Protein–RNA interactions for Protein: Q08943

Ssrp1, FACT complex subunit SSRP1, mousemouse

Known RBP Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssrp1Q08943 Gm28909-201ENSMUST00000189406 315 ntBASIC4.01□□□□□ -1.77
Ssrp1Q08943 Gm28705-201ENSMUST00000189548 315 ntBASIC4.01□□□□□ -1.77
Ssrp1Q08943 Gm28861-201ENSMUST00000189681 315 ntBASIC4.01□□□□□ -1.77
Ssrp1Q08943 Gm29180-201ENSMUST00000190003 315 ntBASIC4.01□□□□□ -1.77
Ssrp1Q08943 Gm28939-201ENSMUST00000190351 315 ntBASIC4.01□□□□□ -1.77
Ssrp1Q08943 Gm28223-201ENSMUST00000190469 315 ntBASIC4.01□□□□□ -1.77
Ssrp1Q08943 Gm29575-201ENSMUST00000190597 315 ntBASIC4.01□□□□□ -1.77
Ssrp1Q08943 Gm29092-201ENSMUST00000190768 315 ntBASIC4.01□□□□□ -1.77
Ssrp1Q08943 Gm29469-201ENSMUST00000191448 315 ntBASIC4.01□□□□□ -1.77
Ssrp1Q08943 Gm43814-201ENSMUST00000197851 413 ntBASIC4.01□□□□□ -1.77
Ssrp1Q08943 Gm44703-201ENSMUST00000205724 248 ntBASIC4.01□□□□□ -1.77
Ssrp1Q08943 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC4.01□□□□□ -1.77
Ssrp1Q08943 Gm45395-201ENSMUST00000209891 559 ntBASIC4.01□□□□□ -1.77
Ssrp1Q08943 AC091783.5-201ENSMUST00000224928 671 ntBASIC4.01□□□□□ -1.77
Ssrp1Q08943 AC167669.1-201ENSMUST00000224932 384 ntBASIC4.01□□□□□ -1.77
Ssrp1Q08943 AC170600.1-201ENSMUST00000228763 277 ntBASIC4.01□□□□□ -1.77
Ssrp1Q08943 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC4.01□□□□□ -1.77
Ssrp1Q08943 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Ssrp1Q08943 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ssrp1Q08943 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC4□□□□□ -1.77
Ssrp1Q08943 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC4□□□□□ -1.77
Ssrp1Q08943 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC4□□□□□ -1.77
Ssrp1Q08943 Gm16005-201ENSMUST00000120515 269 ntBASIC4□□□□□ -1.77
Ssrp1Q08943 Gm26276-201ENSMUST00000157099 109 ntBASIC4□□□□□ -1.77
Ssrp1Q08943 Gm24885-201ENSMUST00000158783 270 ntBASIC4□□□□□ -1.77
Ssrp1Q08943 Gm27903-201ENSMUST00000175482 126 ntBASIC4□□□□□ -1.77
Ssrp1Q08943 AC129202.3-201ENSMUST00000224413 733 ntBASIC4□□□□□ -1.77
Ssrp1Q08943 AC156790.5-201ENSMUST00000227075 231 ntBASIC4□□□□□ -1.77
Ssrp1Q08943 Gm25581-201ENSMUST00000083410 164 ntBASIC4□□□□□ -1.77
Ssrp1Q08943 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Ssrp1Q08943 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC4□□□□□ -1.77
Ssrp1Q08943 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Ssrp1Q08943 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
Ssrp1Q08943 Gm650-201ENSMUST00000144428 1551 ntBASIC3.99□□□□□ -1.77
Ssrp1Q08943 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.99□□□□□ -1.77
Ssrp1Q08943 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Ssrp1Q08943 Gm14810-201ENSMUST00000121628 486 ntBASIC3.99□□□□□ -1.77
Ssrp1Q08943 Gm13419-201ENSMUST00000121711 271 ntBASIC3.99□□□□□ -1.77
Ssrp1Q08943 Gm25107-201ENSMUST00000122472 129 ntBASIC3.99□□□□□ -1.77
Ssrp1Q08943 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
Ssrp1Q08943 Gm22277-201ENSMUST00000157204 277 ntBASIC3.99□□□□□ -1.77
Ssrp1Q08943 Gm24481-201ENSMUST00000157210 102 ntBASIC3.99□□□□□ -1.77
Ssrp1Q08943 Gm22521-201ENSMUST00000158272 134 ntBASIC3.99□□□□□ -1.77
Ssrp1Q08943 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC3.99□□□□□ -1.77
Ssrp1Q08943 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.99□□□□□ -1.77
Ssrp1Q08943 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC3.99□□□□□ -1.77
Ssrp1Q08943 Gm6947-201ENSMUST00000186254 78 ntBASIC3.99□□□□□ -1.77
Ssrp1Q08943 Gm37239-201ENSMUST00000193510 141 ntBASIC3.99□□□□□ -1.77
Ssrp1Q08943 Igkv4-65-201ENSMUST00000196986 358 ntBASIC3.99□□□□□ -1.77
Ssrp1Q08943 Gm43739-201ENSMUST00000198294 307 ntBASIC3.99□□□□□ -1.77
Ssrp1Q08943 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.99□□□□□ -1.77
Ssrp1Q08943 Gm44881-201ENSMUST00000205425 367 ntBASIC3.99□□□□□ -1.77
Ssrp1Q08943 AC130829.3-201ENSMUST00000222735 154 ntBASIC3.99□□□□□ -1.77
Ssrp1Q08943 AC140344.1-201ENSMUST00000223384 387 ntBASIC3.99□□□□□ -1.77
Ssrp1Q08943 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Ssrp1Q08943 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC3.99□□□□□ -1.77
Ssrp1Q08943 Gm25800-201ENSMUST00000082636 134 ntBASIC3.99□□□□□ -1.77
Ssrp1Q08943 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Ssrp1Q08943 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Ssrp1Q08943 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Ssrp1Q08943 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Ssrp1Q08943 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Ssrp1Q08943 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Ssrp1Q08943 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
Ssrp1Q08943 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Ssrp1Q08943 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
Ssrp1Q08943 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Ssrp1Q08943 Gm26387-201ENSMUST00000104238 132 ntBASIC3.98□□□□□ -1.77
Ssrp1Q08943 Gm11704-201ENSMUST00000120031 214 ntBASIC3.98□□□□□ -1.77
Ssrp1Q08943 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC3.98□□□□□ -1.77
Ssrp1Q08943 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Ssrp1Q08943 Gm25427-201ENSMUST00000157605 103 ntBASIC3.98□□□□□ -1.77
Ssrp1Q08943 Gm23704-201ENSMUST00000158844 340 ntBASIC3.98□□□□□ -1.77
Ssrp1Q08943 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.98□□□□□ -1.77
Ssrp1Q08943 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Ssrp1Q08943 Gm26460-201ENSMUST00000175061 126 ntBASIC3.98□□□□□ -1.77
Ssrp1Q08943 Gm25198-201ENSMUST00000178574 110 ntBASIC3.98□□□□□ -1.77
Ssrp1Q08943 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC3.98□□□□□ -1.77
Ssrp1Q08943 Gm6615-201ENSMUST00000199426 631 ntBASIC3.98□□□□□ -1.77
Ssrp1Q08943 Gm45207-201ENSMUST00000207469 145 ntBASIC3.98□□□□□ -1.77
Ssrp1Q08943 Gm44655-201ENSMUST00000207768 423 ntBASIC3.98□□□□□ -1.77
Ssrp1Q08943 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
Ssrp1Q08943 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.98□□□□□ -1.77
Ssrp1Q08943 AC113031.4-201ENSMUST00000228381 514 ntBASIC3.98□□□□□ -1.77
Ssrp1Q08943 Gm26447-201ENSMUST00000082448 129 ntBASIC3.98□□□□□ -1.77
Ssrp1Q08943 Gm22806-201ENSMUST00000082738 136 ntBASIC3.98□□□□□ -1.77
Ssrp1Q08943 Gm22353-201ENSMUST00000083918 136 ntBASIC3.98□□□□□ -1.77
Ssrp1Q08943 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Ssrp1Q08943 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Ssrp1Q08943 Gm36989-201ENSMUST00000193225 2160 ntBASIC3.97□□□□□ -1.77
Ssrp1Q08943 Gm45557-201ENSMUST00000210004 1651 ntBASIC3.97□□□□□ -1.77
Ssrp1Q08943 Gm37236-201ENSMUST00000193670 3249 ntBASIC3.97□□□□□ -1.77
Ssrp1Q08943 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Ssrp1Q08943 Gm24096-201ENSMUST00000103905 110 ntBASIC3.97□□□□□ -1.77
Ssrp1Q08943 Gm7123-201ENSMUST00000117647 213 ntBASIC3.97□□□□□ -1.77
Ssrp1Q08943 Gm14593-201ENSMUST00000119948 294 ntBASIC3.97□□□□□ -1.77
Ssrp1Q08943 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC3.97□□□□□ -1.77
Ssrp1Q08943 Gm23196-201ENSMUST00000158806 107 ntBASIC3.97□□□□□ -1.77
Ssrp1Q08943 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Ssrp1Q08943 Gm9830-201ENSMUST00000178509 357 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms