Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm38238-201ENSMUST00000194334 346 ntBASIC2.11□□□□□ -2.07
Trem1Q9JKE2 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC2.11□□□□□ -2.07
Trem1Q9JKE2 Gm18658-201ENSMUST00000195558 270 ntBASIC2.11□□□□□ -2.07
Trem1Q9JKE2 Gm37119-201ENSMUST00000195691 389 ntBASIC2.11□□□□□ -2.07
Trem1Q9JKE2 Gm42805-201ENSMUST00000196158 276 ntBASIC2.11□□□□□ -2.07
Trem1Q9JKE2 Gm24350-202ENSMUST00000198309 132 ntBASIC2.11□□□□□ -2.07
Trem1Q9JKE2 Gm42739-201ENSMUST00000200687 226 ntBASIC2.11□□□□□ -2.07
Trem1Q9JKE2 Gm45678-201ENSMUST00000210509 295 ntBASIC2.11□□□□□ -2.07
Trem1Q9JKE2 Gm9370-201ENSMUST00000222787 609 ntBASIC2.11□□□□□ -2.07
Trem1Q9JKE2 AC115289.1-201ENSMUST00000224915 522 ntBASIC2.11□□□□□ -2.07
Trem1Q9JKE2 AC154506.3-201ENSMUST00000225417 213 ntBASIC2.11□□□□□ -2.07
Trem1Q9JKE2 AC154252.1-201ENSMUST00000226041 473 ntBASIC2.11□□□□□ -2.07
Trem1Q9JKE2 Gm10298-201ENSMUST00000074801 265 ntBASIC2.11□□□□□ -2.07
Trem1Q9JKE2 n-R5s166-201ENSMUST00000082898 121 ntBASIC2.11□□□□□ -2.07
Trem1Q9JKE2 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Trem1Q9JKE2 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.11□□□□□ -2.07
Trem1Q9JKE2 Gm26002-201ENSMUST00000101915 107 ntBASIC2.1□□□□□ -2.07
Trem1Q9JKE2 Gm12235-201ENSMUST00000118596 170 ntBASIC2.1□□□□□ -2.07
Trem1Q9JKE2 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Trem1Q9JKE2 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Trem1Q9JKE2 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Trem1Q9JKE2 Mir6370-201ENSMUST00000183510 120 ntBASIC2.1□□□□□ -2.07
Trem1Q9JKE2 Mir6335-201ENSMUST00000184081 98 ntBASIC2.1□□□□□ -2.07
Trem1Q9JKE2 Gm28283-201ENSMUST00000185509 178 ntBASIC2.1□□□□□ -2.07
Trem1Q9JKE2 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
Trem1Q9JKE2 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC2.1□□□□□ -2.07
Trem1Q9JKE2 Gm43992-201ENSMUST00000204358 197 ntBASIC2.1□□□□□ -2.07
Trem1Q9JKE2 Gm44825-201ENSMUST00000207557 150 ntBASIC2.1□□□□□ -2.07
Trem1Q9JKE2 Gm44598-201ENSMUST00000207566 150 ntBASIC2.1□□□□□ -2.07
Trem1Q9JKE2 Gm45879-201ENSMUST00000212521 392 ntBASIC2.1□□□□□ -2.07
Trem1Q9JKE2 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC2.1□□□□□ -2.07
Trem1Q9JKE2 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.1□□□□□ -2.07
Trem1Q9JKE2 AC141642.1-201ENSMUST00000220598 229 ntBASIC2.1□□□□□ -2.07
Trem1Q9JKE2 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.1□□□□□ -2.07
Trem1Q9JKE2 Gm24661-201ENSMUST00000083205 104 ntBASIC2.1□□□□□ -2.07
Trem1Q9JKE2 Gm23246-201ENSMUST00000083371 67 ntBASIC2.1□□□□□ -2.07
Trem1Q9JKE2 Mir300-201ENSMUST00000083485 79 ntBASIC2.1□□□□□ -2.07
Trem1Q9JKE2 Gm23040-201ENSMUST00000083869 163 ntBASIC2.1□□□□□ -2.07
Trem1Q9JKE2 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Trem1Q9JKE2 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.1□□□□□ -2.07
Trem1Q9JKE2 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Trem1Q9JKE2 Gm14429-201ENSMUST00000121881 2024 ntBASIC2.1□□□□□ -2.07
Trem1Q9JKE2 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.07
Trem1Q9JKE2 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Trem1Q9JKE2 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Trem1Q9JKE2 Gm25563-201ENSMUST00000104603 74 ntBASIC2.09□□□□□ -2.07
Trem1Q9JKE2 Gm14932-201ENSMUST00000117112 453 ntBASIC2.09□□□□□ -2.07
Trem1Q9JKE2 Gm12646-201ENSMUST00000119144 238 ntBASIC2.09□□□□□ -2.07
Trem1Q9JKE2 Gm12755-201ENSMUST00000122297 282 ntBASIC2.09□□□□□ -2.07
Trem1Q9JKE2 Gm23118-201ENSMUST00000122657 187 ntBASIC2.09□□□□□ -2.07
Trem1Q9JKE2 Gm24784-201ENSMUST00000157640 62 ntBASIC2.09□□□□□ -2.07
Trem1Q9JKE2 Gm24314-201ENSMUST00000158274 123 ntBASIC2.09□□□□□ -2.07
Trem1Q9JKE2 Gm24553-201ENSMUST00000158653 131 ntBASIC2.09□□□□□ -2.07
Trem1Q9JKE2 Ear-ps8-201ENSMUST00000161935 354 ntBASIC2.09□□□□□ -2.07
Trem1Q9JKE2 Gm25243-201ENSMUST00000174912 207 ntBASIC2.09□□□□□ -2.07
Trem1Q9JKE2 Gm8532-201ENSMUST00000179174 461 ntBASIC2.09□□□□□ -2.07
Trem1Q9JKE2 Gm28637-201ENSMUST00000179424 345 ntBASIC2.09□□□□□ -2.07
Trem1Q9JKE2 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC2.09□□□□□ -2.07
Trem1Q9JKE2 Gm9973-202ENSMUST00000220926 166 ntBASIC2.09□□□□□ -2.07
Trem1Q9JKE2 AC140477.1-201ENSMUST00000222354 246 ntBASIC2.09□□□□□ -2.07
Trem1Q9JKE2 AC183096.1-201ENSMUST00000226392 130 ntBASIC2.09□□□□□ -2.07
Trem1Q9JKE2 AC156574.2-201ENSMUST00000228023 282 ntBASIC2.09□□□□□ -2.07
Trem1Q9JKE2 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Trem1Q9JKE2 Snora69-201ENSMUST00000083708 131 ntBASIC2.09□□□□□ -2.07
Trem1Q9JKE2 Gm25628-201ENSMUST00000084002 105 ntBASIC2.09□□□□□ -2.07
Trem1Q9JKE2 Olfr575-201ENSMUST00000084812 957 ntBASIC2.09□□□□□ -2.07
Trem1Q9JKE2 Gm26327-201ENSMUST00000093724 111 ntBASIC2.09□□□□□ -2.07
Trem1Q9JKE2 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Trem1Q9JKE2 Gm24984-201ENSMUST00000104454 133 ntBASIC2.08□□□□□ -2.08
Trem1Q9JKE2 Gm22091-201ENSMUST00000116908 127 ntBASIC2.08□□□□□ -2.08
Trem1Q9JKE2 Gm25335-201ENSMUST00000158043 103 ntBASIC2.08□□□□□ -2.08
Trem1Q9JKE2 Gm25711-201ENSMUST00000158633 128 ntBASIC2.08□□□□□ -2.08
Trem1Q9JKE2 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Trem1Q9JKE2 Gm21885-201ENSMUST00000178891 327 ntBASIC2.08□□□□□ -2.08
Trem1Q9JKE2 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC2.08□□□□□ -2.08
Trem1Q9JKE2 Gm37807-201ENSMUST00000194310 190 ntBASIC2.08□□□□□ -2.08
Trem1Q9JKE2 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC2.08□□□□□ -2.08
Trem1Q9JKE2 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC2.08□□□□□ -2.08
Trem1Q9JKE2 Gm44182-201ENSMUST00000204052 115 ntBASIC2.08□□□□□ -2.08
Trem1Q9JKE2 AC144783.2-201ENSMUST00000219089 195 ntBASIC2.08□□□□□ -2.08
Trem1Q9JKE2 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC2.08□□□□□ -2.08
Trem1Q9JKE2 AC154424.1-201ENSMUST00000225883 799 ntBASIC2.08□□□□□ -2.08
Trem1Q9JKE2 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Trem1Q9JKE2 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
Trem1Q9JKE2 Gm19428-201ENSMUST00000220512 1995 ntBASIC2.07□□□□□ -2.08
Trem1Q9JKE2 Gm14049-201ENSMUST00000121009 636 ntBASIC2.07□□□□□ -2.08
Trem1Q9JKE2 Gm23885-201ENSMUST00000122682 294 ntBASIC2.07□□□□□ -2.08
Trem1Q9JKE2 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Trem1Q9JKE2 Gm16510-201ENSMUST00000153501 249 ntBASIC2.07□□□□□ -2.08
Trem1Q9JKE2 Gm17187-201ENSMUST00000164622 410 ntBASIC2.07□□□□□ -2.08
Trem1Q9JKE2 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Trem1Q9JKE2 Gm25156-201ENSMUST00000179809 79 ntBASIC2.07□□□□□ -2.08
Trem1Q9JKE2 Gm3852-201ENSMUST00000182781 264 ntBASIC2.07□□□□□ -2.08
Trem1Q9JKE2 Gm5116-201ENSMUST00000187732 463 ntBASIC2.07□□□□□ -2.08
Trem1Q9JKE2 Gm29627-201ENSMUST00000187984 463 ntBASIC2.07□□□□□ -2.08
Trem1Q9JKE2 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
Trem1Q9JKE2 AC192334.2-201ENSMUST00000223087 1091 ntBASIC2.07□□□□□ -2.08
Trem1Q9JKE2 CT030182.3-201ENSMUST00000225986 582 ntBASIC2.07□□□□□ -2.08
Trem1Q9JKE2 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Trem1Q9JKE2 Gm22810-201ENSMUST00000082741 158 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms