Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm26345-201ENSMUST00000157534 120 ntBASIC2.2□□□□□ -2.06
TnfP06804 Gm8292-201ENSMUST00000162574 396 ntBASIC2.2□□□□□ -2.06
TnfP06804 Gm24137-201ENSMUST00000180055 79 ntBASIC2.2□□□□□ -2.06
TnfP06804 Gm22391-201ENSMUST00000180356 79 ntBASIC2.2□□□□□ -2.06
TnfP06804 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC2.2□□□□□ -2.06
TnfP06804 Igkv13-64-201ENSMUST00000198143 343 ntBASIC2.2□□□□□ -2.06
TnfP06804 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC2.2□□□□□ -2.06
TnfP06804 Gm18000-201ENSMUST00000212153 800 ntBASIC2.2□□□□□ -2.06
TnfP06804 AC113305.1-201ENSMUST00000214664 724 ntBASIC2.2□□□□□ -2.06
TnfP06804 AC183092.2-201ENSMUST00000225542 1153 ntBASIC2.2□□□□□ -2.06
TnfP06804 AC117588.2-201ENSMUST00000228340 311 ntBASIC2.2□□□□□ -2.06
TnfP06804 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
TnfP06804 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
TnfP06804 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
TnfP06804 AC115891.1-201ENSMUST00000215798 1755 ntBASIC2.2□□□□□ -2.06
TnfP06804 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.2□□□□□ -2.06
TnfP06804 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.2□□□□□ -2.06
TnfP06804 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
TnfP06804 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
TnfP06804 Gm22270-201ENSMUST00000104034 132 ntBASIC2.19□□□□□ -2.06
TnfP06804 Gm15846-201ENSMUST00000116022 320 ntBASIC2.19□□□□□ -2.06
TnfP06804 Gm13728-201ENSMUST00000117471 400 ntBASIC2.19□□□□□ -2.06
TnfP06804 Gm14292-201ENSMUST00000118761 456 ntBASIC2.19□□□□□ -2.06
TnfP06804 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.19□□□□□ -2.06
TnfP06804 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
TnfP06804 Gm2830-201ENSMUST00000140330 385 ntBASIC2.19□□□□□ -2.06
TnfP06804 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
TnfP06804 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC2.19□□□□□ -2.06
TnfP06804 Gm25220-201ENSMUST00000157546 95 ntBASIC2.19□□□□□ -2.06
TnfP06804 Gm22011-201ENSMUST00000158790 123 ntBASIC2.19□□□□□ -2.06
TnfP06804 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
TnfP06804 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
TnfP06804 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
TnfP06804 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
TnfP06804 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
TnfP06804 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
TnfP06804 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
TnfP06804 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
TnfP06804 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.19□□□□□ -2.06
TnfP06804 Mir6382-201ENSMUST00000184055 110 ntBASIC2.19□□□□□ -2.06
TnfP06804 Gm20915-201ENSMUST00000191575 663 ntBASIC2.19□□□□□ -2.06
TnfP06804 Gm36966-201ENSMUST00000192217 413 ntBASIC2.19□□□□□ -2.06
TnfP06804 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC2.19□□□□□ -2.06
TnfP06804 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC2.19□□□□□ -2.06
TnfP06804 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
TnfP06804 AC192334.2-201ENSMUST00000223087 1091 ntBASIC2.19□□□□□ -2.06
TnfP06804 Gm22974-201ENSMUST00000083301 103 ntBASIC2.19□□□□□ -2.06
TnfP06804 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.19□□□□□ -2.06
TnfP06804 Mir19a-201ENSMUST00000083482 82 ntBASIC2.19□□□□□ -2.06
TnfP06804 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.18□□□□□ -2.06
TnfP06804 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC2.18□□□□□ -2.06
TnfP06804 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
TnfP06804 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
TnfP06804 Gm12044-201ENSMUST00000120335 213 ntBASIC2.18□□□□□ -2.06
TnfP06804 Gm8080-201ENSMUST00000122046 1155 ntBASIC2.18□□□□□ -2.06
TnfP06804 Gm22611-201ENSMUST00000158288 150 ntBASIC2.18□□□□□ -2.06
TnfP06804 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC2.18□□□□□ -2.06
TnfP06804 Mir3964-201ENSMUST00000174898 74 ntBASIC2.18□□□□□ -2.06
TnfP06804 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
TnfP06804 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
TnfP06804 Gm27443-201ENSMUST00000184660 98 ntBASIC2.18□□□□□ -2.06
TnfP06804 Gm18691-201ENSMUST00000203593 872 ntBASIC2.18□□□□□ -2.06
TnfP06804 Gm44961-201ENSMUST00000207450 196 ntBASIC2.18□□□□□ -2.06
TnfP06804 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC2.18□□□□□ -2.06
TnfP06804 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC2.18□□□□□ -2.06
TnfP06804 Gm18617-201ENSMUST00000222311 259 ntBASIC2.18□□□□□ -2.06
TnfP06804 AC160962.2-201ENSMUST00000224761 632 ntBASIC2.18□□□□□ -2.06
TnfP06804 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
TnfP06804 Gm23727-201ENSMUST00000083352 164 ntBASIC2.18□□□□□ -2.06
TnfP06804 Gm5670-201ENSMUST00000093546 372 ntBASIC2.18□□□□□ -2.06
TnfP06804 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC2.18□□□□□ -2.06
TnfP06804 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
TnfP06804 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.17□□□□□ -2.06
TnfP06804 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
TnfP06804 Gm23950-201ENSMUST00000104026 129 ntBASIC2.17□□□□□ -2.06
TnfP06804 Gm12106-201ENSMUST00000116006 1200 ntBASIC2.17□□□□□ -2.06
TnfP06804 Gm6444-201ENSMUST00000119611 458 ntBASIC2.17□□□□□ -2.06
TnfP06804 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.17□□□□□ -2.06
TnfP06804 Trav20-201ENSMUST00000142754 347 ntBASIC2.17□□□□□ -2.06
TnfP06804 Gm22803-201ENSMUST00000158049 283 ntBASIC2.17□□□□□ -2.06
TnfP06804 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
TnfP06804 Gm17064-201ENSMUST00000167690 452 ntBASIC2.17□□□□□ -2.06
TnfP06804 Gm17054-201ENSMUST00000169811 259 ntBASIC2.17□□□□□ -2.06
TnfP06804 Spanxn4-201ENSMUST00000172433 424 ntBASIC2.17□□□□□ -2.06
TnfP06804 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC2.17□□□□□ -2.06
TnfP06804 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC2.17□□□□□ -2.06
TnfP06804 Gm4076-201ENSMUST00000179230 965 ntBASIC2.17□□□□□ -2.06
TnfP06804 Mir6406-201ENSMUST00000183592 120 ntBASIC2.17□□□□□ -2.06
TnfP06804 Mir7016-201ENSMUST00000184308 72 ntBASIC2.17□□□□□ -2.06
TnfP06804 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.17□□□□□ -2.06
TnfP06804 Gm20058-201ENSMUST00000186939 284 ntBASIC2.17□□□□□ -2.06
TnfP06804 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC2.17□□□□□ -2.06
TnfP06804 Gm43402-201ENSMUST00000197159 159 ntBASIC2.17□□□□□ -2.06
TnfP06804 Gm45101-201ENSMUST00000208327 232 ntBASIC2.17□□□□□ -2.06
TnfP06804 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC2.17□□□□□ -2.06
TnfP06804 Gm45387-201ENSMUST00000209792 632 ntBASIC2.17□□□□□ -2.06
TnfP06804 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
TnfP06804 AC160031.2-201ENSMUST00000218242 274 ntBASIC2.17□□□□□ -2.06
TnfP06804 AC154271.1-201ENSMUST00000224780 383 ntBASIC2.17□□□□□ -2.06
TnfP06804 Gm22247-201ENSMUST00000082476 131 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 118.1 ms