Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm14910-201ENSMUST00000121037 1805 ntBASIC1.23□□□□□ -2.21
Scn11aQ9R053 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Scn11aQ9R053 Gm16331-201ENSMUST00000144274 498 ntBASIC1.23□□□□□ -2.21
Scn11aQ9R053 Gm23278-201ENSMUST00000157911 143 ntBASIC1.23□□□□□ -2.21
Scn11aQ9R053 Gm27477-201ENSMUST00000184649 143 ntBASIC1.23□□□□□ -2.21
Scn11aQ9R053 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
Scn11aQ9R053 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC1.23□□□□□ -2.21
Scn11aQ9R053 Mir93-201ENSMUST00000083593 88 ntBASIC1.23□□□□□ -2.21
Scn11aQ9R053 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Scn11aQ9R053 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
Scn11aQ9R053 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC1.23□□□□□ -2.21
Scn11aQ9R053 Gm24555-201ENSMUST00000104548 124 ntBASIC1.22□□□□□ -2.21
Scn11aQ9R053 Gm5958-201ENSMUST00000147698 297 ntBASIC1.22□□□□□ -2.21
Scn11aQ9R053 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.22□□□□□ -2.21
Scn11aQ9R053 Gm24772-201ENSMUST00000158507 110 ntBASIC1.22□□□□□ -2.21
Scn11aQ9R053 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Scn11aQ9R053 Gm29603-201ENSMUST00000186792 334 ntBASIC1.22□□□□□ -2.21
Scn11aQ9R053 Trbv6-201ENSMUST00000193743 276 ntBASIC1.22□□□□□ -2.21
Scn11aQ9R053 Gm6109-201ENSMUST00000223297 348 ntBASIC1.22□□□□□ -2.21
Scn11aQ9R053 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC1.22□□□□□ -2.21
Scn11aQ9R053 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Scn11aQ9R053 Gm23517-201ENSMUST00000082830 192 ntBASIC1.22□□□□□ -2.21
Scn11aQ9R053 Mir669f-201ENSMUST00000103850 121 ntBASIC1.21□□□□□ -2.22
Scn11aQ9R053 Gm14748-201ENSMUST00000119819 411 ntBASIC1.21□□□□□ -2.22
Scn11aQ9R053 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC1.21□□□□□ -2.22
Scn11aQ9R053 Gm13903-201ENSMUST00000120945 193 ntBASIC1.21□□□□□ -2.22
Scn11aQ9R053 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC1.21□□□□□ -2.22
Scn11aQ9R053 Gm44520-201ENSMUST00000205447 802 ntBASIC1.21□□□□□ -2.22
Scn11aQ9R053 AC163357.1-201ENSMUST00000220847 233 ntBASIC1.21□□□□□ -2.22
Scn11aQ9R053 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
Scn11aQ9R053 Gm15215-201ENSMUST00000117773 489 ntBASIC1.21□□□□□ -2.22
Scn11aQ9R053 Gm26089-201ENSMUST00000157898 107 ntBASIC1.21□□□□□ -2.22
Scn11aQ9R053 Gm26363-201ENSMUST00000158866 83 ntBASIC1.21□□□□□ -2.22
Scn11aQ9R053 Gm2930-201ENSMUST00000170403 474 ntBASIC1.21□□□□□ -2.22
Scn11aQ9R053 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Scn11aQ9R053 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Scn11aQ9R053 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Scn11aQ9R053 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.2□□□□□ -2.22
Scn11aQ9R053 Gm14833-201ENSMUST00000118345 1027 ntBASIC1.2□□□□□ -2.22
Scn11aQ9R053 Gm15147-201ENSMUST00000122263 483 ntBASIC1.2□□□□□ -2.22
Scn11aQ9R053 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.2□□□□□ -2.22
Scn11aQ9R053 Gm25368-201ENSMUST00000158847 131 ntBASIC1.2□□□□□ -2.22
Scn11aQ9R053 Mir6380-201ENSMUST00000184334 81 ntBASIC1.2□□□□□ -2.22
Scn11aQ9R053 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC1.2□□□□□ -2.22
Scn11aQ9R053 Gm19599-201ENSMUST00000218898 358 ntBASIC1.2□□□□□ -2.22
Scn11aQ9R053 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Scn11aQ9R053 Gm11359-201ENSMUST00000120039 567 ntBASIC1.19□□□□□ -2.22
Scn11aQ9R053 Gm12155-201ENSMUST00000121267 160 ntBASIC1.19□□□□□ -2.22
Scn11aQ9R053 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
Scn11aQ9R053 Gm45116-201ENSMUST00000207392 275 ntBASIC1.19□□□□□ -2.22
Scn11aQ9R053 Gm45375-201ENSMUST00000210338 280 ntBASIC1.19□□□□□ -2.22
Scn11aQ9R053 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.19□□□□□ -2.22
Scn11aQ9R053 AC137950.3-201ENSMUST00000228250 246 ntBASIC1.19□□□□□ -2.22
Scn11aQ9R053 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.19□□□□□ -2.22
Scn11aQ9R053 Gm14128-201ENSMUST00000119514 1011 ntBASIC1.19□□□□□ -2.22
Scn11aQ9R053 Gm22315-201ENSMUST00000158010 143 ntBASIC1.19□□□□□ -2.22
Scn11aQ9R053 Gm42774-201ENSMUST00000198854 283 ntBASIC1.19□□□□□ -2.22
Scn11aQ9R053 Gm44332-201ENSMUST00000203712 433 ntBASIC1.19□□□□□ -2.22
Scn11aQ9R053 Gm44446-201ENSMUST00000204864 255 ntBASIC1.19□□□□□ -2.22
Scn11aQ9R053 Gm44585-201ENSMUST00000207150 607 ntBASIC1.19□□□□□ -2.22
Scn11aQ9R053 AC132384.9-201ENSMUST00000218085 277 ntBASIC1.19□□□□□ -2.22
Scn11aQ9R053 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Scn11aQ9R053 Gm22862-201ENSMUST00000178593 121 ntBASIC1.18□□□□□ -2.22
Scn11aQ9R053 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC1.18□□□□□ -2.22
Scn11aQ9R053 Gm21064-202ENSMUST00000190583 278 ntBASIC1.18□□□□□ -2.22
Scn11aQ9R053 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC1.18□□□□□ -2.22
Scn11aQ9R053 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.18□□□□□ -2.22
Scn11aQ9R053 Gm9402-201ENSMUST00000196849 388 ntBASIC1.18□□□□□ -2.22
Scn11aQ9R053 Gm8041-201ENSMUST00000199755 616 ntBASIC1.18□□□□□ -2.22
Scn11aQ9R053 Gm44720-201ENSMUST00000206076 260 ntBASIC1.18□□□□□ -2.22
Scn11aQ9R053 Gm8219-201ENSMUST00000218309 242 ntBASIC1.18□□□□□ -2.22
Scn11aQ9R053 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC1.17□□□□□ -2.22
Scn11aQ9R053 Gm22048-201ENSMUST00000104721 89 ntBASIC1.17□□□□□ -2.22
Scn11aQ9R053 Gm14879-201ENSMUST00000117308 507 ntBASIC1.17□□□□□ -2.22
Scn11aQ9R053 Gm21990-201ENSMUST00000124692 383 ntBASIC1.17□□□□□ -2.22
Scn11aQ9R053 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Scn11aQ9R053 Gm24965-201ENSMUST00000157922 106 ntBASIC1.17□□□□□ -2.22
Scn11aQ9R053 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Scn11aQ9R053 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Scn11aQ9R053 Gm11392-201ENSMUST00000181419 710 ntBASIC1.17□□□□□ -2.22
Scn11aQ9R053 Gm29550-201ENSMUST00000185543 285 ntBASIC1.17□□□□□ -2.22
Scn11aQ9R053 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC1.17□□□□□ -2.22
Scn11aQ9R053 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC1.17□□□□□ -2.22
Scn11aQ9R053 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC1.17□□□□□ -2.22
Scn11aQ9R053 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Scn11aQ9R053 Gm26176-201ENSMUST00000083795 105 ntBASIC1.17□□□□□ -2.22
Scn11aQ9R053 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Scn11aQ9R053 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.17□□□□□ -2.22
Scn11aQ9R053 Gm12313-201ENSMUST00000121347 421 ntBASIC1.16□□□□□ -2.22
Scn11aQ9R053 Gm15281-201ENSMUST00000125181 351 ntBASIC1.16□□□□□ -2.22
Scn11aQ9R053 Gm15275-201ENSMUST00000154752 347 ntBASIC1.16□□□□□ -2.22
Scn11aQ9R053 Gm25454-201ENSMUST00000157947 315 ntBASIC1.16□□□□□ -2.22
Scn11aQ9R053 Gm17038-201ENSMUST00000166586 494 ntBASIC1.16□□□□□ -2.22
Scn11aQ9R053 Gm9373-201ENSMUST00000208724 599 ntBASIC1.16□□□□□ -2.22
Scn11aQ9R053 Gm18338-201ENSMUST00000222381 560 ntBASIC1.16□□□□□ -2.22
Scn11aQ9R053 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC1.16□□□□□ -2.22
Scn11aQ9R053 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Scn11aQ9R053 Gm25541-201ENSMUST00000116888 126 ntBASIC1.16□□□□□ -2.22
Scn11aQ9R053 Gm12327-201ENSMUST00000121729 1168 ntBASIC1.16□□□□□ -2.22
Scn11aQ9R053 Gm25220-201ENSMUST00000157546 95 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 186.8 ms