Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Shroom3Q9QXN0 Gm27579-201ENSMUST00000158113 63 ntBASIC3.2□□□□□ -1.9
Shroom3Q9QXN0 Gm23179-201ENSMUST00000158693 304 ntBASIC3.2□□□□□ -1.9
Shroom3Q9QXN0 Mir6418-201ENSMUST00000185075 115 ntBASIC3.2□□□□□ -1.9
Shroom3Q9QXN0 Gm38356-201ENSMUST00000194313 408 ntBASIC3.2□□□□□ -1.9
Shroom3Q9QXN0 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC3.2□□□□□ -1.9
Shroom3Q9QXN0 AC123618.1-201ENSMUST00000220174 360 ntBASIC3.2□□□□□ -1.9
Shroom3Q9QXN0 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Shroom3Q9QXN0 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.19□□□□□ -1.9
Shroom3Q9QXN0 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
Shroom3Q9QXN0 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.19□□□□□ -1.9
Shroom3Q9QXN0 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.19□□□□□ -1.9
Shroom3Q9QXN0 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Shroom3Q9QXN0 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.19□□□□□ -1.9
Shroom3Q9QXN0 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Shroom3Q9QXN0 Gm13378-201ENSMUST00000117483 336 ntBASIC3.19□□□□□ -1.9
Shroom3Q9QXN0 Gm22956-201ENSMUST00000122520 80 ntBASIC3.19□□□□□ -1.9
Shroom3Q9QXN0 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC3.19□□□□□ -1.9
Shroom3Q9QXN0 Gm6956-201ENSMUST00000134724 546 ntBASIC3.19□□□□□ -1.9
Shroom3Q9QXN0 Gm24784-201ENSMUST00000157640 62 ntBASIC3.19□□□□□ -1.9
Shroom3Q9QXN0 Mir3964-201ENSMUST00000174898 74 ntBASIC3.19□□□□□ -1.9
Shroom3Q9QXN0 Gm26061-201ENSMUST00000175584 108 ntBASIC3.19□□□□□ -1.9
Shroom3Q9QXN0 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC3.19□□□□□ -1.9
Shroom3Q9QXN0 Gm26622-201ENSMUST00000180520 298 ntBASIC3.19□□□□□ -1.9
Shroom3Q9QXN0 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC3.19□□□□□ -1.9
Shroom3Q9QXN0 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC3.19□□□□□ -1.9
Shroom3Q9QXN0 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Shroom3Q9QXN0 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Shroom3Q9QXN0 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Shroom3Q9QXN0 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Shroom3Q9QXN0 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.19□□□□□ -1.9
Shroom3Q9QXN0 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Shroom3Q9QXN0 Gm15102-201ENSMUST00000118740 1502 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm14591-201ENSMUST00000120407 518 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm26101-201ENSMUST00000157246 105 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm22378-201ENSMUST00000157481 111 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm23078-201ENSMUST00000157848 148 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm22532-201ENSMUST00000158822 140 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm18520-201ENSMUST00000174783 658 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm21842-201ENSMUST00000177552 498 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm21626-201ENSMUST00000177791 498 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm21562-201ENSMUST00000177888 498 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm21539-201ENSMUST00000177925 498 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm21599-201ENSMUST00000178249 498 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm21914-201ENSMUST00000178452 498 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm21723-201ENSMUST00000178692 498 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm21916-201ENSMUST00000178771 498 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm21801-201ENSMUST00000178865 498 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm21633-201ENSMUST00000178941 498 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm21821-201ENSMUST00000179646 498 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm21588-201ENSMUST00000180074 498 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm21780-201ENSMUST00000180128 498 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm21572-201ENSMUST00000180134 498 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm21529-201ENSMUST00000180175 498 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm28399-201ENSMUST00000186221 318 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm28572-201ENSMUST00000187444 318 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm29370-202ENSMUST00000187476 499 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm29365-201ENSMUST00000189461 699 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm29475-201ENSMUST00000190767 312 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm28872-201ENSMUST00000191518 158 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm9343-201ENSMUST00000209016 2609 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 AC124346.1-201ENSMUST00000218539 364 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm18921-201ENSMUST00000221798 366 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 AC118639.1-201ENSMUST00000227204 338 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm37393-201ENSMUST00000195118 3870 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm43326-201ENSMUST00000198459 1638 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm13518-201ENSMUST00000120018 233 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm14977-201ENSMUST00000121626 812 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm5123-201ENSMUST00000121905 837 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm5755-201ENSMUST00000152394 837 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm23169-201ENSMUST00000157157 112 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm24060-201ENSMUST00000157494 95 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm24409-201ENSMUST00000157881 152 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm22348-201ENSMUST00000178674 79 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm22263-201ENSMUST00000180060 104 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Mir6355-201ENSMUST00000183687 106 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm29218-205ENSMUST00000190846 615 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 AC160863.1-201ENSMUST00000218412 317 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Gm26129-201ENSMUST00000082719 107 ntBASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
Shroom3Q9QXN0 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Shroom3Q9QXN0 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Shroom3Q9QXN0 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Shroom3Q9QXN0 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Shroom3Q9QXN0 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Shroom3Q9QXN0 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC3.17□□□□□ -1.9
Shroom3Q9QXN0 Gm26027-201ENSMUST00000122725 268 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms