Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Trim54Q9ERP3 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Trim54Q9ERP3 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Trim54Q9ERP3 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Trim54Q9ERP3 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Trim54Q9ERP3 Gm14390-201ENSMUST00000117505 1695 ntBASIC3.37□□□□□ -1.87
Trim54Q9ERP3 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Trim54Q9ERP3 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Trim54Q9ERP3 Gm14987-201ENSMUST00000117820 676 ntBASIC3.37□□□□□ -1.87
Trim54Q9ERP3 Gm24959-201ENSMUST00000157924 146 ntBASIC3.37□□□□□ -1.87
Trim54Q9ERP3 Gm22136-201ENSMUST00000158751 268 ntBASIC3.37□□□□□ -1.87
Trim54Q9ERP3 Gm16569-201ENSMUST00000160526 314 ntBASIC3.37□□□□□ -1.87
Trim54Q9ERP3 Gm26061-201ENSMUST00000175584 108 ntBASIC3.37□□□□□ -1.87
Trim54Q9ERP3 Gm23402-201ENSMUST00000178130 107 ntBASIC3.37□□□□□ -1.87
Trim54Q9ERP3 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Trim54Q9ERP3 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC3.37□□□□□ -1.87
Trim54Q9ERP3 Gm28779-201ENSMUST00000189678 323 ntBASIC3.37□□□□□ -1.87
Trim54Q9ERP3 Igkv13-64-201ENSMUST00000198143 343 ntBASIC3.37□□□□□ -1.87
Trim54Q9ERP3 Gm43746-201ENSMUST00000200028 317 ntBASIC3.37□□□□□ -1.87
Trim54Q9ERP3 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC3.37□□□□□ -1.87
Trim54Q9ERP3 Gm45778-201ENSMUST00000211959 153 ntBASIC3.37□□□□□ -1.87
Trim54Q9ERP3 Gm19572-201ENSMUST00000214326 338 ntBASIC3.37□□□□□ -1.87
Trim54Q9ERP3 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC3.37□□□□□ -1.87
Trim54Q9ERP3 AC160031.2-201ENSMUST00000218242 274 ntBASIC3.37□□□□□ -1.87
Trim54Q9ERP3 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.37□□□□□ -1.87
Trim54Q9ERP3 AC124537.1-201ENSMUST00000222890 159 ntBASIC3.37□□□□□ -1.87
Trim54Q9ERP3 AC122393.3-201ENSMUST00000226343 1059 ntBASIC3.37□□□□□ -1.87
Trim54Q9ERP3 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.37□□□□□ -1.87
Trim54Q9ERP3 AC158981.3-202ENSMUST00000228906 523 ntBASIC3.37□□□□□ -1.87
Trim54Q9ERP3 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Trim54Q9ERP3 Gm22249-201ENSMUST00000082485 136 ntBASIC3.37□□□□□ -1.87
Trim54Q9ERP3 Gm22507-201ENSMUST00000082773 160 ntBASIC3.37□□□□□ -1.87
Trim54Q9ERP3 Gm25257-201ENSMUST00000083907 110 ntBASIC3.37□□□□□ -1.87
Trim54Q9ERP3 Olfr575-201ENSMUST00000084812 957 ntBASIC3.37□□□□□ -1.87
Trim54Q9ERP3 Gm43663-201ENSMUST00000198643 1505 ntBASIC3.37□□□□□ -1.87
Trim54Q9ERP3 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Trim54Q9ERP3 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Trim54Q9ERP3 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Trim54Q9ERP3 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
Trim54Q9ERP3 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Trim54Q9ERP3 Mir687-201ENSMUST00000102166 89 ntBASIC3.36□□□□□ -1.87
Trim54Q9ERP3 Gm12871-201ENSMUST00000118758 438 ntBASIC3.36□□□□□ -1.87
Trim54Q9ERP3 Gm15986-201ENSMUST00000122153 400 ntBASIC3.36□□□□□ -1.87
Trim54Q9ERP3 Gm23411-201ENSMUST00000157988 62 ntBASIC3.36□□□□□ -1.87
Trim54Q9ERP3 Gm22538-201ENSMUST00000158169 299 ntBASIC3.36□□□□□ -1.87
Trim54Q9ERP3 Gm22766-201ENSMUST00000158372 99 ntBASIC3.36□□□□□ -1.87
Trim54Q9ERP3 Gm29602-201ENSMUST00000186887 442 ntBASIC3.36□□□□□ -1.87
Trim54Q9ERP3 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.36□□□□□ -1.87
Trim54Q9ERP3 Gm8242-202ENSMUST00000193056 475 ntBASIC3.36□□□□□ -1.87
Trim54Q9ERP3 Gm37523-201ENSMUST00000194901 412 ntBASIC3.36□□□□□ -1.87
Trim54Q9ERP3 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC3.36□□□□□ -1.87
Trim54Q9ERP3 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.36□□□□□ -1.87
Trim54Q9ERP3 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.36□□□□□ -1.87
Trim54Q9ERP3 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC3.36□□□□□ -1.87
Trim54Q9ERP3 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.36□□□□□ -1.87
Trim54Q9ERP3 CT009713.6-201ENSMUST00000223615 294 ntBASIC3.36□□□□□ -1.87
Trim54Q9ERP3 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
Trim54Q9ERP3 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC3.36□□□□□ -1.87
Trim54Q9ERP3 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Trim54Q9ERP3 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Trim54Q9ERP3 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
Trim54Q9ERP3 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.35□□□□□ -1.87
Trim54Q9ERP3 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
Trim54Q9ERP3 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Trim54Q9ERP3 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.35□□□□□ -1.87
Trim54Q9ERP3 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Trim54Q9ERP3 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Trim54Q9ERP3 Gm26477-201ENSMUST00000122617 323 ntBASIC3.35□□□□□ -1.87
Trim54Q9ERP3 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.35□□□□□ -1.87
Trim54Q9ERP3 Gm26275-201ENSMUST00000157101 268 ntBASIC3.35□□□□□ -1.87
Trim54Q9ERP3 Gm25373-201ENSMUST00000158156 115 ntBASIC3.35□□□□□ -1.87
Trim54Q9ERP3 Gm25243-201ENSMUST00000174912 207 ntBASIC3.35□□□□□ -1.87
Trim54Q9ERP3 Gm20651-201ENSMUST00000177219 329 ntBASIC3.35□□□□□ -1.87
Trim54Q9ERP3 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Trim54Q9ERP3 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Trim54Q9ERP3 Gm9022-202ENSMUST00000183285 483 ntBASIC3.35□□□□□ -1.87
Trim54Q9ERP3 Gm18356-201ENSMUST00000185677 623 ntBASIC3.35□□□□□ -1.87
Trim54Q9ERP3 Gm28141-201ENSMUST00000186676 342 ntBASIC3.35□□□□□ -1.87
Trim54Q9ERP3 Gm24350-202ENSMUST00000198309 132 ntBASIC3.35□□□□□ -1.87
Trim54Q9ERP3 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.35□□□□□ -1.87
Trim54Q9ERP3 Gm22577-201ENSMUST00000083731 109 ntBASIC3.35□□□□□ -1.87
Trim54Q9ERP3 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC3.35□□□□□ -1.87
Trim54Q9ERP3 Gm24817-201ENSMUST00000093672 105 ntBASIC3.35□□□□□ -1.87
Trim54Q9ERP3 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Trim54Q9ERP3 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
Trim54Q9ERP3 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Trim54Q9ERP3 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Trim54Q9ERP3 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Trim54Q9ERP3 Gm12386-201ENSMUST00000117380 688 ntBASIC3.34□□□□□ -1.87
Trim54Q9ERP3 Gm12515-201ENSMUST00000120116 361 ntBASIC3.34□□□□□ -1.87
Trim54Q9ERP3 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC3.34□□□□□ -1.87
Trim54Q9ERP3 Gm15733-201ENSMUST00000132957 242 ntBASIC3.34□□□□□ -1.87
Trim54Q9ERP3 Gm26414-201ENSMUST00000157674 269 ntBASIC3.34□□□□□ -1.87
Trim54Q9ERP3 Gm25335-201ENSMUST00000158043 103 ntBASIC3.34□□□□□ -1.87
Trim54Q9ERP3 Gm22668-201ENSMUST00000158716 260 ntBASIC3.34□□□□□ -1.87
Trim54Q9ERP3 Gm17187-201ENSMUST00000164622 410 ntBASIC3.34□□□□□ -1.87
Trim54Q9ERP3 Gm17148-201ENSMUST00000164702 249 ntBASIC3.34□□□□□ -1.87
Trim54Q9ERP3 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Trim54Q9ERP3 Mir6335-201ENSMUST00000184081 98 ntBASIC3.34□□□□□ -1.87
Trim54Q9ERP3 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC3.34□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms