Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC4.7□□□□□ -1.66
Rfx1P48377 Gm2182-201ENSMUST00000145243 663 ntBASIC4.7□□□□□ -1.66
Rfx1P48377 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC4.7□□□□□ -1.66
Rfx1P48377 Gm25450-201ENSMUST00000179144 107 ntBASIC4.7□□□□□ -1.66
Rfx1P48377 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC4.7□□□□□ -1.66
Rfx1P48377 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC4.7□□□□□ -1.66
Rfx1P48377 Gm37417-201ENSMUST00000195257 454 ntBASIC4.7□□□□□ -1.66
Rfx1P48377 Gm4248-201ENSMUST00000196905 316 ntBASIC4.7□□□□□ -1.66
Rfx1P48377 Gm19244-201ENSMUST00000204340 253 ntBASIC4.7□□□□□ -1.66
Rfx1P48377 Gm25896-201ENSMUST00000083713 136 ntBASIC4.7□□□□□ -1.66
Rfx1P48377 Gm22350-201ENSMUST00000083924 156 ntBASIC4.7□□□□□ -1.66
Rfx1P48377 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.7□□□□□ -1.66
Rfx1P48377 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC4.7□□□□□ -1.66
Rfx1P48377 Gm37006-201ENSMUST00000195253 2674 ntBASIC4.69□□□□□ -1.66
Rfx1P48377 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC4.69□□□□□ -1.66
Rfx1P48377 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Rfx1P48377 AC167360.1-201ENSMUST00000222596 2494 ntBASIC4.69□□□□□ -1.66
Rfx1P48377 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Rfx1P48377 Gm24671-201ENSMUST00000104159 158 ntBASIC4.69□□□□□ -1.66
Rfx1P48377 n-R5s67-201ENSMUST00000104336 114 ntBASIC4.69□□□□□ -1.66
Rfx1P48377 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC4.69□□□□□ -1.66
Rfx1P48377 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC4.69□□□□□ -1.66
Rfx1P48377 Gm12190-201ENSMUST00000120001 187 ntBASIC4.69□□□□□ -1.66
Rfx1P48377 Gm8244-201ENSMUST00000121254 264 ntBASIC4.69□□□□□ -1.66
Rfx1P48377 n-R5s87-201ENSMUST00000122752 116 ntBASIC4.69□□□□□ -1.66
Rfx1P48377 Gm22637-201ENSMUST00000158144 283 ntBASIC4.69□□□□□ -1.66
Rfx1P48377 Gm25749-201ENSMUST00000175485 111 ntBASIC4.69□□□□□ -1.66
Rfx1P48377 Gm28921-201ENSMUST00000190219 378 ntBASIC4.69□□□□□ -1.66
Rfx1P48377 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC4.69□□□□□ -1.66
Rfx1P48377 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC4.69□□□□□ -1.66
Rfx1P48377 Gm9377-201ENSMUST00000207227 623 ntBASIC4.69□□□□□ -1.66
Rfx1P48377 Gm45434-201ENSMUST00000210550 293 ntBASIC4.69□□□□□ -1.66
Rfx1P48377 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC4.69□□□□□ -1.66
Rfx1P48377 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
Rfx1P48377 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Rfx1P48377 Gm37672-201ENSMUST00000192682 4014 ntBASIC4.69□□□□□ -1.66
Rfx1P48377 AC126033.1-201ENSMUST00000227628 6773 ntBASIC4.68□□□□□ -1.66
Rfx1P48377 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Rfx1P48377 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Rfx1P48377 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Rfx1P48377 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Rfx1P48377 Gm26273-201ENSMUST00000104180 131 ntBASIC4.68□□□□□ -1.66
Rfx1P48377 Gm24640-201ENSMUST00000116949 126 ntBASIC4.68□□□□□ -1.66
Rfx1P48377 Gm22626-201ENSMUST00000116990 126 ntBASIC4.68□□□□□ -1.66
Rfx1P48377 Gm12427-201ENSMUST00000117719 302 ntBASIC4.68□□□□□ -1.66
Rfx1P48377 Gm14877-201ENSMUST00000119803 478 ntBASIC4.68□□□□□ -1.66
Rfx1P48377 Gm23789-201ENSMUST00000122536 301 ntBASIC4.68□□□□□ -1.66
Rfx1P48377 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC4.68□□□□□ -1.66
Rfx1P48377 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Rfx1P48377 Gm26036-201ENSMUST00000158149 144 ntBASIC4.68□□□□□ -1.66
Rfx1P48377 Gm23474-201ENSMUST00000158884 75 ntBASIC4.68□□□□□ -1.66
Rfx1P48377 Gm22398-201ENSMUST00000174941 125 ntBASIC4.68□□□□□ -1.66
Rfx1P48377 Gm25731-201ENSMUST00000175167 125 ntBASIC4.68□□□□□ -1.66
Rfx1P48377 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC4.68□□□□□ -1.66
Rfx1P48377 Gm20630-201ENSMUST00000177387 551 ntBASIC4.68□□□□□ -1.66
Rfx1P48377 Gm6660-201ENSMUST00000179149 468 ntBASIC4.68□□□□□ -1.66
Rfx1P48377 Gm24761-201ENSMUST00000179589 127 ntBASIC4.68□□□□□ -1.66
Rfx1P48377 Gm24488-201ENSMUST00000179934 127 ntBASIC4.68□□□□□ -1.66
Rfx1P48377 Gm25701-201ENSMUST00000179988 127 ntBASIC4.68□□□□□ -1.66
Rfx1P48377 Gm26431-201ENSMUST00000180199 127 ntBASIC4.68□□□□□ -1.66
Rfx1P48377 Gm27564-201ENSMUST00000185196 96 ntBASIC4.68□□□□□ -1.66
Rfx1P48377 Gm19620-201ENSMUST00000195972 434 ntBASIC4.68□□□□□ -1.66
Rfx1P48377 Gm42451-201ENSMUST00000197410 244 ntBASIC4.68□□□□□ -1.66
Rfx1P48377 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC4.68□□□□□ -1.66
Rfx1P48377 Gm45209-201ENSMUST00000207122 353 ntBASIC4.68□□□□□ -1.66
Rfx1P48377 AC155715.1-201ENSMUST00000213575 463 ntBASIC4.68□□□□□ -1.66
Rfx1P48377 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Rfx1P48377 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC4.68□□□□□ -1.66
Rfx1P48377 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Rfx1P48377 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Rfx1P48377 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Rfx1P48377 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Rfx1P48377 Gm24282-201ENSMUST00000104232 66 ntBASIC4.67□□□□□ -1.66
Rfx1P48377 Gm13729-201ENSMUST00000120328 406 ntBASIC4.67□□□□□ -1.66
Rfx1P48377 Gm14473-201ENSMUST00000122269 557 ntBASIC4.67□□□□□ -1.66
Rfx1P48377 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC4.67□□□□□ -1.66
Rfx1P48377 Gm26085-201ENSMUST00000157900 116 ntBASIC4.67□□□□□ -1.66
Rfx1P48377 Gm22447-201ENSMUST00000158155 92 ntBASIC4.67□□□□□ -1.66
Rfx1P48377 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC4.67□□□□□ -1.66
Rfx1P48377 Gm24084-201ENSMUST00000175173 137 ntBASIC4.67□□□□□ -1.66
Rfx1P48377 Gm19898-201ENSMUST00000177490 251 ntBASIC4.67□□□□□ -1.66
Rfx1P48377 Gm28744-201ENSMUST00000189939 340 ntBASIC4.67□□□□□ -1.66
Rfx1P48377 Gm18429-201ENSMUST00000198707 421 ntBASIC4.67□□□□□ -1.66
Rfx1P48377 Gm43651-201ENSMUST00000199796 439 ntBASIC4.67□□□□□ -1.66
Rfx1P48377 Gm45317-201ENSMUST00000210385 223 ntBASIC4.67□□□□□ -1.66
Rfx1P48377 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Rfx1P48377 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Rfx1P48377 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Rfx1P48377 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Rfx1P48377 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Rfx1P48377 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
Rfx1P48377 AC153948.1-201ENSMUST00000219080 3838 ntBASIC4.67□□□□□ -1.66
Rfx1P48377 AC117226.1-201ENSMUST00000221635 3737 ntBASIC4.67□□□□□ -1.66
Rfx1P48377 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Rfx1P48377 Gm45176-201ENSMUST00000207696 4096 ntBASIC4.66□□□□□ -1.66
Rfx1P48377 Gm18609-201ENSMUST00000203370 3601 ntBASIC4.66□□□□□ -1.66
Rfx1P48377 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Rfx1P48377 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Rfx1P48377 Gm43715-201ENSMUST00000196307 2715 ntBASIC4.66□□□□□ -1.66
Rfx1P48377 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 109.7 ms