Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Mup-ps15-201ENSMUST00000121741 539 ntBASIC1.35□□□□□ -2.19
Hmgb3O54879 Defa-ps6-201ENSMUST00000122172 282 ntBASIC1.35□□□□□ -2.19
Hmgb3O54879 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC1.35□□□□□ -2.19
Hmgb3O54879 Gm23958-201ENSMUST00000157207 105 ntBASIC1.35□□□□□ -2.19
Hmgb3O54879 Gm26348-201ENSMUST00000157528 240 ntBASIC1.35□□□□□ -2.19
Hmgb3O54879 Gm25224-201ENSMUST00000158195 68 ntBASIC1.35□□□□□ -2.19
Hmgb3O54879 Gm22666-201ENSMUST00000158717 164 ntBASIC1.35□□□□□ -2.19
Hmgb3O54879 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC1.35□□□□□ -2.19
Hmgb3O54879 Gm19932-201ENSMUST00000177033 313 ntBASIC1.35□□□□□ -2.19
Hmgb3O54879 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC1.35□□□□□ -2.19
Hmgb3O54879 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
Hmgb3O54879 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC1.35□□□□□ -2.19
Hmgb3O54879 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
Hmgb3O54879 Gm44182-201ENSMUST00000204052 115 ntBASIC1.35□□□□□ -2.19
Hmgb3O54879 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Hmgb3O54879 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
Hmgb3O54879 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
Hmgb3O54879 Gm23040-201ENSMUST00000083869 163 ntBASIC1.35□□□□□ -2.19
Hmgb3O54879 Gm7974-201ENSMUST00000117154 408 ntBASIC1.34□□□□□ -2.19
Hmgb3O54879 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
Hmgb3O54879 Gm8207-201ENSMUST00000171204 502 ntBASIC1.34□□□□□ -2.19
Hmgb3O54879 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.34□□□□□ -2.19
Hmgb3O54879 Mir7678-201ENSMUST00000185076 71 ntBASIC1.34□□□□□ -2.19
Hmgb3O54879 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.19
Hmgb3O54879 Gm19891-201ENSMUST00000189771 303 ntBASIC1.34□□□□□ -2.19
Hmgb3O54879 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.34□□□□□ -2.19
Hmgb3O54879 Gm44391-201ENSMUST00000198490 93 ntBASIC1.34□□□□□ -2.19
Hmgb3O54879 AC155839.1-201ENSMUST00000200105 147 ntBASIC1.34□□□□□ -2.19
Hmgb3O54879 Gm44524-201ENSMUST00000203899 271 ntBASIC1.34□□□□□ -2.19
Hmgb3O54879 Gm44050-201ENSMUST00000204263 527 ntBASIC1.34□□□□□ -2.19
Hmgb3O54879 Gm44088-201ENSMUST00000204595 237 ntBASIC1.34□□□□□ -2.19
Hmgb3O54879 Gm45636-201ENSMUST00000210497 1064 ntBASIC1.34□□□□□ -2.19
Hmgb3O54879 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC1.34□□□□□ -2.19
Hmgb3O54879 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC1.34□□□□□ -2.19
Hmgb3O54879 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
Hmgb3O54879 Gm11268-201ENSMUST00000118347 267 ntBASIC1.33□□□□□ -2.2
Hmgb3O54879 Gm24056-201ENSMUST00000158617 146 ntBASIC1.33□□□□□ -2.2
Hmgb3O54879 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
Hmgb3O54879 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Hmgb3O54879 Gm28058-201ENSMUST00000186421 264 ntBASIC1.33□□□□□ -2.2
Hmgb3O54879 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC1.33□□□□□ -2.2
Hmgb3O54879 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC1.33□□□□□ -2.2
Hmgb3O54879 Gm31511-201ENSMUST00000193134 657 ntBASIC1.33□□□□□ -2.2
Hmgb3O54879 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
Hmgb3O54879 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.33□□□□□ -2.2
Hmgb3O54879 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC1.33□□□□□ -2.2
Hmgb3O54879 Gm18729-201ENSMUST00000217230 621 ntBASIC1.33□□□□□ -2.2
Hmgb3O54879 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC1.33□□□□□ -2.2
Hmgb3O54879 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.33□□□□□ -2.2
Hmgb3O54879 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
Hmgb3O54879 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC1.33□□□□□ -2.2
Hmgb3O54879 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC1.32□□□□□ -2.2
Hmgb3O54879 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
Hmgb3O54879 Gm23691-201ENSMUST00000101878 107 ntBASIC1.32□□□□□ -2.2
Hmgb3O54879 Gm14657-201ENSMUST00000117461 302 ntBASIC1.32□□□□□ -2.2
Hmgb3O54879 Gm14358-201ENSMUST00000118458 403 ntBASIC1.32□□□□□ -2.2
Hmgb3O54879 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC1.32□□□□□ -2.2
Hmgb3O54879 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC1.32□□□□□ -2.2
Hmgb3O54879 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
Hmgb3O54879 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC1.32□□□□□ -2.2
Hmgb3O54879 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC1.32□□□□□ -2.2
Hmgb3O54879 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC1.32□□□□□ -2.2
Hmgb3O54879 Gm25994-201ENSMUST00000175392 101 ntBASIC1.32□□□□□ -2.2
Hmgb3O54879 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC1.32□□□□□ -2.2
Hmgb3O54879 Gm26189-201ENSMUST00000179879 107 ntBASIC1.32□□□□□ -2.2
Hmgb3O54879 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC1.32□□□□□ -2.2
Hmgb3O54879 Gm19649-201ENSMUST00000201126 822 ntBASIC1.32□□□□□ -2.2
Hmgb3O54879 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC1.32□□□□□ -2.2
Hmgb3O54879 Gm43955-201ENSMUST00000204332 142 ntBASIC1.32□□□□□ -2.2
Hmgb3O54879 AC154552.4-201ENSMUST00000222171 151 ntBASIC1.32□□□□□ -2.2
Hmgb3O54879 AC147633.1-201ENSMUST00000225134 259 ntBASIC1.32□□□□□ -2.2
Hmgb3O54879 AC131068.1-201ENSMUST00000226891 482 ntBASIC1.32□□□□□ -2.2
Hmgb3O54879 AC109172.1-201ENSMUST00000227503 187 ntBASIC1.32□□□□□ -2.2
Hmgb3O54879 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Hmgb3O54879 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
Hmgb3O54879 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
Hmgb3O54879 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
Hmgb3O54879 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
Hmgb3O54879 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
Hmgb3O54879 Gm12889-201ENSMUST00000118684 241 ntBASIC1.31□□□□□ -2.2
Hmgb3O54879 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC1.31□□□□□ -2.2
Hmgb3O54879 Gm13555-201ENSMUST00000121668 319 ntBASIC1.31□□□□□ -2.2
Hmgb3O54879 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC1.31□□□□□ -2.2
Hmgb3O54879 Gm23332-201ENSMUST00000157424 275 ntBASIC1.31□□□□□ -2.2
Hmgb3O54879 Gm22315-201ENSMUST00000158010 143 ntBASIC1.31□□□□□ -2.2
Hmgb3O54879 Gm22257-201ENSMUST00000158687 301 ntBASIC1.31□□□□□ -2.2
Hmgb3O54879 Gm24348-201ENSMUST00000158710 130 ntBASIC1.31□□□□□ -2.2
Hmgb3O54879 Gm26157-201ENSMUST00000158974 126 ntBASIC1.31□□□□□ -2.2
Hmgb3O54879 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Hmgb3O54879 Gm22192-201ENSMUST00000175128 85 ntBASIC1.31□□□□□ -2.2
Hmgb3O54879 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC1.31□□□□□ -2.2
Hmgb3O54879 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC1.31□□□□□ -2.2
Hmgb3O54879 Gm27248-201ENSMUST00000184004 166 ntBASIC1.31□□□□□ -2.2
Hmgb3O54879 Snord43-201ENSMUST00000199549 108 ntBASIC1.31□□□□□ -2.2
Hmgb3O54879 Gm18598-201ENSMUST00000207724 597 ntBASIC1.31□□□□□ -2.2
Hmgb3O54879 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC1.31□□□□□ -2.2
Hmgb3O54879 CT573422.1-201ENSMUST00000216655 405 ntBASIC1.31□□□□□ -2.2
Hmgb3O54879 AC164597.2-201ENSMUST00000226738 603 ntBASIC1.31□□□□□ -2.2
Hmgb3O54879 AC133654.1-201ENSMUST00000228411 672 ntBASIC1.31□□□□□ -2.2
Hmgb3O54879 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 120.5 ms