Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Gm15223-201ENSMUST00000120989 826 ntBASIC3.09□□□□□ -1.91
Cbx4O55187 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.09□□□□□ -1.91
Cbx4O55187 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC3.09□□□□□ -1.91
Cbx4O55187 Gm24577-201ENSMUST00000158580 63 ntBASIC3.09□□□□□ -1.91
Cbx4O55187 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC3.09□□□□□ -1.91
Cbx4O55187 Gm23053-201ENSMUST00000175136 96 ntBASIC3.09□□□□□ -1.91
Cbx4O55187 Mir5099-201ENSMUST00000175257 74 ntBASIC3.09□□□□□ -1.91
Cbx4O55187 Gm43115-201ENSMUST00000196244 160 ntBASIC3.09□□□□□ -1.91
Cbx4O55187 Gm43669-201ENSMUST00000198229 436 ntBASIC3.09□□□□□ -1.91
Cbx4O55187 Gm44468-201ENSMUST00000199516 105 ntBASIC3.09□□□□□ -1.91
Cbx4O55187 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Cbx4O55187 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC3.09□□□□□ -1.91
Cbx4O55187 Gm44825-201ENSMUST00000207557 150 ntBASIC3.09□□□□□ -1.91
Cbx4O55187 Gm44598-201ENSMUST00000207566 150 ntBASIC3.09□□□□□ -1.91
Cbx4O55187 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC3.09□□□□□ -1.91
Cbx4O55187 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC3.09□□□□□ -1.91
Cbx4O55187 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Cbx4O55187 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Cbx4O55187 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.91
Cbx4O55187 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
Cbx4O55187 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
Cbx4O55187 Gm19428-201ENSMUST00000220512 1995 ntBASIC3.09□□□□□ -1.92
Cbx4O55187 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Cbx4O55187 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Cbx4O55187 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Cbx4O55187 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.08□□□□□ -1.92
Cbx4O55187 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Cbx4O55187 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Cbx4O55187 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
Cbx4O55187 Mir687-201ENSMUST00000102166 89 ntBASIC3.08□□□□□ -1.92
Cbx4O55187 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Cbx4O55187 Gm24376-201ENSMUST00000104399 127 ntBASIC3.08□□□□□ -1.92
Cbx4O55187 Gm11456-201ENSMUST00000121070 256 ntBASIC3.08□□□□□ -1.92
Cbx4O55187 Gm14578-201ENSMUST00000122166 391 ntBASIC3.08□□□□□ -1.92
Cbx4O55187 Gm24499-201ENSMUST00000158446 104 ntBASIC3.08□□□□□ -1.92
Cbx4O55187 Gm25902-201ENSMUST00000158493 318 ntBASIC3.08□□□□□ -1.92
Cbx4O55187 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.08□□□□□ -1.92
Cbx4O55187 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC3.08□□□□□ -1.92
Cbx4O55187 Gm23793-201ENSMUST00000179396 117 ntBASIC3.08□□□□□ -1.92
Cbx4O55187 Gm29231-201ENSMUST00000179850 319 ntBASIC3.08□□□□□ -1.92
Cbx4O55187 Gm26866-201ENSMUST00000180414 802 ntBASIC3.08□□□□□ -1.92
Cbx4O55187 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC3.08□□□□□ -1.92
Cbx4O55187 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC3.08□□□□□ -1.92
Cbx4O55187 Gm37313-201ENSMUST00000191673 290 ntBASIC3.08□□□□□ -1.92
Cbx4O55187 Gm8242-202ENSMUST00000193056 475 ntBASIC3.08□□□□□ -1.92
Cbx4O55187 Gm6059-201ENSMUST00000196903 340 ntBASIC3.08□□□□□ -1.92
Cbx4O55187 Gm18982-201ENSMUST00000198118 529 ntBASIC3.08□□□□□ -1.92
Cbx4O55187 Gm44266-201ENSMUST00000205235 500 ntBASIC3.08□□□□□ -1.92
Cbx4O55187 Gm45273-201ENSMUST00000211559 281 ntBASIC3.08□□□□□ -1.92
Cbx4O55187 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.08□□□□□ -1.92
Cbx4O55187 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.08□□□□□ -1.92
Cbx4O55187 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Cbx4O55187 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.08□□□□□ -1.92
Cbx4O55187 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Cbx4O55187 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Cbx4O55187 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Cbx4O55187 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.07□□□□□ -1.92
Cbx4O55187 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.07□□□□□ -1.92
Cbx4O55187 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3.07□□□□□ -1.92
Cbx4O55187 Gm11859-201ENSMUST00000118099 455 ntBASIC3.07□□□□□ -1.92
Cbx4O55187 Gm26477-201ENSMUST00000122617 323 ntBASIC3.07□□□□□ -1.92
Cbx4O55187 Gm22718-201ENSMUST00000122701 315 ntBASIC3.07□□□□□ -1.92
Cbx4O55187 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.07□□□□□ -1.92
Cbx4O55187 Gm22534-201ENSMUST00000158173 104 ntBASIC3.07□□□□□ -1.92
Cbx4O55187 Gm22891-201ENSMUST00000158641 164 ntBASIC3.07□□□□□ -1.92
Cbx4O55187 Gm16038-201ENSMUST00000159317 193 ntBASIC3.07□□□□□ -1.92
Cbx4O55187 Gm27013-201ENSMUST00000182441 1024 ntBASIC3.07□□□□□ -1.92
Cbx4O55187 Gm7329-201ENSMUST00000185915 210 ntBASIC3.07□□□□□ -1.92
Cbx4O55187 Gm28740-201ENSMUST00000186142 215 ntBASIC3.07□□□□□ -1.92
Cbx4O55187 Gm28418-201ENSMUST00000186179 423 ntBASIC3.07□□□□□ -1.92
Cbx4O55187 Gm29429-201ENSMUST00000187071 121 ntBASIC3.07□□□□□ -1.92
Cbx4O55187 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC3.07□□□□□ -1.92
Cbx4O55187 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Cbx4O55187 Gm43035-201ENSMUST00000197626 517 ntBASIC3.07□□□□□ -1.92
Cbx4O55187 Gm6012-201ENSMUST00000210821 730 ntBASIC3.07□□□□□ -1.92
Cbx4O55187 Gm5023-201ENSMUST00000217442 587 ntBASIC3.07□□□□□ -1.92
Cbx4O55187 AC140477.1-201ENSMUST00000222354 246 ntBASIC3.07□□□□□ -1.92
Cbx4O55187 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC3.07□□□□□ -1.92
Cbx4O55187 AC154515.2-201ENSMUST00000226093 406 ntBASIC3.07□□□□□ -1.92
Cbx4O55187 AC117202.2-201ENSMUST00000226491 1101 ntBASIC3.07□□□□□ -1.92
Cbx4O55187 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Cbx4O55187 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Cbx4O55187 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Cbx4O55187 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.07□□□□□ -1.92
Cbx4O55187 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.07□□□□□ -1.92
Cbx4O55187 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
Cbx4O55187 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
Cbx4O55187 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.06□□□□□ -1.92
Cbx4O55187 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Cbx4O55187 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Cbx4O55187 Snord116l9-201ENSMUST00000101891 94 ntBASIC3.06□□□□□ -1.92
Cbx4O55187 Gm26504-201ENSMUST00000102033 94 ntBASIC3.06□□□□□ -1.92
Cbx4O55187 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Cbx4O55187 Gm24890-201ENSMUST00000104389 102 ntBASIC3.06□□□□□ -1.92
Cbx4O55187 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Cbx4O55187 Gm14518-201ENSMUST00000117351 542 ntBASIC3.06□□□□□ -1.92
Cbx4O55187 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Cbx4O55187 Gm13153-201ENSMUST00000120969 637 ntBASIC3.06□□□□□ -1.92
Cbx4O55187 Gm22957-201ENSMUST00000122511 123 ntBASIC3.06□□□□□ -1.92
Cbx4O55187 Gm23791-201ENSMUST00000122553 293 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 143.9 ms