Protein–RNA interactions for Protein: P28700

Rxra, Retinoic acid receptor RXR-alpha, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxraP28700 Gm22833-201ENSMUST00000158292 132 ntBASIC3.2□□□□□ -1.9
RxraP28700 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
RxraP28700 Gm21737-201ENSMUST00000178112 664 ntBASIC3.2□□□□□ -1.9
RxraP28700 Gm21815-201ENSMUST00000178213 664 ntBASIC3.2□□□□□ -1.9
RxraP28700 Gm20874-201ENSMUST00000178356 663 ntBASIC3.2□□□□□ -1.9
RxraP28700 Gm22131-201ENSMUST00000178415 94 ntBASIC3.2□□□□□ -1.9
RxraP28700 Gm20901-201ENSMUST00000180177 664 ntBASIC3.2□□□□□ -1.9
RxraP28700 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RxraP28700 Gm28000-201ENSMUST00000184380 85 ntBASIC3.2□□□□□ -1.9
RxraP28700 Gm29352-201ENSMUST00000188054 544 ntBASIC3.2□□□□□ -1.9
RxraP28700 Gm21647-201ENSMUST00000189755 664 ntBASIC3.2□□□□□ -1.9
RxraP28700 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC3.2□□□□□ -1.9
RxraP28700 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC3.2□□□□□ -1.9
RxraP28700 Gm37104-201ENSMUST00000193278 196 ntBASIC3.2□□□□□ -1.9
RxraP28700 Gm37417-201ENSMUST00000195257 454 ntBASIC3.2□□□□□ -1.9
RxraP28700 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RxraP28700 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.2□□□□□ -1.9
RxraP28700 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC3.2□□□□□ -1.9
RxraP28700 AC161426.1-201ENSMUST00000214137 286 ntBASIC3.2□□□□□ -1.9
RxraP28700 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.2□□□□□ -1.9
RxraP28700 AC154506.1-201ENSMUST00000225178 621 ntBASIC3.2□□□□□ -1.9
RxraP28700 AC122393.3-201ENSMUST00000226343 1059 ntBASIC3.2□□□□□ -1.9
RxraP28700 AC118639.1-204ENSMUST00000226401 694 ntBASIC3.2□□□□□ -1.9
RxraP28700 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
RxraP28700 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
RxraP28700 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
RxraP28700 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
RxraP28700 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
RxraP28700 Gm24119-201ENSMUST00000103979 246 ntBASIC3.19□□□□□ -1.9
RxraP28700 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RxraP28700 Gm15282-201ENSMUST00000117707 300 ntBASIC3.19□□□□□ -1.9
RxraP28700 Gm14987-201ENSMUST00000117820 676 ntBASIC3.19□□□□□ -1.9
RxraP28700 Gm12693-201ENSMUST00000121965 483 ntBASIC3.19□□□□□ -1.9
RxraP28700 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.19□□□□□ -1.9
RxraP28700 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RxraP28700 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RxraP28700 Gm17062-201ENSMUST00000166987 461 ntBASIC3.19□□□□□ -1.9
RxraP28700 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RxraP28700 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC3.19□□□□□ -1.9
RxraP28700 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC3.19□□□□□ -1.9
RxraP28700 Gm43529-201ENSMUST00000199178 412 ntBASIC3.19□□□□□ -1.9
RxraP28700 Gm43039-201ENSMUST00000202883 963 ntBASIC3.19□□□□□ -1.9
RxraP28700 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC3.19□□□□□ -1.9
RxraP28700 Gm44084-201ENSMUST00000203947 409 ntBASIC3.19□□□□□ -1.9
RxraP28700 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
RxraP28700 CT572985.2-201ENSMUST00000220496 211 ntBASIC3.19□□□□□ -1.9
RxraP28700 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RxraP28700 Gm23627-201ENSMUST00000082459 107 ntBASIC3.19□□□□□ -1.9
RxraP28700 Gm22502-201ENSMUST00000082488 107 ntBASIC3.19□□□□□ -1.9
RxraP28700 Gm22977-201ENSMUST00000082615 107 ntBASIC3.19□□□□□ -1.9
RxraP28700 Gm24149-201ENSMUST00000082757 107 ntBASIC3.19□□□□□ -1.9
RxraP28700 Gm24533-201ENSMUST00000083138 196 ntBASIC3.19□□□□□ -1.9
RxraP28700 AF357428-201ENSMUST00000083815 69 ntBASIC3.19□□□□□ -1.9
RxraP28700 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
RxraP28700 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RxraP28700 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
RxraP28700 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
RxraP28700 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
RxraP28700 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
RxraP28700 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
RxraP28700 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
RxraP28700 Gm26396-201ENSMUST00000104093 132 ntBASIC3.18□□□□□ -1.9
RxraP28700 Gm22656-201ENSMUST00000104199 171 ntBASIC3.18□□□□□ -1.9
RxraP28700 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.18□□□□□ -1.9
RxraP28700 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC3.18□□□□□ -1.9
RxraP28700 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC3.18□□□□□ -1.9
RxraP28700 Gm17148-201ENSMUST00000164702 249 ntBASIC3.18□□□□□ -1.9
RxraP28700 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC3.18□□□□□ -1.9
RxraP28700 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.18□□□□□ -1.9
RxraP28700 Gm44825-201ENSMUST00000207557 150 ntBASIC3.18□□□□□ -1.9
RxraP28700 Gm44598-201ENSMUST00000207566 150 ntBASIC3.18□□□□□ -1.9
RxraP28700 AC164117.2-201ENSMUST00000222090 327 ntBASIC3.18□□□□□ -1.9
RxraP28700 Gm30155-201ENSMUST00000223458 339 ntBASIC3.18□□□□□ -1.9
RxraP28700 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.18□□□□□ -1.9
RxraP28700 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RxraP28700 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RxraP28700 Mir10a-201ENSMUST00000083585 110 ntBASIC3.18□□□□□ -1.9
RxraP28700 Gm26166-201ENSMUST00000083788 107 ntBASIC3.18□□□□□ -1.9
RxraP28700 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.18□□□□□ -1.9
RxraP28700 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC3.17□□□□□ -1.9
RxraP28700 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.17□□□□□ -1.9
RxraP28700 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
RxraP28700 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
RxraP28700 Gm25764-201ENSMUST00000104092 134 ntBASIC3.17□□□□□ -1.9
RxraP28700 Gm24982-201ENSMUST00000104456 132 ntBASIC3.17□□□□□ -1.9
RxraP28700 Gm14825-201ENSMUST00000113538 701 ntBASIC3.17□□□□□ -1.9
RxraP28700 Mir1198-201ENSMUST00000116995 121 ntBASIC3.17□□□□□ -1.9
RxraP28700 Gm13761-201ENSMUST00000117238 807 ntBASIC3.17□□□□□ -1.9
RxraP28700 Gm13475-201ENSMUST00000119290 234 ntBASIC3.17□□□□□ -1.9
RxraP28700 Gm13339-201ENSMUST00000120651 510 ntBASIC3.17□□□□□ -1.9
RxraP28700 Gm6265-201ENSMUST00000149263 231 ntBASIC3.17□□□□□ -1.9
RxraP28700 Gm24914-201ENSMUST00000157285 313 ntBASIC3.17□□□□□ -1.9
RxraP28700 Gm24409-201ENSMUST00000157881 152 ntBASIC3.17□□□□□ -1.9
RxraP28700 Gm26159-201ENSMUST00000158968 104 ntBASIC3.17□□□□□ -1.9
RxraP28700 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
RxraP28700 Mir8096-201ENSMUST00000184526 127 ntBASIC3.17□□□□□ -1.9
RxraP28700 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC3.17□□□□□ -1.9
RxraP28700 Gm19202-201ENSMUST00000198096 808 ntBASIC3.17□□□□□ -1.9
RxraP28700 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC3.17□□□□□ -1.9
RxraP28700 Gm43284-201ENSMUST00000200103 253 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms