Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm12646-201ENSMUST00000119144 238 ntBASIC3.2□□□□□ -1.9
Col3a1P08121 Gm13475-201ENSMUST00000119290 234 ntBASIC3.2□□□□□ -1.9
Col3a1P08121 Gm16100-201ENSMUST00000120489 231 ntBASIC3.2□□□□□ -1.9
Col3a1P08121 Gm14761-201ENSMUST00000121363 262 ntBASIC3.2□□□□□ -1.9
Col3a1P08121 Gm25784-201ENSMUST00000122524 81 ntBASIC3.2□□□□□ -1.9
Col3a1P08121 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC3.2□□□□□ -1.9
Col3a1P08121 Gm2020-201ENSMUST00000145242 579 ntBASIC3.2□□□□□ -1.9
Col3a1P08121 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC3.2□□□□□ -1.9
Col3a1P08121 Gm24075-201ENSMUST00000158175 72 ntBASIC3.2□□□□□ -1.9
Col3a1P08121 Gm17538-201ENSMUST00000168236 327 ntBASIC3.2□□□□□ -1.9
Col3a1P08121 Gm22911-201ENSMUST00000177920 107 ntBASIC3.2□□□□□ -1.9
Col3a1P08121 Mir6418-201ENSMUST00000185075 115 ntBASIC3.2□□□□□ -1.9
Col3a1P08121 Npn2-202ENSMUST00000189275 235 ntBASIC3.2□□□□□ -1.9
Col3a1P08121 Ighv12-1-201ENSMUST00000195542 329 ntBASIC3.2□□□□□ -1.9
Col3a1P08121 Mir3970-201ENSMUST00000199287 90 ntBASIC3.2□□□□□ -1.9
Col3a1P08121 Gm44655-201ENSMUST00000207768 423 ntBASIC3.2□□□□□ -1.9
Col3a1P08121 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC3.2□□□□□ -1.9
Col3a1P08121 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
Col3a1P08121 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC3.2□□□□□ -1.9
Col3a1P08121 AC154270.1-201ENSMUST00000227226 426 ntBASIC3.2□□□□□ -1.9
Col3a1P08121 Gm23627-201ENSMUST00000082459 107 ntBASIC3.2□□□□□ -1.9
Col3a1P08121 Gm22502-201ENSMUST00000082488 107 ntBASIC3.2□□□□□ -1.9
Col3a1P08121 Gm24149-201ENSMUST00000082757 107 ntBASIC3.2□□□□□ -1.9
Col3a1P08121 AC121844.2-201ENSMUST00000219067 2066 ntBASIC3.2□□□□□ -1.9
Col3a1P08121 Gm9218-201ENSMUST00000121068 2694 ntBASIC3.2□□□□□ -1.9
Col3a1P08121 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Col3a1P08121 Gm43718-201ENSMUST00000197524 1857 ntBASIC3.19□□□□□ -1.9
Col3a1P08121 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Col3a1P08121 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC3.19□□□□□ -1.9
Col3a1P08121 Gm7429-201ENSMUST00000118664 348 ntBASIC3.19□□□□□ -1.9
Col3a1P08121 Gm14364-201ENSMUST00000129209 267 ntBASIC3.19□□□□□ -1.9
Col3a1P08121 Gm22646-201ENSMUST00000175130 115 ntBASIC3.19□□□□□ -1.9
Col3a1P08121 Gm7258-201ENSMUST00000179317 300 ntBASIC3.19□□□□□ -1.9
Col3a1P08121 Gm21726-201ENSMUST00000179654 392 ntBASIC3.19□□□□□ -1.9
Col3a1P08121 Gm29229-201ENSMUST00000188874 323 ntBASIC3.19□□□□□ -1.9
Col3a1P08121 Gm36984-201ENSMUST00000192770 235 ntBASIC3.19□□□□□ -1.9
Col3a1P08121 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.19□□□□□ -1.9
Col3a1P08121 Igkv4-60-201ENSMUST00000200639 358 ntBASIC3.19□□□□□ -1.9
Col3a1P08121 Gm44125-201ENSMUST00000203068 448 ntBASIC3.19□□□□□ -1.9
Col3a1P08121 AC153141.1-201ENSMUST00000218636 501 ntBASIC3.19□□□□□ -1.9
Col3a1P08121 AC161572.1-201ENSMUST00000227486 640 ntBASIC3.19□□□□□ -1.9
Col3a1P08121 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Col3a1P08121 Gm22622-201ENSMUST00000082870 129 ntBASIC3.19□□□□□ -1.9
Col3a1P08121 Gm26206-201ENSMUST00000082908 110 ntBASIC3.19□□□□□ -1.9
Col3a1P08121 Gm24042-201ENSMUST00000083114 103 ntBASIC3.19□□□□□ -1.9
Col3a1P08121 Gm23733-201ENSMUST00000083750 106 ntBASIC3.19□□□□□ -1.9
Col3a1P08121 Gm24698-201ENSMUST00000083883 130 ntBASIC3.19□□□□□ -1.9
Col3a1P08121 Mir127-201ENSMUST00000093568 70 ntBASIC3.19□□□□□ -1.9
Col3a1P08121 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Col3a1P08121 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Col3a1P08121 Gm45483-201ENSMUST00000209845 1682 ntBASIC3.18□□□□□ -1.9
Col3a1P08121 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Col3a1P08121 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
Col3a1P08121 Mir294-201ENSMUST00000104710 84 ntBASIC3.18□□□□□ -1.9
Col3a1P08121 Gm14163-201ENSMUST00000117342 217 ntBASIC3.18□□□□□ -1.9
Col3a1P08121 Gm16431-201ENSMUST00000117454 431 ntBASIC3.18□□□□□ -1.9
Col3a1P08121 Gm13228-201ENSMUST00000118937 634 ntBASIC3.18□□□□□ -1.9
Col3a1P08121 Gm11794-201ENSMUST00000119446 237 ntBASIC3.18□□□□□ -1.9
Col3a1P08121 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC3.18□□□□□ -1.9
Col3a1P08121 Gm25642-201ENSMUST00000175137 66 ntBASIC3.18□□□□□ -1.9
Col3a1P08121 Gm21991-201ENSMUST00000180006 508 ntBASIC3.18□□□□□ -1.9
Col3a1P08121 Gm27999-201ENSMUST00000183539 193 ntBASIC3.18□□□□□ -1.9
Col3a1P08121 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.18□□□□□ -1.9
Col3a1P08121 Gm7858-201ENSMUST00000190177 622 ntBASIC3.18□□□□□ -1.9
Col3a1P08121 Gm29524-201ENSMUST00000190819 699 ntBASIC3.18□□□□□ -1.9
Col3a1P08121 Gm43415-201ENSMUST00000201934 750 ntBASIC3.18□□□□□ -1.9
Col3a1P08121 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC3.18□□□□□ -1.9
Col3a1P08121 Gm45048-201ENSMUST00000207058 429 ntBASIC3.18□□□□□ -1.9
Col3a1P08121 Gm45590-201ENSMUST00000209715 262 ntBASIC3.18□□□□□ -1.9
Col3a1P08121 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC3.18□□□□□ -1.9
Col3a1P08121 AC166341.3-201ENSMUST00000221861 114 ntBASIC3.18□□□□□ -1.9
Col3a1P08121 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Col3a1P08121 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Col3a1P08121 Gm22572-201ENSMUST00000082985 105 ntBASIC3.18□□□□□ -1.9
Col3a1P08121 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Col3a1P08121 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.18□□□□□ -1.9
Col3a1P08121 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC3.18□□□□□ -1.9
Col3a1P08121 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.18□□□□□ -1.9
Col3a1P08121 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
Col3a1P08121 Mir450-2-201ENSMUST00000102444 69 ntBASIC3.17□□□□□ -1.9
Col3a1P08121 Gm23011-201ENSMUST00000104148 132 ntBASIC3.17□□□□□ -1.9
Col3a1P08121 Gm13085-201ENSMUST00000118356 171 ntBASIC3.17□□□□□ -1.9
Col3a1P08121 Gm8260-201ENSMUST00000119230 353 ntBASIC3.17□□□□□ -1.9
Col3a1P08121 Gm14269-201ENSMUST00000120455 306 ntBASIC3.17□□□□□ -1.9
Col3a1P08121 Gm14736-201ENSMUST00000121470 336 ntBASIC3.17□□□□□ -1.9
Col3a1P08121 Gm25325-201ENSMUST00000122559 86 ntBASIC3.17□□□□□ -1.9
Col3a1P08121 Gm25982-201ENSMUST00000157920 101 ntBASIC3.17□□□□□ -1.9
Col3a1P08121 Gm24736-201ENSMUST00000158862 130 ntBASIC3.17□□□□□ -1.9
Col3a1P08121 Gm22851-201ENSMUST00000178741 94 ntBASIC3.17□□□□□ -1.9
Col3a1P08121 Gm27676-201ENSMUST00000183669 61 ntBASIC3.17□□□□□ -1.9
Col3a1P08121 Gm27786-201ENSMUST00000184337 70 ntBASIC3.17□□□□□ -1.9
Col3a1P08121 Gm28257-201ENSMUST00000185244 463 ntBASIC3.17□□□□□ -1.9
Col3a1P08121 Gm28666-201ENSMUST00000186649 274 ntBASIC3.17□□□□□ -1.9
Col3a1P08121 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC3.17□□□□□ -1.9
Col3a1P08121 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC3.17□□□□□ -1.9
Col3a1P08121 Gm34091-201ENSMUST00000200875 604 ntBASIC3.17□□□□□ -1.9
Col3a1P08121 Gm45879-201ENSMUST00000212521 392 ntBASIC3.17□□□□□ -1.9
Col3a1P08121 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Col3a1P08121 Gm23406-201ENSMUST00000082537 122 ntBASIC3.17□□□□□ -1.9
Col3a1P08121 Gm23503-201ENSMUST00000083903 107 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 98.7 ms