Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 AC155715.1-201ENSMUST00000213575 463 ntBASIC1.03□□□□□ -2.24
Trav3-4A0A075B654 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.03□□□□□ -2.24
Trav3-4A0A075B654 AC165106.2-201ENSMUST00000226749 97 ntBASIC1.03□□□□□ -2.24
Trav3-4A0A075B654 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
Trav3-4A0A075B654 Gm25813-201ENSMUST00000082748 191 ntBASIC1.03□□□□□ -2.24
Trav3-4A0A075B654 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
Trav3-4A0A075B654 AC153881.3-201ENSMUST00000218494 1561 ntBASIC1.03□□□□□ -2.24
Trav3-4A0A075B654 Gm38255-201ENSMUST00000194910 2996 ntBASIC1.02□□□□□ -2.25
Trav3-4A0A075B654 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.02□□□□□ -2.25
Trav3-4A0A075B654 Gm12598-201ENSMUST00000117333 830 ntBASIC1.02□□□□□ -2.25
Trav3-4A0A075B654 Gm12871-201ENSMUST00000118758 438 ntBASIC1.02□□□□□ -2.25
Trav3-4A0A075B654 Gm15986-201ENSMUST00000122153 400 ntBASIC1.02□□□□□ -2.25
Trav3-4A0A075B654 Gm12956-201ENSMUST00000122184 414 ntBASIC1.02□□□□□ -2.25
Trav3-4A0A075B654 Gm6956-201ENSMUST00000134724 546 ntBASIC1.02□□□□□ -2.25
Trav3-4A0A075B654 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC1.02□□□□□ -2.25
Trav3-4A0A075B654 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC1.02□□□□□ -2.25
Trav3-4A0A075B654 Gm22944-201ENSMUST00000158662 133 ntBASIC1.02□□□□□ -2.25
Trav3-4A0A075B654 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC1.02□□□□□ -2.25
Trav3-4A0A075B654 Atp2b4-208ENSMUST00000167348 243 ntBASIC1.02□□□□□ -2.25
Trav3-4A0A075B654 Gm22693-201ENSMUST00000175049 442 ntBASIC1.02□□□□□ -2.25
Trav3-4A0A075B654 Gm24816-201ENSMUST00000175311 151 ntBASIC1.02□□□□□ -2.25
Trav3-4A0A075B654 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC1.02□□□□□ -2.25
Trav3-4A0A075B654 Gm28383-201ENSMUST00000187563 139 ntBASIC1.02□□□□□ -2.25
Trav3-4A0A075B654 Gm29262-201ENSMUST00000190084 196 ntBASIC1.02□□□□□ -2.25
Trav3-4A0A075B654 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC1.02□□□□□ -2.25
Trav3-4A0A075B654 Gm29950-201ENSMUST00000195273 237 ntBASIC1.02□□□□□ -2.25
Trav3-4A0A075B654 Gm43405-201ENSMUST00000198642 337 ntBASIC1.02□□□□□ -2.25
Trav3-4A0A075B654 Gm45207-201ENSMUST00000207469 145 ntBASIC1.02□□□□□ -2.25
Trav3-4A0A075B654 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC1.02□□□□□ -2.25
Trav3-4A0A075B654 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
Trav3-4A0A075B654 Gm31849-201ENSMUST00000220306 375 ntBASIC1.02□□□□□ -2.25
Trav3-4A0A075B654 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
Trav3-4A0A075B654 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
Trav3-4A0A075B654 Gm23245-201ENSMUST00000083370 135 ntBASIC1.02□□□□□ -2.25
Trav3-4A0A075B654 Gm25411-201ENSMUST00000083760 151 ntBASIC1.02□□□□□ -2.25
Trav3-4A0A075B654 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
Trav3-4A0A075B654 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
Trav3-4A0A075B654 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
Trav3-4A0A075B654 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
Trav3-4A0A075B654 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
Trav3-4A0A075B654 Gm43216-201ENSMUST00000196295 1333 ntBASIC1.01□□□□□ -2.25
Trav3-4A0A075B654 Gm2348-201ENSMUST00000108782 300 ntBASIC1.01□□□□□ -2.25
Trav3-4A0A075B654 Gm22538-201ENSMUST00000158169 299 ntBASIC1.01□□□□□ -2.25
Trav3-4A0A075B654 Gm3102-201ENSMUST00000164236 489 ntBASIC1.01□□□□□ -2.25
Trav3-4A0A075B654 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC1.01□□□□□ -2.25
Trav3-4A0A075B654 Mir1291-201ENSMUST00000199842 117 ntBASIC1.01□□□□□ -2.25
Trav3-4A0A075B654 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
Trav3-4A0A075B654 Gm44634-201ENSMUST00000206119 152 ntBASIC1.01□□□□□ -2.25
Trav3-4A0A075B654 AC174797.4-201ENSMUST00000225510 347 ntBASIC1.01□□□□□ -2.25
Trav3-4A0A075B654 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
Trav3-4A0A075B654 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
Trav3-4A0A075B654 Mir29c-201ENSMUST00000083614 88 ntBASIC1.01□□□□□ -2.25
Trav3-4A0A075B654 AC117226.1-201ENSMUST00000221635 3737 ntBASIC1.01□□□□□ -2.25
Trav3-4A0A075B654 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC1.01□□□□□ -2.25
Trav3-4A0A075B654 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC1.01□□□□□ -2.25
Trav3-4A0A075B654 Gm6923-201ENSMUST00000118343 406 ntBASIC1□□□□□ -2.25
Trav3-4A0A075B654 Gm13239-201ENSMUST00000119920 637 ntBASIC1□□□□□ -2.25
Trav3-4A0A075B654 Gm14785-201ENSMUST00000120185 539 ntBASIC1□□□□□ -2.25
Trav3-4A0A075B654 Gm12607-201ENSMUST00000120724 493 ntBASIC1□□□□□ -2.25
Trav3-4A0A075B654 Gm23221-201ENSMUST00000158118 93 ntBASIC1□□□□□ -2.25
Trav3-4A0A075B654 Gm25863-201ENSMUST00000158249 329 ntBASIC1□□□□□ -2.25
Trav3-4A0A075B654 Gm22665-201ENSMUST00000158720 275 ntBASIC1□□□□□ -2.25
Trav3-4A0A075B654 Gm24174-201ENSMUST00000158933 111 ntBASIC1□□□□□ -2.25
Trav3-4A0A075B654 Gm23860-201ENSMUST00000179446 132 ntBASIC1□□□□□ -2.25
Trav3-4A0A075B654 Mir6341-201ENSMUST00000183490 121 ntBASIC1□□□□□ -2.25
Trav3-4A0A075B654 Gm28825-201ENSMUST00000186233 238 ntBASIC1□□□□□ -2.25
Trav3-4A0A075B654 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1□□□□□ -2.25
Trav3-4A0A075B654 Gm28466-201ENSMUST00000190678 659 ntBASIC1□□□□□ -2.25
Trav3-4A0A075B654 Gm37771-201ENSMUST00000193121 265 ntBASIC1□□□□□ -2.25
Trav3-4A0A075B654 Gm17937-201ENSMUST00000197908 742 ntBASIC1□□□□□ -2.25
Trav3-4A0A075B654 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC1□□□□□ -2.25
Trav3-4A0A075B654 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC1□□□□□ -2.25
Trav3-4A0A075B654 AC172027.1-201ENSMUST00000217659 337 ntBASIC1□□□□□ -2.25
Trav3-4A0A075B654 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC1□□□□□ -2.25
Trav3-4A0A075B654 AC166830.1-201ENSMUST00000224201 533 ntBASIC1□□□□□ -2.25
Trav3-4A0A075B654 CT025538.2-201ENSMUST00000226083 772 ntBASIC1□□□□□ -2.25
Trav3-4A0A075B654 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
Trav3-4A0A075B654 Gm22443-201ENSMUST00000082890 107 ntBASIC1□□□□□ -2.25
Trav3-4A0A075B654 Snora3-201ENSMUST00000083082 132 ntBASIC1□□□□□ -2.25
Trav3-4A0A075B654 Mir92-2-201ENSMUST00000083679 91 ntBASIC1□□□□□ -2.25
Trav3-4A0A075B654 Gm44114-201ENSMUST00000203270 2727 ntBASIC1□□□□□ -2.25
Trav3-4A0A075B654 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC0.99□□□□□ -2.25
Trav3-4A0A075B654 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
Trav3-4A0A075B654 Gm26396-201ENSMUST00000104093 132 ntBASIC0.99□□□□□ -2.25
Trav3-4A0A075B654 Gm16021-201ENSMUST00000121176 219 ntBASIC0.99□□□□□ -2.25
Trav3-4A0A075B654 Gm25427-201ENSMUST00000157605 103 ntBASIC0.99□□□□□ -2.25
Trav3-4A0A075B654 Gm24854-201ENSMUST00000158025 98 ntBASIC0.99□□□□□ -2.25
Trav3-4A0A075B654 Gm24846-201ENSMUST00000158033 108 ntBASIC0.99□□□□□ -2.25
Trav3-4A0A075B654 Gm25066-201ENSMUST00000158145 123 ntBASIC0.99□□□□□ -2.25
Trav3-4A0A075B654 Gm23339-201ENSMUST00000158962 139 ntBASIC0.99□□□□□ -2.25
Trav3-4A0A075B654 Gm21171-201ENSMUST00000180048 673 ntBASIC0.99□□□□□ -2.25
Trav3-4A0A075B654 Gm27532-201ENSMUST00000183726 113 ntBASIC0.99□□□□□ -2.25
Trav3-4A0A075B654 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
Trav3-4A0A075B654 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
Trav3-4A0A075B654 Gm19891-201ENSMUST00000189771 303 ntBASIC0.99□□□□□ -2.25
Trav3-4A0A075B654 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC0.99□□□□□ -2.25
Trav3-4A0A075B654 Gm29389-201ENSMUST00000191562 352 ntBASIC0.99□□□□□ -2.25
Trav3-4A0A075B654 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC0.99□□□□□ -2.25
Trav3-4A0A075B654 Gm43402-201ENSMUST00000197159 159 ntBASIC0.99□□□□□ -2.25
Trav3-4A0A075B654 Gm19457-201ENSMUST00000200995 448 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms