Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm37761-201ENSMUST00000194989 2098 ntBASIC1.48□□□□□ -2.17
Sdc4O35988 Gm12765-201ENSMUST00000117273 615 ntBASIC1.48□□□□□ -2.17
Sdc4O35988 Gm15029-201ENSMUST00000119742 199 ntBASIC1.48□□□□□ -2.17
Sdc4O35988 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC1.48□□□□□ -2.17
Sdc4O35988 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC1.48□□□□□ -2.17
Sdc4O35988 Gm22307-201ENSMUST00000180019 107 ntBASIC1.48□□□□□ -2.17
Sdc4O35988 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC1.48□□□□□ -2.17
Sdc4O35988 Gm29192-201ENSMUST00000190942 377 ntBASIC1.48□□□□□ -2.17
Sdc4O35988 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC1.48□□□□□ -2.17
Sdc4O35988 Gm33866-201ENSMUST00000196911 289 ntBASIC1.48□□□□□ -2.17
Sdc4O35988 Gm42924-201ENSMUST00000197261 185 ntBASIC1.48□□□□□ -2.17
Sdc4O35988 Gm43578-201ENSMUST00000201250 459 ntBASIC1.48□□□□□ -2.17
Sdc4O35988 Gm44962-201ENSMUST00000206460 279 ntBASIC1.48□□□□□ -2.17
Sdc4O35988 Gm29920-201ENSMUST00000206876 754 ntBASIC1.48□□□□□ -2.17
Sdc4O35988 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC1.48□□□□□ -2.17
Sdc4O35988 AC105958.2-201ENSMUST00000214167 191 ntBASIC1.48□□□□□ -2.17
Sdc4O35988 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.48□□□□□ -2.17
Sdc4O35988 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Sdc4O35988 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Sdc4O35988 Mir208a-201ENSMUST00000083498 83 ntBASIC1.48□□□□□ -2.17
Sdc4O35988 Gm23058-201ENSMUST00000093703 107 ntBASIC1.48□□□□□ -2.17
Sdc4O35988 Gm44708-201ENSMUST00000205580 2237 ntBASIC1.48□□□□□ -2.17
Sdc4O35988 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC1.48□□□□□ -2.17
Sdc4O35988 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.47□□□□□ -2.17
Sdc4O35988 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.47□□□□□ -2.17
Sdc4O35988 Igkv13-87-201ENSMUST00000114214 286 ntBASIC1.47□□□□□ -2.17
Sdc4O35988 Gm14566-201ENSMUST00000118915 321 ntBASIC1.47□□□□□ -2.17
Sdc4O35988 Gm14815-201ENSMUST00000120060 488 ntBASIC1.47□□□□□ -2.17
Sdc4O35988 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.47□□□□□ -2.17
Sdc4O35988 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC1.47□□□□□ -2.17
Sdc4O35988 Gm25026-201ENSMUST00000175017 188 ntBASIC1.47□□□□□ -2.17
Sdc4O35988 Gm23967-201ENSMUST00000175062 78 ntBASIC1.47□□□□□ -2.17
Sdc4O35988 Gm20698-201ENSMUST00000175657 233 ntBASIC1.47□□□□□ -2.17
Sdc4O35988 Gm22131-201ENSMUST00000178415 94 ntBASIC1.47□□□□□ -2.17
Sdc4O35988 Gm27265-201ENSMUST00000183559 77 ntBASIC1.47□□□□□ -2.17
Sdc4O35988 Gm27761-201ENSMUST00000184091 131 ntBASIC1.47□□□□□ -2.17
Sdc4O35988 Gm42454-201ENSMUST00000196805 1181 ntBASIC1.47□□□□□ -2.17
Sdc4O35988 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.47□□□□□ -2.17
Sdc4O35988 Gm44720-201ENSMUST00000206076 260 ntBASIC1.47□□□□□ -2.17
Sdc4O35988 Gm44634-201ENSMUST00000206119 152 ntBASIC1.47□□□□□ -2.17
Sdc4O35988 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC1.47□□□□□ -2.17
Sdc4O35988 AC123803.1-201ENSMUST00000216093 189 ntBASIC1.47□□□□□ -2.17
Sdc4O35988 CT572985.2-201ENSMUST00000220496 211 ntBASIC1.47□□□□□ -2.17
Sdc4O35988 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Sdc4O35988 Gm14793-201ENSMUST00000118739 311 ntBASIC1.46□□□□□ -2.18
Sdc4O35988 Gm12706-201ENSMUST00000121588 698 ntBASIC1.46□□□□□ -2.18
Sdc4O35988 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.46□□□□□ -2.18
Sdc4O35988 Gm24911-201ENSMUST00000157292 136 ntBASIC1.46□□□□□ -2.18
Sdc4O35988 Gm24885-201ENSMUST00000158783 270 ntBASIC1.46□□□□□ -2.18
Sdc4O35988 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC1.46□□□□□ -2.18
Sdc4O35988 Gm25996-201ENSMUST00000175393 117 ntBASIC1.46□□□□□ -2.18
Sdc4O35988 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.46□□□□□ -2.18
Sdc4O35988 Gm5317-201ENSMUST00000204445 847 ntBASIC1.46□□□□□ -2.18
Sdc4O35988 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Sdc4O35988 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Sdc4O35988 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC1.46□□□□□ -2.18
Sdc4O35988 CT010455.1-201ENSMUST00000218579 413 ntBASIC1.46□□□□□ -2.18
Sdc4O35988 Gm6109-201ENSMUST00000223297 348 ntBASIC1.46□□□□□ -2.18
Sdc4O35988 AC154262.1-201ENSMUST00000225976 286 ntBASIC1.46□□□□□ -2.18
Sdc4O35988 Gm16976-205ENSMUST00000227324 226 ntBASIC1.46□□□□□ -2.18
Sdc4O35988 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Sdc4O35988 Gm15110-201ENSMUST00000117545 881 ntBASIC1.45□□□□□ -2.18
Sdc4O35988 Gm15215-201ENSMUST00000117773 489 ntBASIC1.45□□□□□ -2.18
Sdc4O35988 Gm15112-201ENSMUST00000120152 860 ntBASIC1.45□□□□□ -2.18
Sdc4O35988 Gm9001-201ENSMUST00000121642 399 ntBASIC1.45□□□□□ -2.18
Sdc4O35988 Gm16411-201ENSMUST00000122164 1100 ntBASIC1.45□□□□□ -2.18
Sdc4O35988 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.45□□□□□ -2.18
Sdc4O35988 Gm27326-201ENSMUST00000183504 95 ntBASIC1.45□□□□□ -2.18
Sdc4O35988 Gm27493-201ENSMUST00000184128 78 ntBASIC1.45□□□□□ -2.18
Sdc4O35988 Gm9318-201ENSMUST00000222444 438 ntBASIC1.45□□□□□ -2.18
Sdc4O35988 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC1.45□□□□□ -2.18
Sdc4O35988 Gm43498-201ENSMUST00000202002 1486 ntBASIC1.44□□□□□ -2.18
Sdc4O35988 AC153881.3-201ENSMUST00000218494 1561 ntBASIC1.44□□□□□ -2.18
Sdc4O35988 Gm22270-201ENSMUST00000104034 132 ntBASIC1.44□□□□□ -2.18
Sdc4O35988 Gm23336-201ENSMUST00000117023 123 ntBASIC1.44□□□□□ -2.18
Sdc4O35988 Gm15176-201ENSMUST00000117734 135 ntBASIC1.44□□□□□ -2.18
Sdc4O35988 Gm15381-201ENSMUST00000121501 1156 ntBASIC1.44□□□□□ -2.18
Sdc4O35988 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
Sdc4O35988 Gm22963-201ENSMUST00000157960 91 ntBASIC1.44□□□□□ -2.18
Sdc4O35988 Gm19932-201ENSMUST00000177033 313 ntBASIC1.44□□□□□ -2.18
Sdc4O35988 Gm11395-201ENSMUST00000181011 499 ntBASIC1.44□□□□□ -2.18
Sdc4O35988 Gm29513-201ENSMUST00000185741 202 ntBASIC1.44□□□□□ -2.18
Sdc4O35988 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
Sdc4O35988 Gm18775-201ENSMUST00000190763 586 ntBASIC1.44□□□□□ -2.18
Sdc4O35988 Gm43978-201ENSMUST00000203491 451 ntBASIC1.44□□□□□ -2.18
Sdc4O35988 Gm20948-201ENSMUST00000211091 449 ntBASIC1.44□□□□□ -2.18
Sdc4O35988 Gm25126-201ENSMUST00000083343 102 ntBASIC1.44□□□□□ -2.18
Sdc4O35988 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Sdc4O35988 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Sdc4O35988 Gm42942-201ENSMUST00000196086 1328 ntBASIC1.43□□□□□ -2.18
Sdc4O35988 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.43□□□□□ -2.18
Sdc4O35988 Gm23463-201ENSMUST00000122468 99 ntBASIC1.43□□□□□ -2.18
Sdc4O35988 Gm24895-201ENSMUST00000122742 74 ntBASIC1.43□□□□□ -2.18
Sdc4O35988 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC1.43□□□□□ -2.18
Sdc4O35988 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC1.43□□□□□ -2.18
Sdc4O35988 Gm23473-201ENSMUST00000158883 116 ntBASIC1.43□□□□□ -2.18
Sdc4O35988 Gm17085-201ENSMUST00000165425 502 ntBASIC1.43□□□□□ -2.18
Sdc4O35988 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Sdc4O35988 Gm2878-201ENSMUST00000170173 486 ntBASIC1.43□□□□□ -2.18
Sdc4O35988 Gm22111-201ENSMUST00000178010 79 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms