Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm15692-201ENSMUST00000152173 352 ntBASIC1.88□□□□□ -2.11
Lima1Q9ERG0 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC1.88□□□□□ -2.11
Lima1Q9ERG0 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Lima1Q9ERG0 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Lima1Q9ERG0 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Lima1Q9ERG0 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Lima1Q9ERG0 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Lima1Q9ERG0 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Lima1Q9ERG0 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.88□□□□□ -2.11
Lima1Q9ERG0 Gm27428-201ENSMUST00000184289 110 ntBASIC1.88□□□□□ -2.11
Lima1Q9ERG0 Gm28745-201ENSMUST00000190069 305 ntBASIC1.88□□□□□ -2.11
Lima1Q9ERG0 Gm18964-201ENSMUST00000193013 563 ntBASIC1.88□□□□□ -2.11
Lima1Q9ERG0 Gm37993-201ENSMUST00000195301 988 ntBASIC1.88□□□□□ -2.11
Lima1Q9ERG0 Gm42958-201ENSMUST00000197595 318 ntBASIC1.88□□□□□ -2.11
Lima1Q9ERG0 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC1.88□□□□□ -2.11
Lima1Q9ERG0 Ighv1-68-201ENSMUST00000198789 294 ntBASIC1.88□□□□□ -2.11
Lima1Q9ERG0 Gm43978-201ENSMUST00000203491 451 ntBASIC1.88□□□□□ -2.11
Lima1Q9ERG0 Gm29754-201ENSMUST00000206269 358 ntBASIC1.88□□□□□ -2.11
Lima1Q9ERG0 AC160031.2-201ENSMUST00000218242 274 ntBASIC1.88□□□□□ -2.11
Lima1Q9ERG0 Gm2446-201ENSMUST00000220144 772 ntBASIC1.88□□□□□ -2.11
Lima1Q9ERG0 Gm35558-202ENSMUST00000221819 499 ntBASIC1.88□□□□□ -2.11
Lima1Q9ERG0 AC147633.1-201ENSMUST00000225134 259 ntBASIC1.88□□□□□ -2.11
Lima1Q9ERG0 Gm26055-201ENSMUST00000083038 107 ntBASIC1.88□□□□□ -2.11
Lima1Q9ERG0 Gm38255-201ENSMUST00000194910 2996 ntBASIC1.88□□□□□ -2.11
Lima1Q9ERG0 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Lima1Q9ERG0 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Lima1Q9ERG0 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Lima1Q9ERG0 Gm25090-201ENSMUST00000104000 132 ntBASIC1.87□□□□□ -2.11
Lima1Q9ERG0 Gm15896-201ENSMUST00000118045 440 ntBASIC1.87□□□□□ -2.11
Lima1Q9ERG0 Gm15760-201ENSMUST00000119553 283 ntBASIC1.87□□□□□ -2.11
Lima1Q9ERG0 Gm26256-201ENSMUST00000122499 186 ntBASIC1.87□□□□□ -2.11
Lima1Q9ERG0 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC1.87□□□□□ -2.11
Lima1Q9ERG0 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC1.87□□□□□ -2.11
Lima1Q9ERG0 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Lima1Q9ERG0 Gm25996-201ENSMUST00000175393 117 ntBASIC1.87□□□□□ -2.11
Lima1Q9ERG0 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Lima1Q9ERG0 Mir7068-201ENSMUST00000183439 74 ntBASIC1.87□□□□□ -2.11
Lima1Q9ERG0 Mir6901-201ENSMUST00000185062 62 ntBASIC1.87□□□□□ -2.11
Lima1Q9ERG0 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Lima1Q9ERG0 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC1.87□□□□□ -2.11
Lima1Q9ERG0 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC1.87□□□□□ -2.11
Lima1Q9ERG0 Gm45439-201ENSMUST00000211723 359 ntBASIC1.87□□□□□ -2.11
Lima1Q9ERG0 Gm18000-201ENSMUST00000212153 800 ntBASIC1.87□□□□□ -2.11
Lima1Q9ERG0 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC1.87□□□□□ -2.11
Lima1Q9ERG0 AC120540.1-201ENSMUST00000221879 324 ntBASIC1.87□□□□□ -2.11
Lima1Q9ERG0 Gm42536-201ENSMUST00000197562 1613 ntBASIC1.87□□□□□ -2.11
Lima1Q9ERG0 Gm45652-201ENSMUST00000210926 3831 ntBASIC1.86□□□□□ -2.11
Lima1Q9ERG0 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC1.86□□□□□ -2.11
Lima1Q9ERG0 Gm25213-201ENSMUST00000102388 113 ntBASIC1.86□□□□□ -2.11
Lima1Q9ERG0 Gm13343-201ENSMUST00000116474 105 ntBASIC1.86□□□□□ -2.11
Lima1Q9ERG0 Gm23551-201ENSMUST00000116852 121 ntBASIC1.86□□□□□ -2.11
Lima1Q9ERG0 Gm6923-201ENSMUST00000118343 406 ntBASIC1.86□□□□□ -2.11
Lima1Q9ERG0 Gm2003-201ENSMUST00000118537 636 ntBASIC1.86□□□□□ -2.11
Lima1Q9ERG0 Gm12507-201ENSMUST00000119155 415 ntBASIC1.86□□□□□ -2.11
Lima1Q9ERG0 Gm14694-201ENSMUST00000121856 282 ntBASIC1.86□□□□□ -2.11
Lima1Q9ERG0 Gm24908-201ENSMUST00000157294 127 ntBASIC1.86□□□□□ -2.11
Lima1Q9ERG0 Gm24783-201ENSMUST00000157639 100 ntBASIC1.86□□□□□ -2.11
Lima1Q9ERG0 Gm25334-201ENSMUST00000158036 110 ntBASIC1.86□□□□□ -2.11
Lima1Q9ERG0 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC1.86□□□□□ -2.11
Lima1Q9ERG0 Mir3092-201ENSMUST00000174954 96 ntBASIC1.86□□□□□ -2.11
Lima1Q9ERG0 Gm25642-201ENSMUST00000175137 66 ntBASIC1.86□□□□□ -2.11
Lima1Q9ERG0 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC1.86□□□□□ -2.11
Lima1Q9ERG0 Trbv7-201ENSMUST00000193339 402 ntBASIC1.86□□□□□ -2.11
Lima1Q9ERG0 Gm44391-201ENSMUST00000198490 93 ntBASIC1.86□□□□□ -2.11
Lima1Q9ERG0 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC1.86□□□□□ -2.11
Lima1Q9ERG0 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC1.86□□□□□ -2.11
Lima1Q9ERG0 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
Lima1Q9ERG0 Gm8940-201ENSMUST00000212585 219 ntBASIC1.86□□□□□ -2.11
Lima1Q9ERG0 Gm6109-201ENSMUST00000223297 348 ntBASIC1.86□□□□□ -2.11
Lima1Q9ERG0 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Lima1Q9ERG0 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Lima1Q9ERG0 Mir125b-2-201ENSMUST00000083538 71 ntBASIC1.86□□□□□ -2.11
Lima1Q9ERG0 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Lima1Q9ERG0 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.86□□□□□ -2.11
Lima1Q9ERG0 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.85□□□□□ -2.11
Lima1Q9ERG0 n-R5s200-201ENSMUST00000104194 113 ntBASIC1.85□□□□□ -2.11
Lima1Q9ERG0 Gm7164-201ENSMUST00000117503 450 ntBASIC1.85□□□□□ -2.11
Lima1Q9ERG0 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
Lima1Q9ERG0 Gm24478-201ENSMUST00000157439 158 ntBASIC1.85□□□□□ -2.11
Lima1Q9ERG0 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC1.85□□□□□ -2.11
Lima1Q9ERG0 Gm24656-201ENSMUST00000177548 132 ntBASIC1.85□□□□□ -2.11
Lima1Q9ERG0 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC1.85□□□□□ -2.11
Lima1Q9ERG0 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.85□□□□□ -2.11
Lima1Q9ERG0 Gm19649-201ENSMUST00000201126 822 ntBASIC1.85□□□□□ -2.11
Lima1Q9ERG0 Gm44459-201ENSMUST00000203926 160 ntBASIC1.85□□□□□ -2.11
Lima1Q9ERG0 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Lima1Q9ERG0 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC1.85□□□□□ -2.11
Lima1Q9ERG0 Gm19326-201ENSMUST00000219818 326 ntBASIC1.85□□□□□ -2.11
Lima1Q9ERG0 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC1.85□□□□□ -2.11
Lima1Q9ERG0 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Lima1Q9ERG0 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Lima1Q9ERG0 Gm25411-201ENSMUST00000083760 151 ntBASIC1.85□□□□□ -2.11
Lima1Q9ERG0 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Lima1Q9ERG0 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC1.85□□□□□ -2.11
Lima1Q9ERG0 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Lima1Q9ERG0 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Lima1Q9ERG0 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Lima1Q9ERG0 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
Lima1Q9ERG0 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Lima1Q9ERG0 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms