Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Gm44084-201ENSMUST00000203947 409 ntBASIC3.03□□□□□ -1.92
Clk3O35492 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.03□□□□□ -1.92
Clk3O35492 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC3.03□□□□□ -1.92
Clk3O35492 AC154296.2-201ENSMUST00000214696 545 ntBASIC3.03□□□□□ -1.92
Clk3O35492 CT485612.2-201ENSMUST00000223014 151 ntBASIC3.03□□□□□ -1.92
Clk3O35492 Mir10a-201ENSMUST00000083585 110 ntBASIC3.03□□□□□ -1.92
Clk3O35492 Mir101b-201ENSMUST00000083622 97 ntBASIC3.03□□□□□ -1.92
Clk3O35492 Gm24765-201ENSMUST00000083691 103 ntBASIC3.03□□□□□ -1.92
Clk3O35492 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Clk3O35492 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.03□□□□□ -1.92
Clk3O35492 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Clk3O35492 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Clk3O35492 AC152159.1-201ENSMUST00000226719 2769 ntBASIC3.02□□□□□ -1.93
Clk3O35492 Gm25764-201ENSMUST00000104092 134 ntBASIC3.02□□□□□ -1.93
Clk3O35492 Mir743b-201ENSMUST00000104751 77 ntBASIC3.02□□□□□ -1.93
Clk3O35492 Gm42606-201ENSMUST00000114209 239 ntBASIC3.02□□□□□ -1.93
Clk3O35492 Gm24936-201ENSMUST00000122598 247 ntBASIC3.02□□□□□ -1.93
Clk3O35492 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.02□□□□□ -1.93
Clk3O35492 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC3.02□□□□□ -1.93
Clk3O35492 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Clk3O35492 Gm23000-201ENSMUST00000157083 139 ntBASIC3.02□□□□□ -1.93
Clk3O35492 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC3.02□□□□□ -1.93
Clk3O35492 Gm29352-201ENSMUST00000188054 544 ntBASIC3.02□□□□□ -1.93
Clk3O35492 Gm28069-201ENSMUST00000189926 214 ntBASIC3.02□□□□□ -1.93
Clk3O35492 Gm34015-201ENSMUST00000194908 451 ntBASIC3.02□□□□□ -1.93
Clk3O35492 Gm37399-201ENSMUST00000195224 416 ntBASIC3.02□□□□□ -1.93
Clk3O35492 Gm7871-201ENSMUST00000195346 618 ntBASIC3.02□□□□□ -1.93
Clk3O35492 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.02□□□□□ -1.93
Clk3O35492 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.02□□□□□ -1.93
Clk3O35492 Gm43472-201ENSMUST00000200175 154 ntBASIC3.02□□□□□ -1.93
Clk3O35492 Gm43039-201ENSMUST00000202883 963 ntBASIC3.02□□□□□ -1.93
Clk3O35492 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC3.02□□□□□ -1.93
Clk3O35492 AC164567.2-201ENSMUST00000219363 445 ntBASIC3.02□□□□□ -1.93
Clk3O35492 CT571268.1-201ENSMUST00000222320 407 ntBASIC3.02□□□□□ -1.93
Clk3O35492 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.02□□□□□ -1.93
Clk3O35492 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Clk3O35492 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Clk3O35492 Mir208a-201ENSMUST00000083498 83 ntBASIC3.02□□□□□ -1.93
Clk3O35492 Mir103-2-201ENSMUST00000083629 86 ntBASIC3.02□□□□□ -1.93
Clk3O35492 Gm23042-201ENSMUST00000083866 101 ntBASIC3.02□□□□□ -1.93
Clk3O35492 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC3.02□□□□□ -1.93
Clk3O35492 Gm43230-201ENSMUST00000200980 2129 ntBASIC3.02□□□□□ -1.93
Clk3O35492 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
Clk3O35492 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
Clk3O35492 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Clk3O35492 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Clk3O35492 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Clk3O35492 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Clk3O35492 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Clk3O35492 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Clk3O35492 Gm26423-201ENSMUST00000104277 128 ntBASIC3.01□□□□□ -1.93
Clk3O35492 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
Clk3O35492 Gm14020-201ENSMUST00000118165 662 ntBASIC3.01□□□□□ -1.93
Clk3O35492 Gm8260-201ENSMUST00000119230 353 ntBASIC3.01□□□□□ -1.93
Clk3O35492 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.01□□□□□ -1.93
Clk3O35492 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC3.01□□□□□ -1.93
Clk3O35492 Gm6265-201ENSMUST00000149263 231 ntBASIC3.01□□□□□ -1.93
Clk3O35492 Gm26100-201ENSMUST00000157245 127 ntBASIC3.01□□□□□ -1.93
Clk3O35492 Gm24577-201ENSMUST00000158580 63 ntBASIC3.01□□□□□ -1.93
Clk3O35492 Gm24553-201ENSMUST00000158653 131 ntBASIC3.01□□□□□ -1.93
Clk3O35492 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC3.01□□□□□ -1.93
Clk3O35492 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC3.01□□□□□ -1.93
Clk3O35492 Gm29231-201ENSMUST00000179850 319 ntBASIC3.01□□□□□ -1.93
Clk3O35492 Gm28661-201ENSMUST00000188231 681 ntBASIC3.01□□□□□ -1.93
Clk3O35492 Gm43529-201ENSMUST00000199178 412 ntBASIC3.01□□□□□ -1.93
Clk3O35492 Gm43505-201ENSMUST00000200579 139 ntBASIC3.01□□□□□ -1.93
Clk3O35492 AC166358.7-201ENSMUST00000221132 108 ntBASIC3.01□□□□□ -1.93
Clk3O35492 AC125543.5-201ENSMUST00000222799 108 ntBASIC3.01□□□□□ -1.93
Clk3O35492 AC192333.1-201ENSMUST00000224573 376 ntBASIC3.01□□□□□ -1.93
Clk3O35492 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC3.01□□□□□ -1.93
Clk3O35492 Gm5265-201ENSMUST00000076828 342 ntBASIC3.01□□□□□ -1.93
Clk3O35492 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Clk3O35492 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
Clk3O35492 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Clk3O35492 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Clk3O35492 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Clk3O35492 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Clk3O35492 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
Clk3O35492 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Clk3O35492 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.01□□□□□ -1.93
Clk3O35492 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3□□□□□ -1.93
Clk3O35492 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
Clk3O35492 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Clk3O35492 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Clk3O35492 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3□□□□□ -1.93
Clk3O35492 Gm14287-201ENSMUST00000121060 117 ntBASIC3□□□□□ -1.93
Clk3O35492 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3□□□□□ -1.93
Clk3O35492 Gm25977-201ENSMUST00000158697 85 ntBASIC3□□□□□ -1.93
Clk3O35492 Gm6264-202ENSMUST00000162896 1217 ntBASIC3□□□□□ -1.93
Clk3O35492 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC3□□□□□ -1.93
Clk3O35492 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC3□□□□□ -1.93
Clk3O35492 Gm45730-201ENSMUST00000212560 395 ntBASIC3□□□□□ -1.93
Clk3O35492 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC3□□□□□ -1.93
Clk3O35492 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC3□□□□□ -1.93
Clk3O35492 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC3□□□□□ -1.93
Clk3O35492 Gm22739-201ENSMUST00000083437 160 ntBASIC3□□□□□ -1.93
Clk3O35492 Mir137-201ENSMUST00000083635 73 ntBASIC3□□□□□ -1.93
Clk3O35492 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Clk3O35492 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Clk3O35492 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 94.6 ms