Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm17951-201ENSMUST00000198536 496 ntBASIC3.2□□□□□ -1.9
H2afb3S4R1G7 Gm42814-201ENSMUST00000199370 460 ntBASIC3.2□□□□□ -1.9
H2afb3S4R1G7 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.2□□□□□ -1.9
H2afb3S4R1G7 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC3.2□□□□□ -1.9
H2afb3S4R1G7 AC124772.1-201ENSMUST00000221325 151 ntBASIC3.2□□□□□ -1.9
H2afb3S4R1G7 Gm33654-201ENSMUST00000221704 215 ntBASIC3.2□□□□□ -1.9
H2afb3S4R1G7 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC3.2□□□□□ -1.9
H2afb3S4R1G7 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC3.2□□□□□ -1.9
H2afb3S4R1G7 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
H2afb3S4R1G7 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC3.2□□□□□ -1.9
H2afb3S4R1G7 Gm25205-201ENSMUST00000082841 103 ntBASIC3.2□□□□□ -1.9
H2afb3S4R1G7 Gm25793-201ENSMUST00000083287 107 ntBASIC3.2□□□□□ -1.9
H2afb3S4R1G7 Gm10343-201ENSMUST00000096279 348 ntBASIC3.2□□□□□ -1.9
H2afb3S4R1G7 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
H2afb3S4R1G7 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3.19□□□□□ -1.9
H2afb3S4R1G7 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
H2afb3S4R1G7 Gm13876-201ENSMUST00000118451 261 ntBASIC3.19□□□□□ -1.9
H2afb3S4R1G7 Gm11704-201ENSMUST00000120031 214 ntBASIC3.19□□□□□ -1.9
H2afb3S4R1G7 Gm25967-201ENSMUST00000157168 147 ntBASIC3.19□□□□□ -1.9
H2afb3S4R1G7 Gm25621-201ENSMUST00000157223 114 ntBASIC3.19□□□□□ -1.9
H2afb3S4R1G7 Gm22501-201ENSMUST00000158981 127 ntBASIC3.19□□□□□ -1.9
H2afb3S4R1G7 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.19□□□□□ -1.9
H2afb3S4R1G7 Mir713-201ENSMUST00000178651 108 ntBASIC3.19□□□□□ -1.9
H2afb3S4R1G7 Gm22448-201ENSMUST00000179254 107 ntBASIC3.19□□□□□ -1.9
H2afb3S4R1G7 Gm37001-201ENSMUST00000193377 190 ntBASIC3.19□□□□□ -1.9
H2afb3S4R1G7 Gm37791-201ENSMUST00000195081 286 ntBASIC3.19□□□□□ -1.9
H2afb3S4R1G7 Gm42621-201ENSMUST00000198114 275 ntBASIC3.19□□□□□ -1.9
H2afb3S4R1G7 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.19□□□□□ -1.9
H2afb3S4R1G7 AC165092.3-201ENSMUST00000223602 282 ntBASIC3.19□□□□□ -1.9
H2afb3S4R1G7 AC154576.2-202ENSMUST00000223916 688 ntBASIC3.19□□□□□ -1.9
H2afb3S4R1G7 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
H2afb3S4R1G7 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
H2afb3S4R1G7 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
H2afb3S4R1G7 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
H2afb3S4R1G7 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
H2afb3S4R1G7 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
H2afb3S4R1G7 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.19□□□□□ -1.9
H2afb3S4R1G7 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.19□□□□□ -1.9
H2afb3S4R1G7 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.18□□□□□ -1.9
H2afb3S4R1G7 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
H2afb3S4R1G7 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
H2afb3S4R1G7 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
H2afb3S4R1G7 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
H2afb3S4R1G7 Mir687-201ENSMUST00000102166 89 ntBASIC3.18□□□□□ -1.9
H2afb3S4R1G7 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
H2afb3S4R1G7 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
H2afb3S4R1G7 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
H2afb3S4R1G7 Gm22493-201ENSMUST00000104494 132 ntBASIC3.18□□□□□ -1.9
H2afb3S4R1G7 Gm11384-201ENSMUST00000121376 303 ntBASIC3.18□□□□□ -1.9
H2afb3S4R1G7 Gm22204-201ENSMUST00000122654 327 ntBASIC3.18□□□□□ -1.9
H2afb3S4R1G7 Gm8289-201ENSMUST00000144814 1182 ntBASIC3.18□□□□□ -1.9
H2afb3S4R1G7 Gm23098-201ENSMUST00000157552 299 ntBASIC3.18□□□□□ -1.9
H2afb3S4R1G7 Gm27510-201ENSMUST00000158214 64 ntBASIC3.18□□□□□ -1.9
H2afb3S4R1G7 Gm25605-201ENSMUST00000158364 124 ntBASIC3.18□□□□□ -1.9
H2afb3S4R1G7 Gm24552-201ENSMUST00000158646 103 ntBASIC3.18□□□□□ -1.9
H2afb3S4R1G7 Gm25369-201ENSMUST00000158848 132 ntBASIC3.18□□□□□ -1.9
H2afb3S4R1G7 Gm20399-201ENSMUST00000174652 132 ntBASIC3.18□□□□□ -1.9
H2afb3S4R1G7 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC3.18□□□□□ -1.9
H2afb3S4R1G7 Gm22263-201ENSMUST00000180060 104 ntBASIC3.18□□□□□ -1.9
H2afb3S4R1G7 Gm27410-201ENSMUST00000183851 115 ntBASIC3.18□□□□□ -1.9
H2afb3S4R1G7 Gm27402-201ENSMUST00000183890 120 ntBASIC3.18□□□□□ -1.9
H2afb3S4R1G7 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
H2afb3S4R1G7 Gm29397-201ENSMUST00000185205 333 ntBASIC3.18□□□□□ -1.9
H2afb3S4R1G7 Gm29192-201ENSMUST00000190942 377 ntBASIC3.18□□□□□ -1.9
H2afb3S4R1G7 Gm8242-202ENSMUST00000193056 475 ntBASIC3.18□□□□□ -1.9
H2afb3S4R1G7 Gm43604-201ENSMUST00000199799 705 ntBASIC3.18□□□□□ -1.9
H2afb3S4R1G7 Gm45395-201ENSMUST00000209891 559 ntBASIC3.18□□□□□ -1.9
H2afb3S4R1G7 AL606472.1-201ENSMUST00000224628 275 ntBASIC3.18□□□□□ -1.9
H2afb3S4R1G7 AC154271.1-201ENSMUST00000224780 383 ntBASIC3.18□□□□□ -1.9
H2afb3S4R1G7 Gm25147-201ENSMUST00000083030 105 ntBASIC3.18□□□□□ -1.9
H2afb3S4R1G7 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
H2afb3S4R1G7 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.18□□□□□ -1.9
H2afb3S4R1G7 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
H2afb3S4R1G7 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
H2afb3S4R1G7 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
H2afb3S4R1G7 Gm43047-201ENSMUST00000200089 3460 ntBASIC3.17□□□□□ -1.9
H2afb3S4R1G7 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
H2afb3S4R1G7 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
H2afb3S4R1G7 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.17□□□□□ -1.9
H2afb3S4R1G7 Gm16005-201ENSMUST00000120515 269 ntBASIC3.17□□□□□ -1.9
H2afb3S4R1G7 Gm11456-201ENSMUST00000121070 256 ntBASIC3.17□□□□□ -1.9
H2afb3S4R1G7 Gm12785-201ENSMUST00000122052 172 ntBASIC3.17□□□□□ -1.9
H2afb3S4R1G7 Gm22613-201ENSMUST00000122679 292 ntBASIC3.17□□□□□ -1.9
H2afb3S4R1G7 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.17□□□□□ -1.9
H2afb3S4R1G7 Gm23592-201ENSMUST00000157859 117 ntBASIC3.17□□□□□ -1.9
H2afb3S4R1G7 Gm22726-201ENSMUST00000158089 179 ntBASIC3.17□□□□□ -1.9
H2afb3S4R1G7 Gm24729-201ENSMUST00000158225 137 ntBASIC3.17□□□□□ -1.9
H2afb3S4R1G7 Gm23112-201ENSMUST00000158606 125 ntBASIC3.17□□□□□ -1.9
H2afb3S4R1G7 Gm10357-201ENSMUST00000159886 264 ntBASIC3.17□□□□□ -1.9
H2afb3S4R1G7 Gm27903-201ENSMUST00000175482 126 ntBASIC3.17□□□□□ -1.9
H2afb3S4R1G7 Gm22120-201ENSMUST00000175590 70 ntBASIC3.17□□□□□ -1.9
H2afb3S4R1G7 Gm22621-201ENSMUST00000179678 74 ntBASIC3.17□□□□□ -1.9
H2afb3S4R1G7 Mir7031-201ENSMUST00000183860 65 ntBASIC3.17□□□□□ -1.9
H2afb3S4R1G7 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC3.17□□□□□ -1.9
H2afb3S4R1G7 Gm20257-202ENSMUST00000188643 130 ntBASIC3.17□□□□□ -1.9
H2afb3S4R1G7 Gm20203-201ENSMUST00000192352 332 ntBASIC3.17□□□□□ -1.9
H2afb3S4R1G7 Gm37431-201ENSMUST00000195102 111 ntBASIC3.17□□□□□ -1.9
H2afb3S4R1G7 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC3.17□□□□□ -1.9
H2afb3S4R1G7 Gm2710-201ENSMUST00000073196 603 ntBASIC3.17□□□□□ -1.9
H2afb3S4R1G7 Gm23451-201ENSMUST00000083328 122 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms