Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm24978-201ENSMUST00000179782 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm24967-201ENSMUST00000179791 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm24267-201ENSMUST00000179841 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm22288-201ENSMUST00000179904 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm23410-201ENSMUST00000179967 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm22756-201ENSMUST00000180118 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm23512-201ENSMUST00000180237 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm26058-201ENSMUST00000180294 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Mir6541-201ENSMUST00000183649 110 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm28666-201ENSMUST00000186649 274 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC2.69□□□□□ -1.98
Scn4aQ9ER60 AC115047.1-201ENSMUST00000213795 322 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 CT009713.9-201ENSMUST00000223604 389 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm22246-201ENSMUST00000082478 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm22306-201ENSMUST00000082692 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm26331-201ENSMUST00000082824 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm25698-201ENSMUST00000082897 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm24205-201ENSMUST00000082953 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm22505-201ENSMUST00000082956 108 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm25405-201ENSMUST00000082973 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm22628-201ENSMUST00000082988 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm22363-201ENSMUST00000083100 108 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm26496-201ENSMUST00000083150 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm24458-201ENSMUST00000083204 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm23814-201ENSMUST00000083230 102 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm25790-201ENSMUST00000083293 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm22295-201ENSMUST00000083311 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm25127-201ENSMUST00000083336 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm25583-201ENSMUST00000083413 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm24414-201ENSMUST00000083434 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm23095-201ENSMUST00000083446 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm24803-201ENSMUST00000083693 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm22580-201ENSMUST00000083727 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm24260-201ENSMUST00000083741 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm22682-201ENSMUST00000083854 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm25869-201ENSMUST00000083855 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm24693-201ENSMUST00000083885 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm26317-201ENSMUST00000083894 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm22798-201ENSMUST00000083992 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm26427-201ENSMUST00000093648 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Gm22170-201ENSMUST00000097247 107 ntBASIC2.69□□□□□ -1.98
Scn4aQ9ER60 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Scn4aQ9ER60 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Scn4aQ9ER60 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Scn4aQ9ER60 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
Scn4aQ9ER60 Gm14579-201ENSMUST00000117068 283 ntBASIC2.68□□□□□ -1.98
Scn4aQ9ER60 Gm22026-201ENSMUST00000122735 281 ntBASIC2.68□□□□□ -1.98
Scn4aQ9ER60 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC2.68□□□□□ -1.98
Scn4aQ9ER60 Gm24857-201ENSMUST00000158061 310 ntBASIC2.68□□□□□ -1.98
Scn4aQ9ER60 Gm16326-201ENSMUST00000162843 414 ntBASIC2.68□□□□□ -1.98
Scn4aQ9ER60 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC2.68□□□□□ -1.98
Scn4aQ9ER60 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC2.68□□□□□ -1.98
Scn4aQ9ER60 CT009550.5-201ENSMUST00000226286 382 ntBASIC2.68□□□□□ -1.98
Scn4aQ9ER60 AC122393.1-201ENSMUST00000226570 319 ntBASIC2.68□□□□□ -1.98
Scn4aQ9ER60 Mir344-201ENSMUST00000083634 95 ntBASIC2.68□□□□□ -1.98
Scn4aQ9ER60 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Scn4aQ9ER60 Gm13231-201ENSMUST00000119218 2850 ntBASIC2.68□□□□□ -1.98
Scn4aQ9ER60 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Scn4aQ9ER60 Gm14292-201ENSMUST00000118761 456 ntBASIC2.68□□□□□ -1.98
Scn4aQ9ER60 Gm15719-201ENSMUST00000120619 635 ntBASIC2.68□□□□□ -1.98
Scn4aQ9ER60 Gm22561-201ENSMUST00000157331 84 ntBASIC2.68□□□□□ -1.98
Scn4aQ9ER60 Gm5709-201ENSMUST00000177879 1165 ntBASIC2.68□□□□□ -1.98
Scn4aQ9ER60 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.68□□□□□ -1.98
Scn4aQ9ER60 Gm43489-201ENSMUST00000196810 993 ntBASIC2.68□□□□□ -1.98
Scn4aQ9ER60 Gm43626-201ENSMUST00000198575 162 ntBASIC2.68□□□□□ -1.98
Scn4aQ9ER60 Gm43326-201ENSMUST00000198459 1638 ntBASIC2.68□□□□□ -1.98
Scn4aQ9ER60 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Scn4aQ9ER60 Gm14867-201ENSMUST00000120156 866 ntBASIC2.67□□□□□ -1.98
Scn4aQ9ER60 Gm12044-201ENSMUST00000120335 213 ntBASIC2.67□□□□□ -1.98
Scn4aQ9ER60 Gm23183-201ENSMUST00000122595 323 ntBASIC2.67□□□□□ -1.98
Scn4aQ9ER60 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Scn4aQ9ER60 Gm22794-201ENSMUST00000157228 306 ntBASIC2.67□□□□□ -1.98
Scn4aQ9ER60 Gm17119-201ENSMUST00000163943 280 ntBASIC2.67□□□□□ -1.98
Scn4aQ9ER60 Gm29600-201ENSMUST00000188687 377 ntBASIC2.67□□□□□ -1.98
Scn4aQ9ER60 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC2.67□□□□□ -1.98
Scn4aQ9ER60 Gm43198-201ENSMUST00000200927 326 ntBASIC2.67□□□□□ -1.98
Scn4aQ9ER60 Gm44718-201ENSMUST00000206886 359 ntBASIC2.67□□□□□ -1.98
Scn4aQ9ER60 Gm46312-201ENSMUST00000220961 420 ntBASIC2.67□□□□□ -1.98
Scn4aQ9ER60 AC125464.1-201ENSMUST00000228013 512 ntBASIC2.67□□□□□ -1.98
Scn4aQ9ER60 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Scn4aQ9ER60 Gm23848-201ENSMUST00000083826 106 ntBASIC2.67□□□□□ -1.98
Scn4aQ9ER60 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
Scn4aQ9ER60 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC2.66□□□□□ -1.98
Scn4aQ9ER60 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC2.66□□□□□ -1.98
Scn4aQ9ER60 Gm25621-201ENSMUST00000157223 114 ntBASIC2.66□□□□□ -1.98
Scn4aQ9ER60 Gm3102-201ENSMUST00000164236 489 ntBASIC2.66□□□□□ -1.98
Scn4aQ9ER60 Gm26189-201ENSMUST00000179879 107 ntBASIC2.66□□□□□ -1.98
Scn4aQ9ER60 Mir6338-201ENSMUST00000183389 109 ntBASIC2.66□□□□□ -1.98
Scn4aQ9ER60 Gm45192-201ENSMUST00000206749 283 ntBASIC2.66□□□□□ -1.98
Scn4aQ9ER60 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC2.66□□□□□ -1.98
Scn4aQ9ER60 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC2.66□□□□□ -1.98
Scn4aQ9ER60 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Scn4aQ9ER60 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.66□□□□□ -1.98
Scn4aQ9ER60 Gm44679-201ENSMUST00000207202 2908 ntBASIC2.66□□□□□ -1.98
Scn4aQ9ER60 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Scn4aQ9ER60 Gm5596-201ENSMUST00000207988 2421 ntBASIC2.66□□□□□ -1.98
Scn4aQ9ER60 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Scn4aQ9ER60 Gm14469-201ENSMUST00000118363 202 ntBASIC2.65□□□□□ -1.98
Scn4aQ9ER60 Gm14982-201ENSMUST00000121102 442 ntBASIC2.65□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms