Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Mir8106-201ENSMUST00000184520 139 ntBASIC1.3□□□□□ -2.2
P04213 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
P04213 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.3□□□□□ -2.2
P04213 Gm20058-201ENSMUST00000186939 284 ntBASIC1.3□□□□□ -2.2
P04213 Gm37946-201ENSMUST00000192064 347 ntBASIC1.3□□□□□ -2.2
P04213 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC1.3□□□□□ -2.2
P04213 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC1.3□□□□□ -2.2
P04213 Gm18598-201ENSMUST00000207724 597 ntBASIC1.3□□□□□ -2.2
P04213 Gm45530-201ENSMUST00000211658 225 ntBASIC1.3□□□□□ -2.2
P04213 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.3□□□□□ -2.2
P04213 Gm26128-201ENSMUST00000083170 110 ntBASIC1.3□□□□□ -2.2
P04213 AC153881.3-201ENSMUST00000218494 1561 ntBASIC1.3□□□□□ -2.2
P04213 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
P04213 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
P04213 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC1.29□□□□□ -2.2
P04213 Gm14128-201ENSMUST00000119514 1011 ntBASIC1.29□□□□□ -2.2
P04213 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC1.29□□□□□ -2.2
P04213 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC1.29□□□□□ -2.2
P04213 Gm23670-201ENSMUST00000157469 119 ntBASIC1.29□□□□□ -2.2
P04213 Gm23137-201ENSMUST00000157559 107 ntBASIC1.29□□□□□ -2.2
P04213 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC1.29□□□□□ -2.2
P04213 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.29□□□□□ -2.2
P04213 Gm24304-201ENSMUST00000177635 107 ntBASIC1.29□□□□□ -2.2
P04213 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC1.29□□□□□ -2.2
P04213 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
P04213 Gm8403-201ENSMUST00000189712 1298 ntBASIC1.29□□□□□ -2.2
P04213 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC1.29□□□□□ -2.2
P04213 Gm7871-201ENSMUST00000195346 618 ntBASIC1.29□□□□□ -2.2
P04213 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC1.29□□□□□ -2.2
P04213 Gm44088-201ENSMUST00000204595 237 ntBASIC1.29□□□□□ -2.2
P04213 Gm34701-202ENSMUST00000204685 360 ntBASIC1.29□□□□□ -2.2
P04213 Gm18268-201ENSMUST00000208445 943 ntBASIC1.29□□□□□ -2.2
P04213 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC1.29□□□□□ -2.2
P04213 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
P04213 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC1.29□□□□□ -2.2
P04213 CT009764.1-201ENSMUST00000222260 483 ntBASIC1.29□□□□□ -2.2
P04213 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.29□□□□□ -2.2
P04213 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
P04213 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
P04213 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
P04213 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
P04213 Gm14882-201ENSMUST00000117216 218 ntBASIC1.28□□□□□ -2.2
P04213 Gm11490-201ENSMUST00000118128 272 ntBASIC1.28□□□□□ -2.2
P04213 Gm15183-201ENSMUST00000118933 348 ntBASIC1.28□□□□□ -2.2
P04213 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC1.28□□□□□ -2.2
P04213 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.28□□□□□ -2.2
P04213 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC1.28□□□□□ -2.2
P04213 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC1.28□□□□□ -2.2
P04213 Gm25961-201ENSMUST00000157174 135 ntBASIC1.28□□□□□ -2.2
P04213 Gm24551-201ENSMUST00000158645 92 ntBASIC1.28□□□□□ -2.2
P04213 Mir5101-201ENSMUST00000175181 83 ntBASIC1.28□□□□□ -2.2
P04213 Mup-ps7-201ENSMUST00000178292 545 ntBASIC1.28□□□□□ -2.2
P04213 Mup-ps8-201ENSMUST00000178663 545 ntBASIC1.28□□□□□ -2.2
P04213 Mup-ps9-201ENSMUST00000178847 545 ntBASIC1.28□□□□□ -2.2
P04213 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
P04213 Mup-ps6-201ENSMUST00000179564 545 ntBASIC1.28□□□□□ -2.2
P04213 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
P04213 Gm43578-201ENSMUST00000201250 459 ntBASIC1.28□□□□□ -2.2
P04213 Gm45438-201ENSMUST00000210242 564 ntBASIC1.28□□□□□ -2.2
P04213 Gm18729-201ENSMUST00000217230 621 ntBASIC1.28□□□□□ -2.2
P04213 Gm46193-201ENSMUST00000219399 364 ntBASIC1.28□□□□□ -2.2
P04213 AC154552.5-201ENSMUST00000222352 207 ntBASIC1.28□□□□□ -2.2
P04213 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
P04213 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
P04213 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC1.28□□□□□ -2.2
P04213 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
P04213 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
P04213 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
P04213 Gm24907-201ENSMUST00000116932 128 ntBASIC1.27□□□□□ -2.21
P04213 Gm13239-201ENSMUST00000119920 637 ntBASIC1.27□□□□□ -2.21
P04213 Gm6806-201ENSMUST00000120092 1006 ntBASIC1.27□□□□□ -2.21
P04213 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC1.27□□□□□ -2.21
P04213 Gm15223-201ENSMUST00000120989 826 ntBASIC1.27□□□□□ -2.21
P04213 Gm12872-201ENSMUST00000121835 320 ntBASIC1.27□□□□□ -2.21
P04213 Gm25637-201ENSMUST00000157529 107 ntBASIC1.27□□□□□ -2.21
P04213 Gm17162-201ENSMUST00000168538 473 ntBASIC1.27□□□□□ -2.21
P04213 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC1.27□□□□□ -2.21
P04213 Gm23933-201ENSMUST00000178405 79 ntBASIC1.27□□□□□ -2.21
P04213 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
P04213 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
P04213 Mir6338-201ENSMUST00000183389 109 ntBASIC1.27□□□□□ -2.21
P04213 Gm27511-201ENSMUST00000183502 127 ntBASIC1.27□□□□□ -2.21
P04213 Gm28755-201ENSMUST00000185773 199 ntBASIC1.27□□□□□ -2.21
P04213 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC1.27□□□□□ -2.21
P04213 Gm28151-201ENSMUST00000189404 951 ntBASIC1.27□□□□□ -2.21
P04213 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
P04213 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC1.27□□□□□ -2.21
P04213 Gm43723-201ENSMUST00000196886 189 ntBASIC1.27□□□□□ -2.21
P04213 Gm8041-201ENSMUST00000199755 616 ntBASIC1.27□□□□□ -2.21
P04213 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC1.27□□□□□ -2.21
P04213 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
P04213 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
P04213 AL929285.1-201ENSMUST00000215522 229 ntBASIC1.27□□□□□ -2.21
P04213 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC1.27□□□□□ -2.21
P04213 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC1.27□□□□□ -2.21
P04213 n-R5s79-201ENSMUST00000083071 120 ntBASIC1.27□□□□□ -2.21
P04213 Mir211-201ENSMUST00000083651 106 ntBASIC1.27□□□□□ -2.21
P04213 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
P04213 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
P04213 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 92.1 ms