Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Gm37455-201ENSMUST00000191993 529 ntBASIC1.37□□□□□ -2.19
Trem3Q9JKE1 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC1.37□□□□□ -2.19
Trem3Q9JKE1 Gm19140-201ENSMUST00000209790 421 ntBASIC1.37□□□□□ -2.19
Trem3Q9JKE1 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Trem3Q9JKE1 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.37□□□□□ -2.19
Trem3Q9JKE1 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC1.37□□□□□ -2.19
Trem3Q9JKE1 AC174797.4-201ENSMUST00000225510 347 ntBASIC1.37□□□□□ -2.19
Trem3Q9JKE1 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Trem3Q9JKE1 Gm23650-201ENSMUST00000083355 70 ntBASIC1.37□□□□□ -2.19
Trem3Q9JKE1 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
Trem3Q9JKE1 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC1.37□□□□□ -2.19
Trem3Q9JKE1 Gm38255-201ENSMUST00000194910 2996 ntBASIC1.37□□□□□ -2.19
Trem3Q9JKE1 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
Trem3Q9JKE1 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
Trem3Q9JKE1 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.36□□□□□ -2.19
Trem3Q9JKE1 Gm14932-201ENSMUST00000117112 453 ntBASIC1.36□□□□□ -2.19
Trem3Q9JKE1 Gm12646-201ENSMUST00000119144 238 ntBASIC1.36□□□□□ -2.19
Trem3Q9JKE1 Gm14915-201ENSMUST00000120747 204 ntBASIC1.36□□□□□ -2.19
Trem3Q9JKE1 Gm16428-201ENSMUST00000121193 723 ntBASIC1.36□□□□□ -2.19
Trem3Q9JKE1 Gm15536-201ENSMUST00000121411 114 ntBASIC1.36□□□□□ -2.19
Trem3Q9JKE1 Gm14694-201ENSMUST00000121856 282 ntBASIC1.36□□□□□ -2.19
Trem3Q9JKE1 Gm24878-201ENSMUST00000158782 104 ntBASIC1.36□□□□□ -2.19
Trem3Q9JKE1 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC1.36□□□□□ -2.19
Trem3Q9JKE1 Gm23860-201ENSMUST00000179446 132 ntBASIC1.36□□□□□ -2.19
Trem3Q9JKE1 Gm24969-201ENSMUST00000180331 79 ntBASIC1.36□□□□□ -2.19
Trem3Q9JKE1 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
Trem3Q9JKE1 Ighv1-28-201ENSMUST00000192987 351 ntBASIC1.36□□□□□ -2.19
Trem3Q9JKE1 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.36□□□□□ -2.19
Trem3Q9JKE1 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.36□□□□□ -2.19
Trem3Q9JKE1 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC1.36□□□□□ -2.19
Trem3Q9JKE1 AC158803.1-201ENSMUST00000219495 316 ntBASIC1.36□□□□□ -2.19
Trem3Q9JKE1 AC122924.2-201ENSMUST00000220799 298 ntBASIC1.36□□□□□ -2.19
Trem3Q9JKE1 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.36□□□□□ -2.19
Trem3Q9JKE1 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
Trem3Q9JKE1 Gm25411-201ENSMUST00000083760 151 ntBASIC1.36□□□□□ -2.19
Trem3Q9JKE1 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC1.36□□□□□ -2.19
Trem3Q9JKE1 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
Trem3Q9JKE1 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Trem3Q9JKE1 Gm20679-201ENSMUST00000177285 1402 ntBASIC1.35□□□□□ -2.19
Trem3Q9JKE1 Mir873a-201ENSMUST00000104863 77 ntBASIC1.35□□□□□ -2.19
Trem3Q9JKE1 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
Trem3Q9JKE1 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Trem3Q9JKE1 Defa-ps6-201ENSMUST00000122172 282 ntBASIC1.35□□□□□ -2.19
Trem3Q9JKE1 Gm25279-201ENSMUST00000122608 133 ntBASIC1.35□□□□□ -2.19
Trem3Q9JKE1 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC1.35□□□□□ -2.19
Trem3Q9JKE1 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
Trem3Q9JKE1 Gm17085-201ENSMUST00000165425 502 ntBASIC1.35□□□□□ -2.19
Trem3Q9JKE1 Gm19932-201ENSMUST00000177033 313 ntBASIC1.35□□□□□ -2.19
Trem3Q9JKE1 Gm26864-201ENSMUST00000181346 156 ntBASIC1.35□□□□□ -2.19
Trem3Q9JKE1 Gm32175-201ENSMUST00000193641 346 ntBASIC1.35□□□□□ -2.19
Trem3Q9JKE1 Gm18635-201ENSMUST00000199020 1060 ntBASIC1.35□□□□□ -2.19
Trem3Q9JKE1 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC1.35□□□□□ -2.19
Trem3Q9JKE1 Gm44181-201ENSMUST00000203106 483 ntBASIC1.35□□□□□ -2.19
Trem3Q9JKE1 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC1.35□□□□□ -2.19
Trem3Q9JKE1 AC172027.1-201ENSMUST00000217659 337 ntBASIC1.35□□□□□ -2.19
Trem3Q9JKE1 AC167202.1-201ENSMUST00000219027 331 ntBASIC1.35□□□□□ -2.19
Trem3Q9JKE1 AC154552.4-201ENSMUST00000222171 151 ntBASIC1.35□□□□□ -2.19
Trem3Q9JKE1 AC183092.2-201ENSMUST00000225542 1153 ntBASIC1.35□□□□□ -2.19
Trem3Q9JKE1 Gm22683-201ENSMUST00000082854 137 ntBASIC1.35□□□□□ -2.19
Trem3Q9JKE1 Gm24412-201ENSMUST00000083426 109 ntBASIC1.35□□□□□ -2.19
Trem3Q9JKE1 Mir107-201ENSMUST00000083660 87 ntBASIC1.35□□□□□ -2.19
Trem3Q9JKE1 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
Trem3Q9JKE1 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Trem3Q9JKE1 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
Trem3Q9JKE1 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
Trem3Q9JKE1 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC1.34□□□□□ -2.19
Trem3Q9JKE1 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
Trem3Q9JKE1 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC1.34□□□□□ -2.19
Trem3Q9JKE1 Gm15110-201ENSMUST00000117545 881 ntBASIC1.34□□□□□ -2.19
Trem3Q9JKE1 Gm14899-201ENSMUST00000118673 548 ntBASIC1.34□□□□□ -2.19
Trem3Q9JKE1 Gm12935-201ENSMUST00000119352 246 ntBASIC1.34□□□□□ -2.19
Trem3Q9JKE1 Gm15112-201ENSMUST00000120152 860 ntBASIC1.34□□□□□ -2.19
Trem3Q9JKE1 Gm12096-201ENSMUST00000121149 829 ntBASIC1.34□□□□□ -2.19
Trem3Q9JKE1 Gm23958-201ENSMUST00000157207 105 ntBASIC1.34□□□□□ -2.19
Trem3Q9JKE1 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC1.34□□□□□ -2.19
Trem3Q9JKE1 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC1.34□□□□□ -2.19
Trem3Q9JKE1 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.19
Trem3Q9JKE1 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
Trem3Q9JKE1 Gm44391-201ENSMUST00000198490 93 ntBASIC1.34□□□□□ -2.19
Trem3Q9JKE1 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC1.34□□□□□ -2.19
Trem3Q9JKE1 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.34□□□□□ -2.19
Trem3Q9JKE1 Gm30738-201ENSMUST00000221346 502 ntBASIC1.34□□□□□ -2.19
Trem3Q9JKE1 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
Trem3Q9JKE1 Gm24406-201ENSMUST00000083026 128 ntBASIC1.34□□□□□ -2.19
Trem3Q9JKE1 Gm23040-201ENSMUST00000083869 163 ntBASIC1.34□□□□□ -2.19
Trem3Q9JKE1 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
Trem3Q9JKE1 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC1.34□□□□□ -2.2
Trem3Q9JKE1 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
Trem3Q9JKE1 Gm11786-201ENSMUST00000120799 155 ntBASIC1.33□□□□□ -2.2
Trem3Q9JKE1 Gm14629-201ENSMUST00000122428 144 ntBASIC1.33□□□□□ -2.2
Trem3Q9JKE1 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC1.33□□□□□ -2.2
Trem3Q9JKE1 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC1.33□□□□□ -2.2
Trem3Q9JKE1 Gm25621-201ENSMUST00000157223 114 ntBASIC1.33□□□□□ -2.2
Trem3Q9JKE1 Gm26348-201ENSMUST00000157528 240 ntBASIC1.33□□□□□ -2.2
Trem3Q9JKE1 Gm18416-201ENSMUST00000175635 1003 ntBASIC1.33□□□□□ -2.2
Trem3Q9JKE1 Mir6351-201ENSMUST00000183826 99 ntBASIC1.33□□□□□ -2.2
Trem3Q9JKE1 Gm27715-201ENSMUST00000184714 260 ntBASIC1.33□□□□□ -2.2
Trem3Q9JKE1 Gm37987-201ENSMUST00000194999 825 ntBASIC1.33□□□□□ -2.2
Trem3Q9JKE1 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Trem3Q9JKE1 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 104.3 ms