Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 CT009713.6-201ENSMUST00000223615 294 ntBASIC3.05□□□□□ -1.92
CiitaP79621 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CiitaP79621 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CiitaP79621 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
CiitaP79621 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
CiitaP79621 Gm15084-201ENSMUST00000178585 1502 ntBASIC3.04□□□□□ -1.92
CiitaP79621 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
CiitaP79621 Gm25500-201ENSMUST00000104426 123 ntBASIC3.04□□□□□ -1.92
CiitaP79621 Gm26414-201ENSMUST00000157674 269 ntBASIC3.04□□□□□ -1.92
CiitaP79621 Gm27608-201ENSMUST00000184822 162 ntBASIC3.04□□□□□ -1.92
CiitaP79621 Gm28151-201ENSMUST00000189404 951 ntBASIC3.04□□□□□ -1.92
CiitaP79621 Gm29950-201ENSMUST00000195273 237 ntBASIC3.04□□□□□ -1.92
CiitaP79621 Gm43355-201ENSMUST00000196541 346 ntBASIC3.04□□□□□ -1.92
CiitaP79621 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CiitaP79621 Gm26228-201ENSMUST00000082512 107 ntBASIC3.04□□□□□ -1.92
CiitaP79621 Snora23-201ENSMUST00000082517 184 ntBASIC3.04□□□□□ -1.92
CiitaP79621 Gm25080-201ENSMUST00000082526 107 ntBASIC3.04□□□□□ -1.92
CiitaP79621 Gm26458-201ENSMUST00000082832 128 ntBASIC3.04□□□□□ -1.92
CiitaP79621 Gm25518-201ENSMUST00000083864 107 ntBASIC3.04□□□□□ -1.92
CiitaP79621 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CiitaP79621 AC124426.1-203ENSMUST00000221814 1362 ntBASIC3.03□□□□□ -1.92
CiitaP79621 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CiitaP79621 Gm12806-201ENSMUST00000119384 268 ntBASIC3.03□□□□□ -1.92
CiitaP79621 Gm15106-201ENSMUST00000119691 821 ntBASIC3.03□□□□□ -1.92
CiitaP79621 Gm9225-201ENSMUST00000121921 836 ntBASIC3.03□□□□□ -1.92
CiitaP79621 Gm22038-201ENSMUST00000157277 242 ntBASIC3.03□□□□□ -1.92
CiitaP79621 Gm24546-201ENSMUST00000158652 102 ntBASIC3.03□□□□□ -1.92
CiitaP79621 Gm9071-201ENSMUST00000165915 474 ntBASIC3.03□□□□□ -1.92
CiitaP79621 Gm22853-201ENSMUST00000174974 131 ntBASIC3.03□□□□□ -1.92
CiitaP79621 Gm22131-201ENSMUST00000178415 94 ntBASIC3.03□□□□□ -1.92
CiitaP79621 Mir6405-201ENSMUST00000184584 124 ntBASIC3.03□□□□□ -1.92
CiitaP79621 Gm37081-201ENSMUST00000192034 196 ntBASIC3.03□□□□□ -1.92
CiitaP79621 Gm37550-201ENSMUST00000193230 463 ntBASIC3.03□□□□□ -1.92
CiitaP79621 Igkv4-60-201ENSMUST00000200639 358 ntBASIC3.03□□□□□ -1.92
CiitaP79621 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC3.03□□□□□ -1.92
CiitaP79621 Gm18113-201ENSMUST00000220630 303 ntBASIC3.03□□□□□ -1.92
CiitaP79621 AC138401.1-201ENSMUST00000221533 116 ntBASIC3.03□□□□□ -1.92
CiitaP79621 AC140477.1-201ENSMUST00000222354 246 ntBASIC3.03□□□□□ -1.92
CiitaP79621 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
CiitaP79621 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC3.03□□□□□ -1.93
CiitaP79621 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CiitaP79621 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CiitaP79621 Gm15975-201ENSMUST00000122385 1402 ntBASIC3.02□□□□□ -1.93
CiitaP79621 Gm38083-201ENSMUST00000194758 3498 ntBASIC3.02□□□□□ -1.93
CiitaP79621 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CiitaP79621 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CiitaP79621 Gm381-201ENSMUST00000117443 2037 ntBASIC3.02□□□□□ -1.93
CiitaP79621 Gm44821-201ENSMUST00000208212 2002 ntBASIC3.02□□□□□ -1.93
CiitaP79621 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC3.02□□□□□ -1.93
CiitaP79621 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.02□□□□□ -1.93
CiitaP79621 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
CiitaP79621 Gm23128-201ENSMUST00000104257 132 ntBASIC3.02□□□□□ -1.93
CiitaP79621 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CiitaP79621 Gm15094-201ENSMUST00000118394 1131 ntBASIC3.02□□□□□ -1.93
CiitaP79621 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CiitaP79621 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC3.02□□□□□ -1.93
CiitaP79621 Gm24691-201ENSMUST00000157762 140 ntBASIC3.02□□□□□ -1.93
CiitaP79621 Gm25163-201ENSMUST00000158905 104 ntBASIC3.02□□□□□ -1.93
CiitaP79621 Mir7081-201ENSMUST00000184490 75 ntBASIC3.02□□□□□ -1.93
CiitaP79621 Gm6060-201ENSMUST00000188671 251 ntBASIC3.02□□□□□ -1.93
CiitaP79621 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC3.02□□□□□ -1.93
CiitaP79621 Gm23128-202ENSMUST00000196578 133 ntBASIC3.02□□□□□ -1.93
CiitaP79621 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC3.02□□□□□ -1.93
CiitaP79621 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC3.02□□□□□ -1.93
CiitaP79621 AC123803.1-201ENSMUST00000216093 189 ntBASIC3.02□□□□□ -1.93
CiitaP79621 AC069561.2-201ENSMUST00000217596 420 ntBASIC3.02□□□□□ -1.93
CiitaP79621 Gm7422-201ENSMUST00000220115 640 ntBASIC3.02□□□□□ -1.93
CiitaP79621 Gm19441-201ENSMUST00000221545 330 ntBASIC3.02□□□□□ -1.93
CiitaP79621 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CiitaP79621 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC3.02□□□□□ -1.93
CiitaP79621 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
CiitaP79621 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.01□□□□□ -1.93
CiitaP79621 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CiitaP79621 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CiitaP79621 AC164164.1-201ENSMUST00000223245 2340 ntBASIC3.01□□□□□ -1.93
CiitaP79621 Gm12433-201ENSMUST00000119659 255 ntBASIC3.01□□□□□ -1.93
CiitaP79621 Gm7327-201ENSMUST00000120925 652 ntBASIC3.01□□□□□ -1.93
CiitaP79621 Gm16411-201ENSMUST00000122164 1100 ntBASIC3.01□□□□□ -1.93
CiitaP79621 Gm24839-201ENSMUST00000122602 107 ntBASIC3.01□□□□□ -1.93
CiitaP79621 Gm23470-201ENSMUST00000157129 120 ntBASIC3.01□□□□□ -1.93
CiitaP79621 Gm23137-201ENSMUST00000157559 107 ntBASIC3.01□□□□□ -1.93
CiitaP79621 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
CiitaP79621 Gm8114-201ENSMUST00000172225 484 ntBASIC3.01□□□□□ -1.93
CiitaP79621 Gm23268-201ENSMUST00000175494 78 ntBASIC3.01□□□□□ -1.93
CiitaP79621 Gm37119-201ENSMUST00000195691 389 ntBASIC3.01□□□□□ -1.93
CiitaP79621 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC3.01□□□□□ -1.93
CiitaP79621 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
CiitaP79621 Gm43780-201ENSMUST00000196510 3600 ntBASIC3□□□□□ -1.93
CiitaP79621 Gm24889-201ENSMUST00000104388 132 ntBASIC3□□□□□ -1.93
CiitaP79621 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
CiitaP79621 Gm14558-201ENSMUST00000117458 381 ntBASIC3□□□□□ -1.93
CiitaP79621 Gm14897-201ENSMUST00000118213 207 ntBASIC3□□□□□ -1.93
CiitaP79621 Gm14877-201ENSMUST00000119803 478 ntBASIC3□□□□□ -1.93
CiitaP79621 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC3□□□□□ -1.93
CiitaP79621 Gm14629-201ENSMUST00000122428 144 ntBASIC3□□□□□ -1.93
CiitaP79621 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC3□□□□□ -1.93
CiitaP79621 Gm25559-201ENSMUST00000157182 74 ntBASIC3□□□□□ -1.93
CiitaP79621 Gm26214-201ENSMUST00000158581 107 ntBASIC3□□□□□ -1.93
CiitaP79621 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC3□□□□□ -1.93
CiitaP79621 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC3□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 94.4 ms