Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 AC116726.2-201ENSMUST00000217629 986 ntBASIC0.64□□□□□ -2.31
Smco4Q9JIS3 AL590614.1-201ENSMUST00000226037 268 ntBASIC0.64□□□□□ -2.31
Smco4Q9JIS3 AC155314.1-201ENSMUST00000227624 508 ntBASIC0.64□□□□□ -2.31
Smco4Q9JIS3 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC0.64□□□□□ -2.31
Smco4Q9JIS3 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
Smco4Q9JIS3 Gm19074-201ENSMUST00000218915 1429 ntBASIC0.64□□□□□ -2.31
Smco4Q9JIS3 Gm45872-201ENSMUST00000209804 1584 ntBASIC0.63□□□□□ -2.31
Smco4Q9JIS3 Gm24068-201ENSMUST00000104513 132 ntBASIC0.63□□□□□ -2.31
Smco4Q9JIS3 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC0.63□□□□□ -2.31
Smco4Q9JIS3 Gm16383-201ENSMUST00000118122 232 ntBASIC0.63□□□□□ -2.31
Smco4Q9JIS3 Gm22227-201ENSMUST00000157356 259 ntBASIC0.63□□□□□ -2.31
Smco4Q9JIS3 Gm25333-201ENSMUST00000158035 246 ntBASIC0.63□□□□□ -2.31
Smco4Q9JIS3 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC0.63□□□□□ -2.31
Smco4Q9JIS3 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC0.63□□□□□ -2.31
Smco4Q9JIS3 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC0.63□□□□□ -2.31
Smco4Q9JIS3 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
Smco4Q9JIS3 Gm45296-201ENSMUST00000209625 205 ntBASIC0.63□□□□□ -2.31
Smco4Q9JIS3 AC091260.1-201ENSMUST00000216112 229 ntBASIC0.63□□□□□ -2.31
Smco4Q9JIS3 CT030687.1-201ENSMUST00000221854 162 ntBASIC0.63□□□□□ -2.31
Smco4Q9JIS3 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
Smco4Q9JIS3 Gm37061-201ENSMUST00000195066 3243 ntBASIC0.62□□□□□ -2.31
Smco4Q9JIS3 Gm22780-201ENSMUST00000104084 132 ntBASIC0.62□□□□□ -2.31
Smco4Q9JIS3 Gm13678-201ENSMUST00000118926 340 ntBASIC0.62□□□□□ -2.31
Smco4Q9JIS3 Gm15497-201ENSMUST00000119137 551 ntBASIC0.62□□□□□ -2.31
Smco4Q9JIS3 Gm9001-201ENSMUST00000121642 399 ntBASIC0.62□□□□□ -2.31
Smco4Q9JIS3 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC0.62□□□□□ -2.31
Smco4Q9JIS3 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC0.62□□□□□ -2.31
Smco4Q9JIS3 Gm24915-201ENSMUST00000157288 78 ntBASIC0.62□□□□□ -2.31
Smco4Q9JIS3 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
Smco4Q9JIS3 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC0.62□□□□□ -2.31
Smco4Q9JIS3 Gm27520-201ENSMUST00000184872 81 ntBASIC0.62□□□□□ -2.31
Smco4Q9JIS3 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC0.62□□□□□ -2.31
Smco4Q9JIS3 Gm27587-201ENSMUST00000185116 163 ntBASIC0.62□□□□□ -2.31
Smco4Q9JIS3 Gm37979-201ENSMUST00000193065 712 ntBASIC0.62□□□□□ -2.31
Smco4Q9JIS3 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
Smco4Q9JIS3 Gm38167-201ENSMUST00000195704 1178 ntBASIC0.62□□□□□ -2.31
Smco4Q9JIS3 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC0.62□□□□□ -2.31
Smco4Q9JIS3 Gm43512-201ENSMUST00000198495 176 ntBASIC0.62□□□□□ -2.31
Smco4Q9JIS3 Gm18691-201ENSMUST00000203593 872 ntBASIC0.62□□□□□ -2.31
Smco4Q9JIS3 Gm9377-201ENSMUST00000207227 623 ntBASIC0.62□□□□□ -2.31
Smco4Q9JIS3 Gm21089-201ENSMUST00000215843 325 ntBASIC0.62□□□□□ -2.31
Smco4Q9JIS3 AC158521.1-201ENSMUST00000225295 660 ntBASIC0.62□□□□□ -2.31
Smco4Q9JIS3 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
Smco4Q9JIS3 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
Smco4Q9JIS3 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
Smco4Q9JIS3 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
Smco4Q9JIS3 Gm13046-201ENSMUST00000117391 501 ntBASIC0.61□□□□□ -2.31
Smco4Q9JIS3 Mup-ps12-201ENSMUST00000126217 549 ntBASIC0.61□□□□□ -2.31
Smco4Q9JIS3 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC0.61□□□□□ -2.31
Smco4Q9JIS3 Gm26157-201ENSMUST00000158974 126 ntBASIC0.61□□□□□ -2.31
Smco4Q9JIS3 Mir3086-201ENSMUST00000175072 87 ntBASIC0.61□□□□□ -2.31
Smco4Q9JIS3 Mir5118-201ENSMUST00000175551 67 ntBASIC0.61□□□□□ -2.31
Smco4Q9JIS3 Gm20794-201ENSMUST00000177626 628 ntBASIC0.61□□□□□ -2.31
Smco4Q9JIS3 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC0.61□□□□□ -2.31
Smco4Q9JIS3 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC0.61□□□□□ -2.31
Smco4Q9JIS3 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC0.61□□□□□ -2.31
Smco4Q9JIS3 Gm22131-201ENSMUST00000178415 94 ntBASIC0.61□□□□□ -2.31
Smco4Q9JIS3 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC0.61□□□□□ -2.31
Smco4Q9JIS3 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC0.61□□□□□ -2.31
Smco4Q9JIS3 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC0.61□□□□□ -2.31
Smco4Q9JIS3 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC0.61□□□□□ -2.31
Smco4Q9JIS3 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC0.61□□□□□ -2.31
Smco4Q9JIS3 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC0.61□□□□□ -2.31
Smco4Q9JIS3 Gm27760-201ENSMUST00000185048 114 ntBASIC0.61□□□□□ -2.31
Smco4Q9JIS3 Gm28356-202ENSMUST00000187566 858 ntBASIC0.61□□□□□ -2.31
Smco4Q9JIS3 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
Smco4Q9JIS3 Gm20885-201ENSMUST00000190192 654 ntBASIC0.61□□□□□ -2.31
Smco4Q9JIS3 Gm33571-201ENSMUST00000193271 657 ntBASIC0.61□□□□□ -2.31
Smco4Q9JIS3 Trbv7-201ENSMUST00000193339 402 ntBASIC0.61□□□□□ -2.31
Smco4Q9JIS3 Gm36866-201ENSMUST00000193343 657 ntBASIC0.61□□□□□ -2.31
Smco4Q9JIS3 Gm36047-201ENSMUST00000193659 657 ntBASIC0.61□□□□□ -2.31
Smco4Q9JIS3 Gm20857-201ENSMUST00000194766 657 ntBASIC0.61□□□□□ -2.31
Smco4Q9JIS3 Gm20858-201ENSMUST00000195459 657 ntBASIC0.61□□□□□ -2.31
Smco4Q9JIS3 Gm30638-201ENSMUST00000195570 656 ntBASIC0.61□□□□□ -2.31
Smco4Q9JIS3 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC0.61□□□□□ -2.31
Smco4Q9JIS3 Igkv15-102-201ENSMUST00000197885 287 ntBASIC0.61□□□□□ -2.31
Smco4Q9JIS3 Gm44666-201ENSMUST00000208544 391 ntBASIC0.61□□□□□ -2.31
Smco4Q9JIS3 Gm45366-201ENSMUST00000209828 384 ntBASIC0.61□□□□□ -2.31
Smco4Q9JIS3 Gm45456-201ENSMUST00000210841 243 ntBASIC0.61□□□□□ -2.31
Smco4Q9JIS3 CT025552.1-201ENSMUST00000224561 521 ntBASIC0.61□□□□□ -2.31
Smco4Q9JIS3 AC170600.1-201ENSMUST00000228763 277 ntBASIC0.61□□□□□ -2.31
Smco4Q9JIS3 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
Smco4Q9JIS3 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
Smco4Q9JIS3 Gm22829-201ENSMUST00000083771 106 ntBASIC0.61□□□□□ -2.31
Smco4Q9JIS3 AC124746.1-201ENSMUST00000227535 1300 ntBASIC0.61□□□□□ -2.31
Smco4Q9JIS3 Gm25068-201ENSMUST00000103895 110 ntBASIC0.6□□□□□ -2.31
Smco4Q9JIS3 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
Smco4Q9JIS3 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC0.6□□□□□ -2.31
Smco4Q9JIS3 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC0.6□□□□□ -2.31
Smco4Q9JIS3 Mir3092-201ENSMUST00000174954 96 ntBASIC0.6□□□□□ -2.31
Smco4Q9JIS3 Mir6406-201ENSMUST00000183592 120 ntBASIC0.6□□□□□ -2.31
Smco4Q9JIS3 Gm7837-201ENSMUST00000190873 412 ntBASIC0.6□□□□□ -2.31
Smco4Q9JIS3 Gm29192-201ENSMUST00000190942 377 ntBASIC0.6□□□□□ -2.31
Smco4Q9JIS3 Gm29740-201ENSMUST00000193182 655 ntBASIC0.6□□□□□ -2.31
Smco4Q9JIS3 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC0.6□□□□□ -2.31
Smco4Q9JIS3 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC0.6□□□□□ -2.31
Smco4Q9JIS3 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
Smco4Q9JIS3 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
Smco4Q9JIS3 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
Smco4Q9JIS3 Gm14463-201ENSMUST00000121117 498 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms