Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm21916-201ENSMUST00000178771 498 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm21801-201ENSMUST00000178865 498 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm21633-201ENSMUST00000178941 498 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm21821-201ENSMUST00000179646 498 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm21588-201ENSMUST00000180074 498 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm21780-201ENSMUST00000180128 498 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm21572-201ENSMUST00000180134 498 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm21529-201ENSMUST00000180175 498 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm27245-201ENSMUST00000184385 376 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm27490-201ENSMUST00000184754 128 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Mir7028-201ENSMUST00000185016 64 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm29134-201ENSMUST00000186579 126 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm29370-202ENSMUST00000187476 499 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm28337-201ENSMUST00000190425 666 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm37455-201ENSMUST00000191993 529 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm36866-201ENSMUST00000193343 657 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm36047-201ENSMUST00000193659 657 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm20857-201ENSMUST00000194766 657 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm20858-201ENSMUST00000195459 657 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Ighv12-1-201ENSMUST00000195542 329 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Igkv15-97-201ENSMUST00000197637 339 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm44157-201ENSMUST00000204720 410 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm45687-201ENSMUST00000209454 155 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 AL603630.1-201ENSMUST00000214781 147 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 AC183096.1-201ENSMUST00000226392 130 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 AC144628.2-201ENSMUST00000227374 352 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
H2afb1S4R1E0 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
H2afb1S4R1E0 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
H2afb1S4R1E0 Gm22676-201ENSMUST00000116972 129 ntBASIC2.61□□□□□ -1.99
H2afb1S4R1E0 Gm14197-201ENSMUST00000117480 1049 ntBASIC2.61□□□□□ -1.99
H2afb1S4R1E0 Gm14069-201ENSMUST00000120815 229 ntBASIC2.61□□□□□ -1.99
H2afb1S4R1E0 Gm11834-201ENSMUST00000122257 585 ntBASIC2.61□□□□□ -1.99
H2afb1S4R1E0 Gm25107-201ENSMUST00000122472 129 ntBASIC2.61□□□□□ -1.99
H2afb1S4R1E0 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC2.61□□□□□ -1.99
H2afb1S4R1E0 Gm25220-201ENSMUST00000157546 95 ntBASIC2.61□□□□□ -1.99
H2afb1S4R1E0 Gm25335-201ENSMUST00000158043 103 ntBASIC2.61□□□□□ -1.99
H2afb1S4R1E0 Gm23016-201ENSMUST00000158431 62 ntBASIC2.61□□□□□ -1.99
H2afb1S4R1E0 Gm17065-201ENSMUST00000165245 239 ntBASIC2.61□□□□□ -1.99
H2afb1S4R1E0 Gm28647-201ENSMUST00000188416 197 ntBASIC2.61□□□□□ -1.99
H2afb1S4R1E0 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC2.61□□□□□ -1.99
H2afb1S4R1E0 Gm36776-201ENSMUST00000207006 203 ntBASIC2.61□□□□□ -1.99
H2afb1S4R1E0 Gm44824-201ENSMUST00000207021 229 ntBASIC2.61□□□□□ -1.99
H2afb1S4R1E0 Gm34783-201ENSMUST00000209159 303 ntBASIC2.61□□□□□ -1.99
H2afb1S4R1E0 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC2.61□□□□□ -1.99
H2afb1S4R1E0 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC2.61□□□□□ -1.99
H2afb1S4R1E0 AC117656.1-201ENSMUST00000225826 339 ntBASIC2.61□□□□□ -1.99
H2afb1S4R1E0 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.61□□□□□ -1.99
H2afb1S4R1E0 Gm23096-201ENSMUST00000083447 107 ntBASIC2.61□□□□□ -1.99
H2afb1S4R1E0 Mir27a-201ENSMUST00000083510 87 ntBASIC2.61□□□□□ -1.99
H2afb1S4R1E0 Gm15084-201ENSMUST00000178585 1502 ntBASIC2.61□□□□□ -1.99
H2afb1S4R1E0 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
H2afb1S4R1E0 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.61□□□□□ -1.99
H2afb1S4R1E0 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
H2afb1S4R1E0 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.6□□□□□ -1.99
H2afb1S4R1E0 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
H2afb1S4R1E0 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
H2afb1S4R1E0 Gm12787-201ENSMUST00000119234 396 ntBASIC2.6□□□□□ -1.99
H2afb1S4R1E0 Gm5287-201ENSMUST00000120666 598 ntBASIC2.6□□□□□ -1.99
H2afb1S4R1E0 Gm22611-201ENSMUST00000158288 150 ntBASIC2.6□□□□□ -1.99
H2afb1S4R1E0 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC2.6□□□□□ -1.99
H2afb1S4R1E0 Gm24518-201ENSMUST00000180275 94 ntBASIC2.6□□□□□ -1.99
H2afb1S4R1E0 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
H2afb1S4R1E0 Mir8106-201ENSMUST00000184520 139 ntBASIC2.6□□□□□ -1.99
H2afb1S4R1E0 Mir6383-201ENSMUST00000184545 116 ntBASIC2.6□□□□□ -1.99
H2afb1S4R1E0 Gm27520-201ENSMUST00000184872 81 ntBASIC2.6□□□□□ -1.99
H2afb1S4R1E0 Gm28744-201ENSMUST00000189939 340 ntBASIC2.6□□□□□ -1.99
H2afb1S4R1E0 Igkv13-64-201ENSMUST00000198143 343 ntBASIC2.6□□□□□ -1.99
H2afb1S4R1E0 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
H2afb1S4R1E0 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.6□□□□□ -1.99
H2afb1S4R1E0 Gm44657-201ENSMUST00000208568 450 ntBASIC2.6□□□□□ -1.99
H2afb1S4R1E0 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC2.6□□□□□ -1.99
H2afb1S4R1E0 Gm19140-201ENSMUST00000209790 421 ntBASIC2.6□□□□□ -1.99
H2afb1S4R1E0 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
H2afb1S4R1E0 Gm18696-201ENSMUST00000220103 274 ntBASIC2.6□□□□□ -1.99
H2afb1S4R1E0 AC116465.1-201ENSMUST00000220324 235 ntBASIC2.6□□□□□ -1.99
H2afb1S4R1E0 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
H2afb1S4R1E0 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
H2afb1S4R1E0 Gm20172-201ENSMUST00000193138 1551 ntBASIC2.6□□□□□ -1.99
H2afb1S4R1E0 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
H2afb1S4R1E0 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
H2afb1S4R1E0 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
H2afb1S4R1E0 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
H2afb1S4R1E0 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
H2afb1S4R1E0 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
H2afb1S4R1E0 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
H2afb1S4R1E0 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
H2afb1S4R1E0 Gm23422-201ENSMUST00000102000 107 ntBASIC2.59□□□□□ -1.99
H2afb1S4R1E0 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
H2afb1S4R1E0 Gm13343-201ENSMUST00000116474 105 ntBASIC2.59□□□□□ -1.99
H2afb1S4R1E0 Gm23987-201ENSMUST00000117039 129 ntBASIC2.59□□□□□ -1.99
H2afb1S4R1E0 Gm12386-201ENSMUST00000117380 688 ntBASIC2.59□□□□□ -1.99
H2afb1S4R1E0 Gm13331-201ENSMUST00000117500 448 ntBASIC2.59□□□□□ -1.99
H2afb1S4R1E0 Gm25621-201ENSMUST00000157223 114 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms