Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Snord82-201ENSMUST00000082889 70 ntBASIC4.44□□□□□ -1.7
RaraP11416 Gm26314-201ENSMUST00000083891 107 ntBASIC4.44□□□□□ -1.7
RaraP11416 AC153964.1-201ENSMUST00000219677 3142 ntBASIC4.44□□□□□ -1.7
RaraP11416 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
RaraP11416 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
RaraP11416 Gm37006-201ENSMUST00000195253 2674 ntBASIC4.43□□□□□ -1.7
RaraP11416 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
RaraP11416 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC4.43□□□□□ -1.7
RaraP11416 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
RaraP11416 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC4.43□□□□□ -1.7
RaraP11416 Gm12328-201ENSMUST00000118611 197 ntBASIC4.43□□□□□ -1.7
RaraP11416 Gm26026-201ENSMUST00000122726 123 ntBASIC4.43□□□□□ -1.7
RaraP11416 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC4.43□□□□□ -1.7
RaraP11416 Gm24997-201ENSMUST00000157910 105 ntBASIC4.43□□□□□ -1.7
RaraP11416 Nron-204ENSMUST00000158971 370 ntBASIC4.43□□□□□ -1.7
RaraP11416 Gm25071-201ENSMUST00000175232 70 ntBASIC4.43□□□□□ -1.7
RaraP11416 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC4.43□□□□□ -1.7
RaraP11416 Mir6537-201ENSMUST00000184150 110 ntBASIC4.43□□□□□ -1.7
RaraP11416 Gm37417-201ENSMUST00000195257 454 ntBASIC4.43□□□□□ -1.7
RaraP11416 Gm44922-201ENSMUST00000206690 90 ntBASIC4.43□□□□□ -1.7
RaraP11416 Gm45031-201ENSMUST00000206800 288 ntBASIC4.43□□□□□ -1.7
RaraP11416 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC4.43□□□□□ -1.7
RaraP11416 Gm6796-201ENSMUST00000211919 243 ntBASIC4.43□□□□□ -1.7
RaraP11416 AC166830.2-201ENSMUST00000225821 196 ntBASIC4.43□□□□□ -1.7
RaraP11416 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.43□□□□□ -1.7
RaraP11416 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RaraP11416 Mir133a-2-201ENSMUST00000083526 104 ntBASIC4.43□□□□□ -1.7
RaraP11416 Gm25257-201ENSMUST00000083907 110 ntBASIC4.43□□□□□ -1.7
RaraP11416 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
RaraP11416 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
RaraP11416 AC124561.2-201ENSMUST00000226657 1973 ntBASIC4.43□□□□□ -1.7
RaraP11416 Gm37498-201ENSMUST00000193524 4002 ntBASIC4.43□□□□□ -1.7
RaraP11416 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RaraP11416 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.43□□□□□ -1.7
RaraP11416 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
RaraP11416 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
RaraP11416 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.42□□□□□ -1.7
RaraP11416 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
RaraP11416 Gm42528-201ENSMUST00000200697 3418 ntBASIC4.42□□□□□ -1.7
RaraP11416 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
RaraP11416 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
RaraP11416 AC153150.1-201ENSMUST00000226065 3782 ntBASIC4.42□□□□□ -1.7
RaraP11416 Gm15896-201ENSMUST00000118045 440 ntBASIC4.42□□□□□ -1.7
RaraP11416 Gm23982-201ENSMUST00000157141 106 ntBASIC4.42□□□□□ -1.7
RaraP11416 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RaraP11416 Gm20450-201ENSMUST00000173652 147 ntBASIC4.42□□□□□ -1.7
RaraP11416 Gm23571-201ENSMUST00000180073 127 ntBASIC4.42□□□□□ -1.7
RaraP11416 Gm21960-201ENSMUST00000181924 452 ntBASIC4.42□□□□□ -1.7
RaraP11416 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC4.42□□□□□ -1.7
RaraP11416 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RaraP11416 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC4.42□□□□□ -1.7
RaraP11416 Gm7065-201ENSMUST00000222150 474 ntBASIC4.42□□□□□ -1.7
RaraP11416 AC123533.1-201ENSMUST00000227782 446 ntBASIC4.42□□□□□ -1.7
RaraP11416 AC074315.1-201ENSMUST00000228801 214 ntBASIC4.42□□□□□ -1.7
RaraP11416 Gm24410-201ENSMUST00000083433 107 ntBASIC4.42□□□□□ -1.7
RaraP11416 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RaraP11416 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RaraP11416 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
RaraP11416 Gm37879-201ENSMUST00000193112 1995 ntBASIC4.42□□□□□ -1.7
RaraP11416 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RaraP11416 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RaraP11416 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
RaraP11416 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
RaraP11416 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
RaraP11416 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
RaraP11416 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
RaraP11416 Gm22026-201ENSMUST00000122735 281 ntBASIC4.41□□□□□ -1.7
RaraP11416 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RaraP11416 Gm23906-201ENSMUST00000157573 128 ntBASIC4.41□□□□□ -1.7
RaraP11416 Gm24690-201ENSMUST00000157759 97 ntBASIC4.41□□□□□ -1.7
RaraP11416 Gm26028-201ENSMUST00000158660 294 ntBASIC4.41□□□□□ -1.7
RaraP11416 Mir6338-201ENSMUST00000183389 109 ntBASIC4.41□□□□□ -1.7
RaraP11416 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.41□□□□□ -1.7
RaraP11416 Gm36189-201ENSMUST00000204113 523 ntBASIC4.41□□□□□ -1.7
RaraP11416 AC160134.1-201ENSMUST00000213450 551 ntBASIC4.41□□□□□ -1.7
RaraP11416 AL627387.1-201ENSMUST00000226063 250 ntBASIC4.41□□□□□ -1.7
RaraP11416 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC4.41□□□□□ -1.7
RaraP11416 Gm25812-201ENSMUST00000082751 103 ntBASIC4.41□□□□□ -1.7
RaraP11416 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
RaraP11416 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
RaraP11416 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
RaraP11416 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.41□□□□□ -1.7
RaraP11416 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
RaraP11416 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RaraP11416 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
RaraP11416 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
RaraP11416 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4.4□□□□□ -1.7
RaraP11416 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
RaraP11416 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
RaraP11416 Gm23472-201ENSMUST00000101806 191 ntBASIC4.4□□□□□ -1.71
RaraP11416 Gm24132-201ENSMUST00000104745 91 ntBASIC4.4□□□□□ -1.71
RaraP11416 Gm14803-201ENSMUST00000117163 361 ntBASIC4.4□□□□□ -1.71
RaraP11416 Gm12173-201ENSMUST00000117622 273 ntBASIC4.4□□□□□ -1.71
RaraP11416 Gm12902-201ENSMUST00000118389 322 ntBASIC4.4□□□□□ -1.71
RaraP11416 Gm12466-201ENSMUST00000121199 620 ntBASIC4.4□□□□□ -1.71
RaraP11416 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC4.4□□□□□ -1.71
RaraP11416 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC4.4□□□□□ -1.71
RaraP11416 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC4.4□□□□□ -1.71
RaraP11416 Gm16354-201ENSMUST00000155376 150 ntBASIC4.4□□□□□ -1.71
RaraP11416 Gm22378-201ENSMUST00000157481 111 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 100 ms