Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 AC154271.1-201ENSMUST00000224780 383 ntBASIC1.6□□□□□ -2.15
Cdx2P43241 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.6□□□□□ -2.15
Cdx2P43241 AC133076.1-201ENSMUST00000228074 484 ntBASIC1.6□□□□□ -2.15
Cdx2P43241 CT030238.4-201ENSMUST00000228579 801 ntBASIC1.6□□□□□ -2.15
Cdx2P43241 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC1.6□□□□□ -2.15
Cdx2P43241 Gm24151-201ENSMUST00000082758 141 ntBASIC1.6□□□□□ -2.15
Cdx2P43241 Mir93-201ENSMUST00000083593 88 ntBASIC1.6□□□□□ -2.15
Cdx2P43241 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Cdx2P43241 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Cdx2P43241 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Cdx2P43241 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC1.59□□□□□ -2.15
Cdx2P43241 Igkv13-87-201ENSMUST00000114214 286 ntBASIC1.59□□□□□ -2.15
Cdx2P43241 Gm13087-201ENSMUST00000118298 256 ntBASIC1.59□□□□□ -2.15
Cdx2P43241 Gm14669-201ENSMUST00000118841 250 ntBASIC1.59□□□□□ -2.15
Cdx2P43241 Gm5646-201ENSMUST00000120568 714 ntBASIC1.59□□□□□ -2.15
Cdx2P43241 Gm15115-201ENSMUST00000121145 264 ntBASIC1.59□□□□□ -2.15
Cdx2P43241 Gm12926-201ENSMUST00000121158 409 ntBASIC1.59□□□□□ -2.15
Cdx2P43241 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC1.59□□□□□ -2.15
Cdx2P43241 Gm15692-201ENSMUST00000152173 352 ntBASIC1.59□□□□□ -2.15
Cdx2P43241 Gm2878-201ENSMUST00000170173 486 ntBASIC1.59□□□□□ -2.15
Cdx2P43241 Gm24572-201ENSMUST00000175505 88 ntBASIC1.59□□□□□ -2.15
Cdx2P43241 Gm26365-201ENSMUST00000179177 94 ntBASIC1.59□□□□□ -2.15
Cdx2P43241 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
Cdx2P43241 Gm27715-201ENSMUST00000184714 260 ntBASIC1.59□□□□□ -2.15
Cdx2P43241 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
Cdx2P43241 Gm7871-201ENSMUST00000195346 618 ntBASIC1.59□□□□□ -2.15
Cdx2P43241 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC1.59□□□□□ -2.15
Cdx2P43241 Gm20304-201ENSMUST00000218168 444 ntBASIC1.59□□□□□ -2.15
Cdx2P43241 CT009764.1-201ENSMUST00000222260 483 ntBASIC1.59□□□□□ -2.15
Cdx2P43241 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Cdx2P43241 Snord14d-201ENSMUST00000083424 86 ntBASIC1.59□□□□□ -2.15
Cdx2P43241 Mir320-201ENSMUST00000083594 82 ntBASIC1.59□□□□□ -2.15
Cdx2P43241 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Cdx2P43241 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Cdx2P43241 Gm13876-201ENSMUST00000118451 261 ntBASIC1.58□□□□□ -2.16
Cdx2P43241 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC1.58□□□□□ -2.16
Cdx2P43241 Gm26181-201ENSMUST00000157687 106 ntBASIC1.58□□□□□ -2.16
Cdx2P43241 Gm5277-201ENSMUST00000164923 556 ntBASIC1.58□□□□□ -2.16
Cdx2P43241 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Cdx2P43241 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC1.58□□□□□ -2.16
Cdx2P43241 Gm24656-201ENSMUST00000177548 132 ntBASIC1.58□□□□□ -2.16
Cdx2P43241 Gm28383-201ENSMUST00000187563 139 ntBASIC1.58□□□□□ -2.16
Cdx2P43241 Gm29262-201ENSMUST00000190084 196 ntBASIC1.58□□□□□ -2.16
Cdx2P43241 Igkv1-108-201ENSMUST00000198926 298 ntBASIC1.58□□□□□ -2.16
Cdx2P43241 Gm46993-201ENSMUST00000220708 259 ntBASIC1.58□□□□□ -2.16
Cdx2P43241 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.58□□□□□ -2.16
Cdx2P43241 Gm26206-201ENSMUST00000082908 110 ntBASIC1.58□□□□□ -2.16
Cdx2P43241 Gm23452-201ENSMUST00000083327 107 ntBASIC1.58□□□□□ -2.16
Cdx2P43241 Gm37761-201ENSMUST00000194989 2098 ntBASIC1.58□□□□□ -2.16
Cdx2P43241 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Cdx2P43241 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC1.57□□□□□ -2.16
Cdx2P43241 Gm24049-201ENSMUST00000102409 100 ntBASIC1.57□□□□□ -2.16
Cdx2P43241 Gm14670-201ENSMUST00000117327 337 ntBASIC1.57□□□□□ -2.16
Cdx2P43241 Gm14945-201ENSMUST00000119556 1118 ntBASIC1.57□□□□□ -2.16
Cdx2P43241 Gm15029-201ENSMUST00000119742 199 ntBASIC1.57□□□□□ -2.16
Cdx2P43241 Gm6806-201ENSMUST00000120092 1006 ntBASIC1.57□□□□□ -2.16
Cdx2P43241 Gm12881-201ENSMUST00000121191 203 ntBASIC1.57□□□□□ -2.16
Cdx2P43241 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
Cdx2P43241 Gm25283-201ENSMUST00000157272 77 ntBASIC1.57□□□□□ -2.16
Cdx2P43241 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC1.57□□□□□ -2.16
Cdx2P43241 Gm27511-201ENSMUST00000183502 127 ntBASIC1.57□□□□□ -2.16
Cdx2P43241 Mir8106-201ENSMUST00000184520 139 ntBASIC1.57□□□□□ -2.16
Cdx2P43241 Gm28163-201ENSMUST00000187099 325 ntBASIC1.57□□□□□ -2.16
Cdx2P43241 Gm28196-201ENSMUST00000187719 640 ntBASIC1.57□□□□□ -2.16
Cdx2P43241 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC1.57□□□□□ -2.16
Cdx2P43241 Gm8041-201ENSMUST00000199755 616 ntBASIC1.57□□□□□ -2.16
Cdx2P43241 Gm18598-201ENSMUST00000207724 597 ntBASIC1.57□□□□□ -2.16
Cdx2P43241 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC1.57□□□□□ -2.16
Cdx2P43241 AC163646.2-201ENSMUST00000227962 141 ntBASIC1.57□□□□□ -2.16
Cdx2P43241 AC133654.1-201ENSMUST00000228411 672 ntBASIC1.57□□□□□ -2.16
Cdx2P43241 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Cdx2P43241 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Cdx2P43241 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Cdx2P43241 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Cdx2P43241 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Cdx2P43241 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Cdx2P43241 Gm14918-201ENSMUST00000118153 268 ntBASIC1.56□□□□□ -2.16
Cdx2P43241 Gm7429-201ENSMUST00000118664 348 ntBASIC1.56□□□□□ -2.16
Cdx2P43241 Gm12889-201ENSMUST00000118684 241 ntBASIC1.56□□□□□ -2.16
Cdx2P43241 Gm8217-201ENSMUST00000119136 465 ntBASIC1.56□□□□□ -2.16
Cdx2P43241 Gm15223-201ENSMUST00000120989 826 ntBASIC1.56□□□□□ -2.16
Cdx2P43241 Gm11384-201ENSMUST00000121376 303 ntBASIC1.56□□□□□ -2.16
Cdx2P43241 Gm14840-201ENSMUST00000122135 594 ntBASIC1.56□□□□□ -2.16
Cdx2P43241 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.56□□□□□ -2.16
Cdx2P43241 Gm26275-201ENSMUST00000157101 268 ntBASIC1.56□□□□□ -2.16
Cdx2P43241 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC1.56□□□□□ -2.16
Cdx2P43241 Mir6379-201ENSMUST00000183392 115 ntBASIC1.56□□□□□ -2.16
Cdx2P43241 Mir7665-201ENSMUST00000184907 63 ntBASIC1.56□□□□□ -2.16
Cdx2P43241 Gm28755-201ENSMUST00000185773 199 ntBASIC1.56□□□□□ -2.16
Cdx2P43241 Gm20058-201ENSMUST00000186939 284 ntBASIC1.56□□□□□ -2.16
Cdx2P43241 Gm42976-201ENSMUST00000200313 222 ntBASIC1.56□□□□□ -2.16
Cdx2P43241 Gm44011-201ENSMUST00000203336 394 ntBASIC1.56□□□□□ -2.16
Cdx2P43241 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC1.56□□□□□ -2.16
Cdx2P43241 Gm45754-201ENSMUST00000212380 279 ntBASIC1.56□□□□□ -2.16
Cdx2P43241 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC1.56□□□□□ -2.16
Cdx2P43241 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.56□□□□□ -2.16
Cdx2P43241 AC161758.1-201ENSMUST00000226123 310 ntBASIC1.56□□□□□ -2.16
Cdx2P43241 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Cdx2P43241 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Cdx2P43241 Gm26143-201ENSMUST00000104480 108 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 107.4 ms