Protein–RNA interactions for Protein: D3Z5T1

Ccdc78, Coiled-coil domain-containing protein 78, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc78D3Z5T1 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.59□□□□□ -2
Ccdc78D3Z5T1 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.58□□□□□ -2
Ccdc78D3Z5T1 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Ccdc78D3Z5T1 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Ccdc78D3Z5T1 Gm23551-201ENSMUST00000116852 121 ntBASIC2.58□□□□□ -2
Ccdc78D3Z5T1 Gm14602-201ENSMUST00000118625 340 ntBASIC2.58□□□□□ -2
Ccdc78D3Z5T1 Gm12617-201ENSMUST00000121268 381 ntBASIC2.58□□□□□ -2
Ccdc78D3Z5T1 Gm12956-201ENSMUST00000122184 414 ntBASIC2.58□□□□□ -2
Ccdc78D3Z5T1 Gm23885-201ENSMUST00000122682 294 ntBASIC2.58□□□□□ -2
Ccdc78D3Z5T1 Gm23206-201ENSMUST00000122720 184 ntBASIC2.58□□□□□ -2
Ccdc78D3Z5T1 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC2.58□□□□□ -2
Ccdc78D3Z5T1 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC2.58□□□□□ -2
Ccdc78D3Z5T1 Gm9593-201ENSMUST00000166034 469 ntBASIC2.58□□□□□ -2
Ccdc78D3Z5T1 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC2.58□□□□□ -2
Ccdc78D3Z5T1 Gm22290-201ENSMUST00000177655 107 ntBASIC2.58□□□□□ -2
Ccdc78D3Z5T1 Gm22583-201ENSMUST00000178031 107 ntBASIC2.58□□□□□ -2
Ccdc78D3Z5T1 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC2.58□□□□□ -2
Ccdc78D3Z5T1 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC2.58□□□□□ -2
Ccdc78D3Z5T1 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC2.58□□□□□ -2
Ccdc78D3Z5T1 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC2.58□□□□□ -2
Ccdc78D3Z5T1 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC2.58□□□□□ -2
Ccdc78D3Z5T1 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC2.58□□□□□ -2
Ccdc78D3Z5T1 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC2.58□□□□□ -2
Ccdc78D3Z5T1 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC2.58□□□□□ -2
Ccdc78D3Z5T1 Snord116l12-201ENSMUST00000179816 94 ntBASIC2.58□□□□□ -2
Ccdc78D3Z5T1 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC2.58□□□□□ -2
Ccdc78D3Z5T1 Gm43722-201ENSMUST00000196054 124 ntBASIC2.58□□□□□ -2
Ccdc78D3Z5T1 Gm18635-201ENSMUST00000199020 1060 ntBASIC2.58□□□□□ -2
Ccdc78D3Z5T1 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.58□□□□□ -2
Ccdc78D3Z5T1 Gm19326-201ENSMUST00000219818 326 ntBASIC2.58□□□□□ -2
Ccdc78D3Z5T1 AC156560.1-201ENSMUST00000221425 256 ntBASIC2.58□□□□□ -2
Ccdc78D3Z5T1 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Ccdc78D3Z5T1 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC2.58□□□□□ -2
Ccdc78D3Z5T1 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.57□□□□□ -2
Ccdc78D3Z5T1 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
Ccdc78D3Z5T1 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Ccdc78D3Z5T1 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.57□□□□□ -2
Ccdc78D3Z5T1 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC2.57□□□□□ -2
Ccdc78D3Z5T1 Gm14899-201ENSMUST00000118673 548 ntBASIC2.57□□□□□ -2
Ccdc78D3Z5T1 Gm16428-201ENSMUST00000121193 723 ntBASIC2.57□□□□□ -2
Ccdc78D3Z5T1 Gm24937-201ENSMUST00000122597 134 ntBASIC2.57□□□□□ -2
Ccdc78D3Z5T1 Gm24475-201ENSMUST00000157435 143 ntBASIC2.57□□□□□ -2
Ccdc78D3Z5T1 Gm22611-201ENSMUST00000158288 150 ntBASIC2.57□□□□□ -2
Ccdc78D3Z5T1 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC2.57□□□□□ -2
Ccdc78D3Z5T1 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC2.57□□□□□ -2
Ccdc78D3Z5T1 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC2.57□□□□□ -2
Ccdc78D3Z5T1 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
Ccdc78D3Z5T1 Gm37757-201ENSMUST00000193072 210 ntBASIC2.57□□□□□ -2
Ccdc78D3Z5T1 Gm18341-201ENSMUST00000197538 622 ntBASIC2.57□□□□□ -2
Ccdc78D3Z5T1 Mir378a-201ENSMUST00000198300 66 ntBASIC2.57□□□□□ -2
Ccdc78D3Z5T1 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.57□□□□□ -2
Ccdc78D3Z5T1 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC2.57□□□□□ -2
Ccdc78D3Z5T1 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC2.57□□□□□ -2
Ccdc78D3Z5T1 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC2.57□□□□□ -2
Ccdc78D3Z5T1 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.57□□□□□ -2
Ccdc78D3Z5T1 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.57□□□□□ -2
Ccdc78D3Z5T1 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC2.57□□□□□ -2
Ccdc78D3Z5T1 Gm22810-201ENSMUST00000082741 158 ntBASIC2.57□□□□□ -2
Ccdc78D3Z5T1 Gm23448-201ENSMUST00000083151 104 ntBASIC2.57□□□□□ -2
Ccdc78D3Z5T1 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Ccdc78D3Z5T1 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC2.56□□□□□ -2
Ccdc78D3Z5T1 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC2.56□□□□□ -2
Ccdc78D3Z5T1 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC2.56□□□□□ -2
Ccdc78D3Z5T1 Gm24464-201ENSMUST00000179697 107 ntBASIC2.56□□□□□ -2
Ccdc78D3Z5T1 Gm29550-201ENSMUST00000185543 285 ntBASIC2.56□□□□□ -2
Ccdc78D3Z5T1 Gm28474-201ENSMUST00000188501 315 ntBASIC2.56□□□□□ -2
Ccdc78D3Z5T1 Igkv1-136-201ENSMUST00000200635 297 ntBASIC2.56□□□□□ -2
Ccdc78D3Z5T1 Gm42857-201ENSMUST00000200823 339 ntBASIC2.56□□□□□ -2
Ccdc78D3Z5T1 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.56□□□□□ -2
Ccdc78D3Z5T1 Gm43901-201ENSMUST00000203247 453 ntBASIC2.56□□□□□ -2
Ccdc78D3Z5T1 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC2.56□□□□□ -2
Ccdc78D3Z5T1 Gm44478-201ENSMUST00000204875 114 ntBASIC2.56□□□□□ -2
Ccdc78D3Z5T1 Gm45772-201ENSMUST00000212961 240 ntBASIC2.56□□□□□ -2
Ccdc78D3Z5T1 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC2.56□□□□□ -2
Ccdc78D3Z5T1 Gm20304-201ENSMUST00000218168 444 ntBASIC2.56□□□□□ -2
Ccdc78D3Z5T1 AC102352.1-201ENSMUST00000224187 582 ntBASIC2.56□□□□□ -2
Ccdc78D3Z5T1 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.56□□□□□ -2
Ccdc78D3Z5T1 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC2.56□□□□□ -2
Ccdc78D3Z5T1 Gm25628-201ENSMUST00000084002 105 ntBASIC2.56□□□□□ -2
Ccdc78D3Z5T1 Gm14445-201ENSMUST00000117051 1484 ntBASIC2.56□□□□□ -2
Ccdc78D3Z5T1 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
Ccdc78D3Z5T1 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Ccdc78D3Z5T1 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC2.55□□□□□ -2
Ccdc78D3Z5T1 Gm12191-201ENSMUST00000118307 348 ntBASIC2.55□□□□□ -2
Ccdc78D3Z5T1 Gm9703-201ENSMUST00000119573 343 ntBASIC2.55□□□□□ -2
Ccdc78D3Z5T1 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC2.55□□□□□ -2
Ccdc78D3Z5T1 Gm14049-201ENSMUST00000121009 636 ntBASIC2.55□□□□□ -2
Ccdc78D3Z5T1 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.55□□□□□ -2
Ccdc78D3Z5T1 Gm25220-201ENSMUST00000157546 95 ntBASIC2.55□□□□□ -2
Ccdc78D3Z5T1 Gm22733-201ENSMUST00000158094 91 ntBASIC2.55□□□□□ -2
Ccdc78D3Z5T1 Gm17072-201ENSMUST00000166673 658 ntBASIC2.55□□□□□ -2
Ccdc78D3Z5T1 Gm3111-201ENSMUST00000167426 490 ntBASIC2.55□□□□□ -2
Ccdc78D3Z5T1 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC2.55□□□□□ -2
Ccdc78D3Z5T1 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC2.55□□□□□ -2
Ccdc78D3Z5T1 Gm25670-201ENSMUST00000178423 107 ntBASIC2.55□□□□□ -2
Ccdc78D3Z5T1 Gm26239-201ENSMUST00000178842 107 ntBASIC2.55□□□□□ -2
Ccdc78D3Z5T1 Gm25361-201ENSMUST00000179358 76 ntBASIC2.55□□□□□ -2
Ccdc78D3Z5T1 Gm24267-201ENSMUST00000179841 107 ntBASIC2.55□□□□□ -2
Ccdc78D3Z5T1 Gm27028-201ENSMUST00000182303 399 ntBASIC2.55□□□□□ -2
Ccdc78D3Z5T1 Gm5224-201ENSMUST00000183060 350 ntBASIC2.55□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms