Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm13343-201ENSMUST00000116474 105 ntBASIC4.47□□□□□ -1.69
Upf1Q9EPU0 Gm16005-201ENSMUST00000120515 269 ntBASIC4.47□□□□□ -1.69
Upf1Q9EPU0 Gm12785-201ENSMUST00000122052 172 ntBASIC4.47□□□□□ -1.69
Upf1Q9EPU0 Gm24839-201ENSMUST00000122602 107 ntBASIC4.47□□□□□ -1.69
Upf1Q9EPU0 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC4.47□□□□□ -1.69
Upf1Q9EPU0 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC4.47□□□□□ -1.69
Upf1Q9EPU0 Gm14298-201ENSMUST00000139032 237 ntBASIC4.47□□□□□ -1.69
Upf1Q9EPU0 Gm16356-201ENSMUST00000143300 169 ntBASIC4.47□□□□□ -1.69
Upf1Q9EPU0 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Upf1Q9EPU0 Gm26373-201ENSMUST00000157833 103 ntBASIC4.47□□□□□ -1.69
Upf1Q9EPU0 Gm22664-201ENSMUST00000158719 105 ntBASIC4.47□□□□□ -1.69
Upf1Q9EPU0 Gm25486-201ENSMUST00000158726 63 ntBASIC4.47□□□□□ -1.69
Upf1Q9EPU0 Gm16545-201ENSMUST00000161968 463 ntBASIC4.47□□□□□ -1.69
Upf1Q9EPU0 Gm16232-201ENSMUST00000162856 167 ntBASIC4.47□□□□□ -1.69
Upf1Q9EPU0 Gm27999-201ENSMUST00000183539 193 ntBASIC4.47□□□□□ -1.69
Upf1Q9EPU0 Gm27718-201ENSMUST00000183721 86 ntBASIC4.47□□□□□ -1.69
Upf1Q9EPU0 Gm27254-201ENSMUST00000183926 517 ntBASIC4.47□□□□□ -1.69
Upf1Q9EPU0 Mir7009-201ENSMUST00000184519 64 ntBASIC4.47□□□□□ -1.69
Upf1Q9EPU0 Gm37715-201ENSMUST00000193206 235 ntBASIC4.47□□□□□ -1.69
Upf1Q9EPU0 Gm9379-201ENSMUST00000196790 646 ntBASIC4.47□□□□□ -1.69
Upf1Q9EPU0 Gm44308-201ENSMUST00000197080 99 ntBASIC4.47□□□□□ -1.69
Upf1Q9EPU0 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC4.47□□□□□ -1.69
Upf1Q9EPU0 Gm44844-201ENSMUST00000207242 336 ntBASIC4.47□□□□□ -1.69
Upf1Q9EPU0 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC4.47□□□□□ -1.69
Upf1Q9EPU0 Gm10916-201ENSMUST00000080330 483 ntBASIC4.47□□□□□ -1.69
Upf1Q9EPU0 Gm22249-201ENSMUST00000082485 136 ntBASIC4.47□□□□□ -1.69
Upf1Q9EPU0 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Upf1Q9EPU0 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Upf1Q9EPU0 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC4.47□□□□□ -1.69
Upf1Q9EPU0 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Upf1Q9EPU0 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Upf1Q9EPU0 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
Upf1Q9EPU0 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
Upf1Q9EPU0 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.46□□□□□ -1.69
Upf1Q9EPU0 Gm37655-201ENSMUST00000193968 4123 ntBASIC4.46□□□□□ -1.69
Upf1Q9EPU0 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
Upf1Q9EPU0 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Upf1Q9EPU0 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Upf1Q9EPU0 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC4.46□□□□□ -1.7
Upf1Q9EPU0 Gm22956-201ENSMUST00000122520 80 ntBASIC4.46□□□□□ -1.7
Upf1Q9EPU0 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC4.46□□□□□ -1.7
Upf1Q9EPU0 Gm28010-201ENSMUST00000179485 126 ntBASIC4.46□□□□□ -1.7
Upf1Q9EPU0 Gm7329-201ENSMUST00000185915 210 ntBASIC4.46□□□□□ -1.7
Upf1Q9EPU0 Gm29668-201ENSMUST00000187802 315 ntBASIC4.46□□□□□ -1.7
Upf1Q9EPU0 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Upf1Q9EPU0 Gm45313-201ENSMUST00000210584 178 ntBASIC4.46□□□□□ -1.7
Upf1Q9EPU0 Gm46233-201ENSMUST00000217831 449 ntBASIC4.46□□□□□ -1.7
Upf1Q9EPU0 AC158395.1-201ENSMUST00000227206 452 ntBASIC4.46□□□□□ -1.7
Upf1Q9EPU0 Mir496a-201ENSMUST00000093627 79 ntBASIC4.46□□□□□ -1.7
Upf1Q9EPU0 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
Upf1Q9EPU0 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Upf1Q9EPU0 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Upf1Q9EPU0 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
Upf1Q9EPU0 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Upf1Q9EPU0 Gm23941-201ENSMUST00000101953 107 ntBASIC4.45□□□□□ -1.7
Upf1Q9EPU0 Gm22674-201ENSMUST00000104413 131 ntBASIC4.45□□□□□ -1.7
Upf1Q9EPU0 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC4.45□□□□□ -1.7
Upf1Q9EPU0 Gm12571-201ENSMUST00000118132 243 ntBASIC4.45□□□□□ -1.7
Upf1Q9EPU0 Gm8129-201ENSMUST00000118230 213 ntBASIC4.45□□□□□ -1.7
Upf1Q9EPU0 Gm11794-201ENSMUST00000119446 237 ntBASIC4.45□□□□□ -1.7
Upf1Q9EPU0 Gm14861-201ENSMUST00000119451 455 ntBASIC4.45□□□□□ -1.7
Upf1Q9EPU0 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Upf1Q9EPU0 Gm22383-201ENSMUST00000158188 327 ntBASIC4.45□□□□□ -1.7
Upf1Q9EPU0 Igkv4-65-201ENSMUST00000196986 358 ntBASIC4.45□□□□□ -1.7
Upf1Q9EPU0 Gm19177-201ENSMUST00000204520 613 ntBASIC4.45□□□□□ -1.7
Upf1Q9EPU0 Gm44881-201ENSMUST00000205425 367 ntBASIC4.45□□□□□ -1.7
Upf1Q9EPU0 Gm44657-201ENSMUST00000208568 450 ntBASIC4.45□□□□□ -1.7
Upf1Q9EPU0 AC163033.1-201ENSMUST00000218608 157 ntBASIC4.45□□□□□ -1.7
Upf1Q9EPU0 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC4.45□□□□□ -1.7
Upf1Q9EPU0 Snora70-201ENSMUST00000083047 137 ntBASIC4.45□□□□□ -1.7
Upf1Q9EPU0 Mir99a-201ENSMUST00000083596 65 ntBASIC4.45□□□□□ -1.7
Upf1Q9EPU0 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Upf1Q9EPU0 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.45□□□□□ -1.7
Upf1Q9EPU0 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
Upf1Q9EPU0 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Upf1Q9EPU0 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Upf1Q9EPU0 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Upf1Q9EPU0 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
Upf1Q9EPU0 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
Upf1Q9EPU0 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Upf1Q9EPU0 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Upf1Q9EPU0 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Upf1Q9EPU0 Gm14806-201ENSMUST00000116606 2110 ntBASIC4.44□□□□□ -1.7
Upf1Q9EPU0 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Upf1Q9EPU0 Gm25392-201ENSMUST00000157335 297 ntBASIC4.44□□□□□ -1.7
Upf1Q9EPU0 Gm22601-201ENSMUST00000157595 250 ntBASIC4.44□□□□□ -1.7
Upf1Q9EPU0 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC4.44□□□□□ -1.7
Upf1Q9EPU0 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Upf1Q9EPU0 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC4.44□□□□□ -1.7
Upf1Q9EPU0 Snord7-201ENSMUST00000083781 97 ntBASIC4.44□□□□□ -1.7
Upf1Q9EPU0 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC4.44□□□□□ -1.7
Upf1Q9EPU0 Neat1-201ENSMUST00000173672 20771 ntBASIC4.44□□□□□ -1.7
Upf1Q9EPU0 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Upf1Q9EPU0 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC4.44□□□□□ -1.7
Upf1Q9EPU0 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Upf1Q9EPU0 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Upf1Q9EPU0 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Upf1Q9EPU0 Gm37006-201ENSMUST00000195253 2674 ntBASIC4.43□□□□□ -1.7
Upf1Q9EPU0 Gm43883-201ENSMUST00000204002 3750 ntBASIC4.43□□□□□ -1.7
Upf1Q9EPU0 Gm13478-201ENSMUST00000118312 413 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 111 ms