Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Gm37869-201ENSMUST00000193385 595 ntBASIC2.58□□□□□ -2
Ptchd3Q0EEE2 Gm24350-202ENSMUST00000198309 132 ntBASIC2.58□□□□□ -2
Ptchd3Q0EEE2 Igkv1-136-201ENSMUST00000200635 297 ntBASIC2.58□□□□□ -2
Ptchd3Q0EEE2 Gm44060-201ENSMUST00000204440 410 ntBASIC2.58□□□□□ -2
Ptchd3Q0EEE2 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC2.58□□□□□ -2
Ptchd3Q0EEE2 AL772265.1-201ENSMUST00000214379 305 ntBASIC2.58□□□□□ -2
Ptchd3Q0EEE2 AC171206.2-201ENSMUST00000215252 389 ntBASIC2.58□□□□□ -2
Ptchd3Q0EEE2 CT572985.2-201ENSMUST00000220496 211 ntBASIC2.58□□□□□ -2
Ptchd3Q0EEE2 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.58□□□□□ -2
Ptchd3Q0EEE2 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.58□□□□□ -2
Ptchd3Q0EEE2 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC2.58□□□□□ -2
Ptchd3Q0EEE2 Gm23615-201ENSMUST00000082602 65 ntBASIC2.58□□□□□ -2
Ptchd3Q0EEE2 Gm22572-201ENSMUST00000082985 105 ntBASIC2.58□□□□□ -2
Ptchd3Q0EEE2 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC2.58□□□□□ -2
Ptchd3Q0EEE2 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC2.58□□□□□ -2
Ptchd3Q0EEE2 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC2.58□□□□□ -2
Ptchd3Q0EEE2 AC124561.2-201ENSMUST00000226657 1973 ntBASIC2.58□□□□□ -2
Ptchd3Q0EEE2 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
Ptchd3Q0EEE2 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Ptchd3Q0EEE2 Gm23175-201ENSMUST00000104371 132 ntBASIC2.57□□□□□ -2
Ptchd3Q0EEE2 Gm22486-201ENSMUST00000116815 137 ntBASIC2.57□□□□□ -2
Ptchd3Q0EEE2 Gm11845-201ENSMUST00000117886 327 ntBASIC2.57□□□□□ -2
Ptchd3Q0EEE2 Gm12878-201ENSMUST00000118744 332 ntBASIC2.57□□□□□ -2
Ptchd3Q0EEE2 Gm5287-201ENSMUST00000120666 598 ntBASIC2.57□□□□□ -2
Ptchd3Q0EEE2 Gm15167-201ENSMUST00000121997 187 ntBASIC2.57□□□□□ -2
Ptchd3Q0EEE2 Gm12819-201ENSMUST00000122223 629 ntBASIC2.57□□□□□ -2
Ptchd3Q0EEE2 Gm15077-201ENSMUST00000122344 362 ntBASIC2.57□□□□□ -2
Ptchd3Q0EEE2 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC2.57□□□□□ -2
Ptchd3Q0EEE2 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC2.57□□□□□ -2
Ptchd3Q0EEE2 Gm23144-201ENSMUST00000180226 107 ntBASIC2.57□□□□□ -2
Ptchd3Q0EEE2 Gm26652-202ENSMUST00000181672 475 ntBASIC2.57□□□□□ -2
Ptchd3Q0EEE2 Gm27957-201ENSMUST00000184054 127 ntBASIC2.57□□□□□ -2
Ptchd3Q0EEE2 Gm27245-201ENSMUST00000184385 376 ntBASIC2.57□□□□□ -2
Ptchd3Q0EEE2 Gm19193-201ENSMUST00000190263 590 ntBASIC2.57□□□□□ -2
Ptchd3Q0EEE2 Gm29950-201ENSMUST00000195273 237 ntBASIC2.57□□□□□ -2
Ptchd3Q0EEE2 Gm43487-201ENSMUST00000200331 1031 ntBASIC2.57□□□□□ -2
Ptchd3Q0EEE2 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC2.57□□□□□ -2
Ptchd3Q0EEE2 AC126440.1-201ENSMUST00000227098 349 ntBASIC2.57□□□□□ -2
Ptchd3Q0EEE2 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.57□□□□□ -2
Ptchd3Q0EEE2 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.57□□□□□ -2
Ptchd3Q0EEE2 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC2.57□□□□□ -2
Ptchd3Q0EEE2 Gm24268-201ENSMUST00000082990 110 ntBASIC2.57□□□□□ -2
Ptchd3Q0EEE2 Snord104-201ENSMUST00000083192 70 ntBASIC2.57□□□□□ -2
Ptchd3Q0EEE2 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC2.57□□□□□ -2
Ptchd3Q0EEE2 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.57□□□□□ -2
Ptchd3Q0EEE2 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.57□□□□□ -2
Ptchd3Q0EEE2 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
Ptchd3Q0EEE2 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Ptchd3Q0EEE2 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Ptchd3Q0EEE2 Gm26147-201ENSMUST00000104479 114 ntBASIC2.56□□□□□ -2
Ptchd3Q0EEE2 Gm14073-201ENSMUST00000117344 381 ntBASIC2.56□□□□□ -2
Ptchd3Q0EEE2 Gm12770-201ENSMUST00000121734 462 ntBASIC2.56□□□□□ -2
Ptchd3Q0EEE2 Gm26027-201ENSMUST00000122725 268 ntBASIC2.56□□□□□ -2
Ptchd3Q0EEE2 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
Ptchd3Q0EEE2 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC2.56□□□□□ -2
Ptchd3Q0EEE2 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.56□□□□□ -2
Ptchd3Q0EEE2 Gm23599-201ENSMUST00000157261 251 ntBASIC2.56□□□□□ -2
Ptchd3Q0EEE2 Gm24901-201ENSMUST00000158125 110 ntBASIC2.56□□□□□ -2
Ptchd3Q0EEE2 Gm22611-201ENSMUST00000158288 150 ntBASIC2.56□□□□□ -2
Ptchd3Q0EEE2 Gm25490-201ENSMUST00000158734 130 ntBASIC2.56□□□□□ -2
Ptchd3Q0EEE2 Gm17187-201ENSMUST00000164622 410 ntBASIC2.56□□□□□ -2
Ptchd3Q0EEE2 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.56□□□□□ -2
Ptchd3Q0EEE2 Mir6363-201ENSMUST00000184880 114 ntBASIC2.56□□□□□ -2
Ptchd3Q0EEE2 Gm28169-201ENSMUST00000190342 345 ntBASIC2.56□□□□□ -2
Ptchd3Q0EEE2 Gm37029-201ENSMUST00000195773 239 ntBASIC2.56□□□□□ -2
Ptchd3Q0EEE2 Gm18341-201ENSMUST00000197538 622 ntBASIC2.56□□□□□ -2
Ptchd3Q0EEE2 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC2.56□□□□□ -2
Ptchd3Q0EEE2 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC2.56□□□□□ -2
Ptchd3Q0EEE2 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC2.56□□□□□ -2
Ptchd3Q0EEE2 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.56□□□□□ -2
Ptchd3Q0EEE2 AC123803.1-201ENSMUST00000216093 189 ntBASIC2.56□□□□□ -2
Ptchd3Q0EEE2 AC116589.7-201ENSMUST00000221061 239 ntBASIC2.56□□□□□ -2
Ptchd3Q0EEE2 AC138401.1-201ENSMUST00000221533 116 ntBASIC2.56□□□□□ -2
Ptchd3Q0EEE2 AC164117.1-201ENSMUST00000221726 239 ntBASIC2.56□□□□□ -2
Ptchd3Q0EEE2 Gm35558-203ENSMUST00000222264 204 ntBASIC2.56□□□□□ -2
Ptchd3Q0EEE2 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.56□□□□□ -2
Ptchd3Q0EEE2 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC2.56□□□□□ -2
Ptchd3Q0EEE2 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Ptchd3Q0EEE2 Gm26228-201ENSMUST00000082512 107 ntBASIC2.56□□□□□ -2
Ptchd3Q0EEE2 Gm25080-201ENSMUST00000082526 107 ntBASIC2.56□□□□□ -2
Ptchd3Q0EEE2 Gm25859-201ENSMUST00000083710 91 ntBASIC2.56□□□□□ -2
Ptchd3Q0EEE2 Gm25518-201ENSMUST00000083864 107 ntBASIC2.56□□□□□ -2
Ptchd3Q0EEE2 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC2.56□□□□□ -2
Ptchd3Q0EEE2 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Ptchd3Q0EEE2 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Ptchd3Q0EEE2 Gm5596-201ENSMUST00000207988 2421 ntBASIC2.56□□□□□ -2
Ptchd3Q0EEE2 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Ptchd3Q0EEE2 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.55□□□□□ -2
Ptchd3Q0EEE2 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Ptchd3Q0EEE2 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Ptchd3Q0EEE2 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.55□□□□□ -2
Ptchd3Q0EEE2 Gm14429-201ENSMUST00000121881 2024 ntBASIC2.55□□□□□ -2
Ptchd3Q0EEE2 Gm13368-201ENSMUST00000122443 430 ntBASIC2.55□□□□□ -2
Ptchd3Q0EEE2 n-R5s80-201ENSMUST00000122596 111 ntBASIC2.55□□□□□ -2
Ptchd3Q0EEE2 Gm25163-201ENSMUST00000158905 104 ntBASIC2.55□□□□□ -2
Ptchd3Q0EEE2 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.55□□□□□ -2
Ptchd3Q0EEE2 Gm22631-201ENSMUST00000179656 94 ntBASIC2.55□□□□□ -2
Ptchd3Q0EEE2 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC2.55□□□□□ -2
Ptchd3Q0EEE2 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.55□□□□□ -2
Ptchd3Q0EEE2 Gm28151-201ENSMUST00000189404 951 ntBASIC2.55□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 115.6 ms