Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Gm22417-201ENSMUST00000178656 94 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Snord116l2-201ENSMUST00000178675 94 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Gm26270-201ENSMUST00000178690 94 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Snord116l16-201ENSMUST00000178777 94 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Gm23313-201ENSMUST00000178931 94 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Snord116l17-201ENSMUST00000178936 94 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Gm23089-201ENSMUST00000178947 94 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Snord116l10-201ENSMUST00000179053 94 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Gm24153-201ENSMUST00000179280 94 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Gm25597-201ENSMUST00000179388 94 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Snord116l1-201ENSMUST00000179518 94 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Gm25816-201ENSMUST00000179764 94 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Snord116l8-201ENSMUST00000179889 94 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Snord116l7-201ENSMUST00000179895 94 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Snord116l5-201ENSMUST00000179927 94 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Snord116l6-201ENSMUST00000179955 94 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Gm26188-201ENSMUST00000179963 94 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Gm26433-201ENSMUST00000180227 94 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Snord116l11-201ENSMUST00000180312 94 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Gm22128-201ENSMUST00000180346 94 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Mir7578-201ENSMUST00000183455 82 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Gm37104-201ENSMUST00000193278 196 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Gm30341-201ENSMUST00000194363 289 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Gm18696-201ENSMUST00000220103 274 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Gm7422-201ENSMUST00000220115 640 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 CT571268.1-201ENSMUST00000222320 407 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 AC159619.2-201ENSMUST00000222924 401 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Gm24045-201ENSMUST00000083113 98 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Gm22970-201ENSMUST00000083304 186 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Gm10343-201ENSMUST00000096279 348 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Gm44049-201ENSMUST00000204905 2984 ntBASIC2.37□□□□□ -2.03
Trav1A0A075B5Z4 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC2.37□□□□□ -2.03
Trav1A0A075B5Z4 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC2.37□□□□□ -2.03
Trav1A0A075B5Z4 Gm22496-201ENSMUST00000104493 88 ntBASIC2.37□□□□□ -2.03
Trav1A0A075B5Z4 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Trav1A0A075B5Z4 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC2.37□□□□□ -2.03
Trav1A0A075B5Z4 Gm15223-201ENSMUST00000120989 826 ntBASIC2.37□□□□□ -2.03
Trav1A0A075B5Z4 Gm25220-201ENSMUST00000157546 95 ntBASIC2.37□□□□□ -2.03
Trav1A0A075B5Z4 Gm25490-201ENSMUST00000158734 130 ntBASIC2.37□□□□□ -2.03
Trav1A0A075B5Z4 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC2.37□□□□□ -2.03
Trav1A0A075B5Z4 Gm25175-201ENSMUST00000178712 79 ntBASIC2.37□□□□□ -2.03
Trav1A0A075B5Z4 Gm28755-201ENSMUST00000185773 199 ntBASIC2.37□□□□□ -2.03
Trav1A0A075B5Z4 Gm18291-201ENSMUST00000190791 301 ntBASIC2.37□□□□□ -2.03
Trav1A0A075B5Z4 Gm32447-201ENSMUST00000194265 697 ntBASIC2.37□□□□□ -2.03
Trav1A0A075B5Z4 Gm36953-201ENSMUST00000195295 268 ntBASIC2.37□□□□□ -2.03
Trav1A0A075B5Z4 Ighv12-1-201ENSMUST00000195542 329 ntBASIC2.37□□□□□ -2.03
Trav1A0A075B5Z4 Gm44465-201ENSMUST00000199536 114 ntBASIC2.37□□□□□ -2.03
Trav1A0A075B5Z4 Gm43367-201ENSMUST00000199986 625 ntBASIC2.37□□□□□ -2.03
Trav1A0A075B5Z4 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Trav1A0A075B5Z4 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.37□□□□□ -2.03
Trav1A0A075B5Z4 Gm43955-201ENSMUST00000204332 142 ntBASIC2.37□□□□□ -2.03
Trav1A0A075B5Z4 Gm5001-201ENSMUST00000204361 331 ntBASIC2.37□□□□□ -2.03
Trav1A0A075B5Z4 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC2.37□□□□□ -2.03
Trav1A0A075B5Z4 CT030187.1-201ENSMUST00000220605 252 ntBASIC2.37□□□□□ -2.03
Trav1A0A075B5Z4 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC2.37□□□□□ -2.03
Trav1A0A075B5Z4 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Trav1A0A075B5Z4 AC154262.1-201ENSMUST00000225976 286 ntBASIC2.37□□□□□ -2.03
Trav1A0A075B5Z4 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Trav1A0A075B5Z4 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Trav1A0A075B5Z4 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.37□□□□□ -2.03
Trav1A0A075B5Z4 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Trav1A0A075B5Z4 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC2.37□□□□□ -2.03
Trav1A0A075B5Z4 AC152159.1-201ENSMUST00000226719 2769 ntBASIC2.37□□□□□ -2.03
Trav1A0A075B5Z4 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
Trav1A0A075B5Z4 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
Trav1A0A075B5Z4 Gm15106-201ENSMUST00000119691 821 ntBASIC2.36□□□□□ -2.03
Trav1A0A075B5Z4 Gm16411-201ENSMUST00000122164 1100 ntBASIC2.36□□□□□ -2.03
Trav1A0A075B5Z4 Gm26027-201ENSMUST00000122725 268 ntBASIC2.36□□□□□ -2.03
Trav1A0A075B5Z4 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.36□□□□□ -2.03
Trav1A0A075B5Z4 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Trav1A0A075B5Z4 Gm3104-201ENSMUST00000171004 473 ntBASIC2.36□□□□□ -2.03
Trav1A0A075B5Z4 Mir5136-201ENSMUST00000175573 76 ntBASIC2.36□□□□□ -2.03
Trav1A0A075B5Z4 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC2.36□□□□□ -2.03
Trav1A0A075B5Z4 Gm43669-201ENSMUST00000198229 436 ntBASIC2.36□□□□□ -2.03
Trav1A0A075B5Z4 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC2.36□□□□□ -2.03
Trav1A0A075B5Z4 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC2.36□□□□□ -2.03
Trav1A0A075B5Z4 AC166358.10-201ENSMUST00000220556 144 ntBASIC2.36□□□□□ -2.03
Trav1A0A075B5Z4 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Trav1A0A075B5Z4 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Trav1A0A075B5Z4 Gm25856-201ENSMUST00000082786 75 ntBASIC2.36□□□□□ -2.03
Trav1A0A075B5Z4 Gm23515-201ENSMUST00000082829 107 ntBASIC2.36□□□□□ -2.03
Trav1A0A075B5Z4 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trav1A0A075B5Z4 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.36□□□□□ -2.03
Trav1A0A075B5Z4 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Trav1A0A075B5Z4 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Trav1A0A075B5Z4 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Trav1A0A075B5Z4 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Trav1A0A075B5Z4 Gm22834-201ENSMUST00000102021 79 ntBASIC2.35□□□□□ -2.03
Trav1A0A075B5Z4 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Trav1A0A075B5Z4 Gm15936-201ENSMUST00000118706 460 ntBASIC2.35□□□□□ -2.03
Trav1A0A075B5Z4 Gm6806-201ENSMUST00000120092 1006 ntBASIC2.35□□□□□ -2.03
Trav1A0A075B5Z4 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC2.35□□□□□ -2.03
Trav1A0A075B5Z4 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC2.35□□□□□ -2.03
Trav1A0A075B5Z4 Gm13443-201ENSMUST00000120770 555 ntBASIC2.35□□□□□ -2.03
Trav1A0A075B5Z4 Gm13901-201ENSMUST00000137252 468 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms