Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm37771-201ENSMUST00000193121 265 ntBASIC2.65□□□□□ -1.99
Lire1P11260 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC2.65□□□□□ -1.99
Lire1P11260 Gm44395-201ENSMUST00000197056 153 ntBASIC2.65□□□□□ -1.99
Lire1P11260 Igkv1-115-201ENSMUST00000198714 302 ntBASIC2.65□□□□□ -1.99
Lire1P11260 Gm43708-201ENSMUST00000198857 961 ntBASIC2.65□□□□□ -1.99
Lire1P11260 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
Lire1P11260 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC2.65□□□□□ -1.99
Lire1P11260 AC138401.1-201ENSMUST00000221533 116 ntBASIC2.65□□□□□ -1.99
Lire1P11260 Gm9318-201ENSMUST00000222444 438 ntBASIC2.65□□□□□ -1.99
Lire1P11260 AC135292.1-201ENSMUST00000227665 204 ntBASIC2.65□□□□□ -1.99
Lire1P11260 Gm24707-201ENSMUST00000082812 107 ntBASIC2.65□□□□□ -1.99
Lire1P11260 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
Lire1P11260 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Lire1P11260 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Lire1P11260 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Lire1P11260 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Lire1P11260 Gm15714-201ENSMUST00000117168 250 ntBASIC2.64□□□□□ -1.99
Lire1P11260 Gm12765-201ENSMUST00000117273 615 ntBASIC2.64□□□□□ -1.99
Lire1P11260 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.64□□□□□ -1.99
Lire1P11260 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Lire1P11260 Mir3103-201ENSMUST00000175474 67 ntBASIC2.64□□□□□ -1.99
Lire1P11260 Mir6335-201ENSMUST00000184081 98 ntBASIC2.64□□□□□ -1.99
Lire1P11260 Gm1833-201ENSMUST00000191608 682 ntBASIC2.64□□□□□ -1.99
Lire1P11260 Mir7118-201ENSMUST00000197760 61 ntBASIC2.64□□□□□ -1.99
Lire1P11260 Gm44024-201ENSMUST00000203008 476 ntBASIC2.64□□□□□ -1.99
Lire1P11260 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC2.64□□□□□ -1.99
Lire1P11260 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.64□□□□□ -1.99
Lire1P11260 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC2.64□□□□□ -1.99
Lire1P11260 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC2.63□□□□□ -1.99
Lire1P11260 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Lire1P11260 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Lire1P11260 Gm12102-201ENSMUST00000118251 604 ntBASIC2.63□□□□□ -1.99
Lire1P11260 Gm12550-201ENSMUST00000118478 329 ntBASIC2.63□□□□□ -1.99
Lire1P11260 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC2.63□□□□□ -1.99
Lire1P11260 Gm22038-201ENSMUST00000157277 242 ntBASIC2.63□□□□□ -1.99
Lire1P11260 Gm17085-201ENSMUST00000165425 502 ntBASIC2.63□□□□□ -1.99
Lire1P11260 Gm22716-201ENSMUST00000177596 107 ntBASIC2.63□□□□□ -1.99
Lire1P11260 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC2.63□□□□□ -1.99
Lire1P11260 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
Lire1P11260 Gm44060-201ENSMUST00000204440 410 ntBASIC2.63□□□□□ -1.99
Lire1P11260 Gm44526-201ENSMUST00000204664 121 ntBASIC2.63□□□□□ -1.99
Lire1P11260 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC2.63□□□□□ -1.99
Lire1P11260 Gm22810-201ENSMUST00000082741 158 ntBASIC2.63□□□□□ -1.99
Lire1P11260 Gm25402-201ENSMUST00000082966 131 ntBASIC2.63□□□□□ -1.99
Lire1P11260 Mir93-201ENSMUST00000083593 88 ntBASIC2.63□□□□□ -1.99
Lire1P11260 Gm22578-201ENSMUST00000083730 107 ntBASIC2.63□□□□□ -1.99
Lire1P11260 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
Lire1P11260 Gm23911-201ENSMUST00000104596 134 ntBASIC2.62□□□□□ -1.99
Lire1P11260 Gm15896-201ENSMUST00000118045 440 ntBASIC2.62□□□□□ -1.99
Lire1P11260 Gm14748-201ENSMUST00000119819 411 ntBASIC2.62□□□□□ -1.99
Lire1P11260 Gm6568-201ENSMUST00000122274 697 ntBASIC2.62□□□□□ -1.99
Lire1P11260 Gm14333-201ENSMUST00000130484 264 ntBASIC2.62□□□□□ -1.99
Lire1P11260 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC2.62□□□□□ -1.99
Lire1P11260 Gm21827-201ENSMUST00000178247 423 ntBASIC2.62□□□□□ -1.99
Lire1P11260 Gm26928-201ENSMUST00000182674 572 ntBASIC2.62□□□□□ -1.99
Lire1P11260 Mir6376-201ENSMUST00000185149 131 ntBASIC2.62□□□□□ -1.99
Lire1P11260 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC2.62□□□□□ -1.99
Lire1P11260 Gm23370-202ENSMUST00000197008 129 ntBASIC2.62□□□□□ -1.99
Lire1P11260 Gm44157-201ENSMUST00000204720 410 ntBASIC2.62□□□□□ -1.99
Lire1P11260 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Lire1P11260 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Lire1P11260 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Lire1P11260 Mir452-201ENSMUST00000093629 85 ntBASIC2.62□□□□□ -1.99
Lire1P11260 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Lire1P11260 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.62□□□□□ -1.99
Lire1P11260 Mir344c-201ENSMUST00000103919 92 ntBASIC2.61□□□□□ -1.99
Lire1P11260 Gm11285-201ENSMUST00000118443 322 ntBASIC2.61□□□□□ -1.99
Lire1P11260 Gm11849-201ENSMUST00000121293 261 ntBASIC2.61□□□□□ -1.99
Lire1P11260 Gm13356-201ENSMUST00000121678 335 ntBASIC2.61□□□□□ -1.99
Lire1P11260 Gm25784-201ENSMUST00000122524 81 ntBASIC2.61□□□□□ -1.99
Lire1P11260 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.61□□□□□ -1.99
Lire1P11260 Gm23956-201ENSMUST00000157211 119 ntBASIC2.61□□□□□ -1.99
Lire1P11260 Ear-ps8-201ENSMUST00000161935 354 ntBASIC2.61□□□□□ -1.99
Lire1P11260 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC2.61□□□□□ -1.99
Lire1P11260 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Lire1P11260 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
Lire1P11260 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC2.61□□□□□ -1.99
Lire1P11260 Gm43114-201ENSMUST00000198298 343 ntBASIC2.61□□□□□ -1.99
Lire1P11260 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.61□□□□□ -1.99
Lire1P11260 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC2.61□□□□□ -1.99
Lire1P11260 Gm45382-201ENSMUST00000210607 151 ntBASIC2.61□□□□□ -1.99
Lire1P11260 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Lire1P11260 Mir184-201ENSMUST00000083662 69 ntBASIC2.61□□□□□ -1.99
Lire1P11260 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
Lire1P11260 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Lire1P11260 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Lire1P11260 Gm12636-201ENSMUST00000117395 624 ntBASIC2.6□□□□□ -1.99
Lire1P11260 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC2.6□□□□□ -1.99
Lire1P11260 Gm13913-201ENSMUST00000121126 260 ntBASIC2.6□□□□□ -1.99
Lire1P11260 Gm14821-201ENSMUST00000121975 435 ntBASIC2.6□□□□□ -1.99
Lire1P11260 Gm15281-201ENSMUST00000125181 351 ntBASIC2.6□□□□□ -1.99
Lire1P11260 Gm15878-201ENSMUST00000127561 306 ntBASIC2.6□□□□□ -1.99
Lire1P11260 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Lire1P11260 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC2.6□□□□□ -1.99
Lire1P11260 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC2.6□□□□□ -1.99
Lire1P11260 Gm6615-201ENSMUST00000199426 631 ntBASIC2.6□□□□□ -1.99
Lire1P11260 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.6□□□□□ -1.99
Lire1P11260 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC2.6□□□□□ -1.99
Lire1P11260 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Lire1P11260 Snord14d-201ENSMUST00000083424 86 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms