-201ENSMUST00000198536 496 ntBASIC3.58□□□□□ -1.84
Ccbe1Q3MI99 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC3.58□□□□□ -1.84
Ccbe1Q3MI99 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC3.58□□□□□ -1.84
Ccbe1Q3MI99 Mir691-201ENSMUST00000199719 78 ntBASIC3.58□□□□□ -1.84
Ccbe1Q3MI99 Gm43407-201ENSMUST00000199816 317 ntBASIC3.58□□□□□ -1.84
Ccbe1Q3MI99 Gm20144-201ENSMUST00000203031 165 ntBASIC3.58□□□□□ -1.84
Ccbe1Q3MI99 Gm46998-201ENSMUST00000221444 330 ntBASIC3.58□□□□□ -1.84
Ccbe1Q3MI99 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC3.58□□□□□ -1.84
Ccbe1Q3MI99 n-R5s151-201ENSMUST00000083959 119 ntBASIC3.58□□□□□ -1.84
Ccbe1Q3MI99 Mir471-201ENSMUST00000093596 67 ntBASIC3.58□□□□□ -1.84
Ccbe1Q3MI99 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Ccbe1Q3MI99 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms