Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 AC152062.1-201ENSMUST00000218129 386 ntBASIC3.52□□□□□ -1.85
Col8a1Q00780 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC3.52□□□□□ -1.85
Col8a1Q00780 AC126253.2-201ENSMUST00000226518 205 ntBASIC3.52□□□□□ -1.85
Col8a1Q00780 Snord82-201ENSMUST00000082889 70 ntBASIC3.52□□□□□ -1.85
Col8a1Q00780 Gm22297-201ENSMUST00000083312 106 ntBASIC3.52□□□□□ -1.85
Col8a1Q00780 Gm10813-201ENSMUST00000099936 90 ntBASIC3.52□□□□□ -1.85
Col8a1Q00780 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
Col8a1Q00780 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
Col8a1Q00780 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Col8a1Q00780 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
Col8a1Q00780 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Col8a1Q00780 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC3.52□□□□□ -1.85
Col8a1Q00780 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Col8a1Q00780 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Col8a1Q00780 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
Col8a1Q00780 Gm42552-201ENSMUST00000196754 4497 ntBASIC3.51□□□□□ -1.85
Col8a1Q00780 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC3.51□□□□□ -1.85
Col8a1Q00780 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
Col8a1Q00780 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Col8a1Q00780 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Col8a1Q00780 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
Col8a1Q00780 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Col8a1Q00780 Gm25272-201ENSMUST00000104293 128 ntBASIC3.51□□□□□ -1.85
Col8a1Q00780 Gm13557-201ENSMUST00000120771 382 ntBASIC3.51□□□□□ -1.85
Col8a1Q00780 Gm25392-201ENSMUST00000157335 297 ntBASIC3.51□□□□□ -1.85
Col8a1Q00780 Gm23755-201ENSMUST00000157578 343 ntBASIC3.51□□□□□ -1.85
Col8a1Q00780 Gm25599-201ENSMUST00000157816 103 ntBASIC3.51□□□□□ -1.85
Col8a1Q00780 Gm24850-201ENSMUST00000158029 119 ntBASIC3.51□□□□□ -1.85
Col8a1Q00780 Gm24392-201ENSMUST00000158136 103 ntBASIC3.51□□□□□ -1.85
Col8a1Q00780 Gm25015-201ENSMUST00000158400 128 ntBASIC3.51□□□□□ -1.85
Col8a1Q00780 Gm24005-201ENSMUST00000158459 296 ntBASIC3.51□□□□□ -1.85
Col8a1Q00780 Gm26022-201ENSMUST00000158663 108 ntBASIC3.51□□□□□ -1.85
Col8a1Q00780 Gm24667-201ENSMUST00000158938 103 ntBASIC3.51□□□□□ -1.85
Col8a1Q00780 Gm17187-201ENSMUST00000164622 410 ntBASIC3.51□□□□□ -1.85
Col8a1Q00780 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC3.51□□□□□ -1.85
Col8a1Q00780 Gm23365-201ENSMUST00000175019 125 ntBASIC3.51□□□□□ -1.85
Col8a1Q00780 Gm25960-201ENSMUST00000175110 125 ntBASIC3.51□□□□□ -1.85
Col8a1Q00780 Gm44453-201ENSMUST00000175161 126 ntBASIC3.51□□□□□ -1.85
Col8a1Q00780 Gm25195-201ENSMUST00000177656 126 ntBASIC3.51□□□□□ -1.85
Col8a1Q00780 Gm10067-201ENSMUST00000179462 348 ntBASIC3.51□□□□□ -1.85
Col8a1Q00780 Mir6914-201ENSMUST00000184999 69 ntBASIC3.51□□□□□ -1.85
Col8a1Q00780 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.51□□□□□ -1.85
Col8a1Q00780 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC3.51□□□□□ -1.85
Col8a1Q00780 Gm37162-201ENSMUST00000191708 551 ntBASIC3.51□□□□□ -1.85
Col8a1Q00780 Gm9402-201ENSMUST00000196849 388 ntBASIC3.51□□□□□ -1.85
Col8a1Q00780 Gm42451-201ENSMUST00000197410 244 ntBASIC3.51□□□□□ -1.85
Col8a1Q00780 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.51□□□□□ -1.85
Col8a1Q00780 Gm44371-201ENSMUST00000204148 467 ntBASIC3.51□□□□□ -1.85
Col8a1Q00780 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC3.51□□□□□ -1.85
Col8a1Q00780 Fth-ps3-201ENSMUST00000210405 358 ntBASIC3.51□□□□□ -1.85
Col8a1Q00780 Gm6842-201ENSMUST00000211361 390 ntBASIC3.51□□□□□ -1.85
Col8a1Q00780 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.51□□□□□ -1.85
Col8a1Q00780 AC155923.1-201ENSMUST00000215676 356 ntBASIC3.51□□□□□ -1.85
Col8a1Q00780 Gm17829-201ENSMUST00000219782 344 ntBASIC3.51□□□□□ -1.85
Col8a1Q00780 AC164561.1-201ENSMUST00000220414 115 ntBASIC3.51□□□□□ -1.85
Col8a1Q00780 AC115291.2-201ENSMUST00000228335 437 ntBASIC3.51□□□□□ -1.85
Col8a1Q00780 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Col8a1Q00780 Gm22685-201ENSMUST00000082848 106 ntBASIC3.51□□□□□ -1.85
Col8a1Q00780 Gm23650-201ENSMUST00000083355 70 ntBASIC3.51□□□□□ -1.85
Col8a1Q00780 Gm7381-201ENSMUST00000098958 300 ntBASIC3.51□□□□□ -1.85
Col8a1Q00780 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Col8a1Q00780 AC152981.1-201ENSMUST00000218320 2480 ntBASIC3.51□□□□□ -1.85
Col8a1Q00780 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Col8a1Q00780 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC3.51□□□□□ -1.85
Col8a1Q00780 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC3.51□□□□□ -1.85
Col8a1Q00780 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Col8a1Q00780 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Col8a1Q00780 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
Col8a1Q00780 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
Col8a1Q00780 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
Col8a1Q00780 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.5□□□□□ -1.85
Col8a1Q00780 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Col8a1Q00780 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
Col8a1Q00780 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Col8a1Q00780 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
Col8a1Q00780 Gm24951-201ENSMUST00000102182 109 ntBASIC3.5□□□□□ -1.85
Col8a1Q00780 Gm24831-201ENSMUST00000116778 126 ntBASIC3.5□□□□□ -1.85
Col8a1Q00780 Gm13386-201ENSMUST00000117677 124 ntBASIC3.5□□□□□ -1.85
Col8a1Q00780 Gm12797-201ENSMUST00000118645 273 ntBASIC3.5□□□□□ -1.85
Col8a1Q00780 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.5□□□□□ -1.85
Col8a1Q00780 Gm14875-201ENSMUST00000120881 319 ntBASIC3.5□□□□□ -1.85
Col8a1Q00780 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC3.5□□□□□ -1.85
Col8a1Q00780 Gm14473-201ENSMUST00000122269 557 ntBASIC3.5□□□□□ -1.85
Col8a1Q00780 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Col8a1Q00780 Gm25456-201ENSMUST00000157952 109 ntBASIC3.5□□□□□ -1.85
Col8a1Q00780 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.5□□□□□ -1.85
Col8a1Q00780 Gm23002-201ENSMUST00000179221 107 ntBASIC3.5□□□□□ -1.85
Col8a1Q00780 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC3.5□□□□□ -1.85
Col8a1Q00780 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Col8a1Q00780 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC3.5□□□□□ -1.85
Col8a1Q00780 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC3.5□□□□□ -1.85
Col8a1Q00780 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.5□□□□□ -1.85
Col8a1Q00780 Gm22061-201ENSMUST00000082557 107 ntBASIC3.5□□□□□ -1.85
Col8a1Q00780 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC3.5□□□□□ -1.85
Col8a1Q00780 Gm37742-201ENSMUST00000193263 3979 ntBASIC3.5□□□□□ -1.85
Col8a1Q00780 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Col8a1Q00780 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Col8a1Q00780 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Col8a1Q00780 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Col8a1Q00780 Hm629797-201ENSMUST00000183645 2398 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 374 ms