Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC1.92□□□□□ -2.1
Ccdc3Q9D6Y1 Gm27753-201ENSMUST00000184742 203 ntBASIC1.92□□□□□ -2.1
Ccdc3Q9D6Y1 Gm29263-201ENSMUST00000188718 463 ntBASIC1.92□□□□□ -2.1
Ccdc3Q9D6Y1 Gm28384-201ENSMUST00000189079 463 ntBASIC1.92□□□□□ -2.1
Ccdc3Q9D6Y1 Gm7871-201ENSMUST00000195346 618 ntBASIC1.92□□□□□ -2.1
Ccdc3Q9D6Y1 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC1.92□□□□□ -2.1
Ccdc3Q9D6Y1 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC1.92□□□□□ -2.1
Ccdc3Q9D6Y1 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC1.92□□□□□ -2.1
Ccdc3Q9D6Y1 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Ccdc3Q9D6Y1 Gm23247-201ENSMUST00000083373 107 ntBASIC1.92□□□□□ -2.1
Ccdc3Q9D6Y1 Gm25008-201ENSMUST00000083809 81 ntBASIC1.92□□□□□ -2.1
Ccdc3Q9D6Y1 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Ccdc3Q9D6Y1 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Ccdc3Q9D6Y1 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC1.91□□□□□ -2.1
Ccdc3Q9D6Y1 Gm22151-201ENSMUST00000116963 58 ntBASIC1.91□□□□□ -2.1
Ccdc3Q9D6Y1 Gm15162-201ENSMUST00000119325 283 ntBASIC1.91□□□□□ -2.1
Ccdc3Q9D6Y1 Gm14748-201ENSMUST00000119819 411 ntBASIC1.91□□□□□ -2.1
Ccdc3Q9D6Y1 Gm14867-201ENSMUST00000120156 866 ntBASIC1.91□□□□□ -2.1
Ccdc3Q9D6Y1 Gm16328-201ENSMUST00000126985 196 ntBASIC1.91□□□□□ -2.1
Ccdc3Q9D6Y1 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC1.91□□□□□ -2.1
Ccdc3Q9D6Y1 Gm23469-201ENSMUST00000157131 104 ntBASIC1.91□□□□□ -2.1
Ccdc3Q9D6Y1 Gm25621-201ENSMUST00000157223 114 ntBASIC1.91□□□□□ -2.1
Ccdc3Q9D6Y1 Gm26105-201ENSMUST00000157253 190 ntBASIC1.91□□□□□ -2.1
Ccdc3Q9D6Y1 Gm25339-201ENSMUST00000157458 232 ntBASIC1.91□□□□□ -2.1
Ccdc3Q9D6Y1 Gm22727-201ENSMUST00000158090 116 ntBASIC1.91□□□□□ -2.1
Ccdc3Q9D6Y1 Gm22891-201ENSMUST00000158641 164 ntBASIC1.91□□□□□ -2.1
Ccdc3Q9D6Y1 Gm17061-201ENSMUST00000163167 499 ntBASIC1.91□□□□□ -2.1
Ccdc3Q9D6Y1 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC1.91□□□□□ -2.1
Ccdc3Q9D6Y1 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC1.91□□□□□ -2.1
Ccdc3Q9D6Y1 Mir6901-201ENSMUST00000185062 62 ntBASIC1.91□□□□□ -2.1
Ccdc3Q9D6Y1 Gm28466-201ENSMUST00000190678 659 ntBASIC1.91□□□□□ -2.1
Ccdc3Q9D6Y1 Gm37987-201ENSMUST00000194999 825 ntBASIC1.91□□□□□ -2.1
Ccdc3Q9D6Y1 Gm44308-201ENSMUST00000197080 99 ntBASIC1.91□□□□□ -2.1
Ccdc3Q9D6Y1 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC1.91□□□□□ -2.1
Ccdc3Q9D6Y1 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC1.91□□□□□ -2.1
Ccdc3Q9D6Y1 Gm19649-201ENSMUST00000201126 822 ntBASIC1.91□□□□□ -2.1
Ccdc3Q9D6Y1 Gm18242-201ENSMUST00000218455 542 ntBASIC1.91□□□□□ -2.1
Ccdc3Q9D6Y1 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.91□□□□□ -2.1
Ccdc3Q9D6Y1 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC1.91□□□□□ -2.1
Ccdc3Q9D6Y1 CT030166.2-201ENSMUST00000222021 368 ntBASIC1.91□□□□□ -2.1
Ccdc3Q9D6Y1 AC154271.1-201ENSMUST00000224780 383 ntBASIC1.91□□□□□ -2.1
Ccdc3Q9D6Y1 AC115735.3-201ENSMUST00000227757 513 ntBASIC1.91□□□□□ -2.1
Ccdc3Q9D6Y1 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Ccdc3Q9D6Y1 Gm22575-201ENSMUST00000082981 110 ntBASIC1.91□□□□□ -2.1
Ccdc3Q9D6Y1 Gm23650-201ENSMUST00000083355 70 ntBASIC1.91□□□□□ -2.1
Ccdc3Q9D6Y1 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC1.91□□□□□ -2.1
Ccdc3Q9D6Y1 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Ccdc3Q9D6Y1 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Ccdc3Q9D6Y1 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
Ccdc3Q9D6Y1 Gm45461-201ENSMUST00000211726 4535 ntBASIC1.91□□□□□ -2.1
Ccdc3Q9D6Y1 Gm14879-201ENSMUST00000117308 507 ntBASIC1.9□□□□□ -2.11
Ccdc3Q9D6Y1 Gm24911-201ENSMUST00000157292 136 ntBASIC1.9□□□□□ -2.11
Ccdc3Q9D6Y1 Gm23933-201ENSMUST00000178405 79 ntBASIC1.9□□□□□ -2.11
Ccdc3Q9D6Y1 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC1.9□□□□□ -2.11
Ccdc3Q9D6Y1 Mir8106-201ENSMUST00000184520 139 ntBASIC1.9□□□□□ -2.11
Ccdc3Q9D6Y1 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC1.9□□□□□ -2.11
Ccdc3Q9D6Y1 Gm3489-201ENSMUST00000190083 528 ntBASIC1.9□□□□□ -2.11
Ccdc3Q9D6Y1 Gm44391-201ENSMUST00000198490 93 ntBASIC1.9□□□□□ -2.11
Ccdc3Q9D6Y1 Gm43493-201ENSMUST00000199837 202 ntBASIC1.9□□□□□ -2.11
Ccdc3Q9D6Y1 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC1.9□□□□□ -2.11
Ccdc3Q9D6Y1 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC1.9□□□□□ -2.11
Ccdc3Q9D6Y1 Gm34701-202ENSMUST00000204685 360 ntBASIC1.9□□□□□ -2.11
Ccdc3Q9D6Y1 Gm29754-201ENSMUST00000206269 358 ntBASIC1.9□□□□□ -2.11
Ccdc3Q9D6Y1 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC1.9□□□□□ -2.11
Ccdc3Q9D6Y1 Gm18252-203ENSMUST00000215855 757 ntBASIC1.9□□□□□ -2.11
Ccdc3Q9D6Y1 CT030187.1-201ENSMUST00000220605 252 ntBASIC1.9□□□□□ -2.11
Ccdc3Q9D6Y1 AC137902.2-201ENSMUST00000227989 576 ntBASIC1.9□□□□□ -2.11
Ccdc3Q9D6Y1 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC1.9□□□□□ -2.11
Ccdc3Q9D6Y1 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Ccdc3Q9D6Y1 Gm26206-201ENSMUST00000082908 110 ntBASIC1.9□□□□□ -2.11
Ccdc3Q9D6Y1 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Ccdc3Q9D6Y1 Gm45262-201ENSMUST00000209917 1463 ntBASIC1.89□□□□□ -2.11
Ccdc3Q9D6Y1 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Ccdc3Q9D6Y1 Gm22543-201ENSMUST00000104347 94 ntBASIC1.89□□□□□ -2.11
Ccdc3Q9D6Y1 Gm22551-201ENSMUST00000157795 103 ntBASIC1.89□□□□□ -2.11
Ccdc3Q9D6Y1 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
Ccdc3Q9D6Y1 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Ccdc3Q9D6Y1 Igkv2-105-201ENSMUST00000196931 377 ntBASIC1.89□□□□□ -2.11
Ccdc3Q9D6Y1 Igkv1-108-201ENSMUST00000198926 298 ntBASIC1.89□□□□□ -2.11
Ccdc3Q9D6Y1 Gm31520-201ENSMUST00000203048 733 ntBASIC1.89□□□□□ -2.11
Ccdc3Q9D6Y1 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC1.89□□□□□ -2.11
Ccdc3Q9D6Y1 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC1.89□□□□□ -2.11
Ccdc3Q9D6Y1 Gm45439-201ENSMUST00000211723 359 ntBASIC1.89□□□□□ -2.11
Ccdc3Q9D6Y1 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC1.89□□□□□ -2.11
Ccdc3Q9D6Y1 CT572985.2-201ENSMUST00000220496 211 ntBASIC1.89□□□□□ -2.11
Ccdc3Q9D6Y1 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC1.89□□□□□ -2.11
Ccdc3Q9D6Y1 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Ccdc3Q9D6Y1 Gm26055-201ENSMUST00000083038 107 ntBASIC1.89□□□□□ -2.11
Ccdc3Q9D6Y1 Gm5596-201ENSMUST00000207988 2421 ntBASIC1.89□□□□□ -2.11
Ccdc3Q9D6Y1 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Ccdc3Q9D6Y1 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.88□□□□□ -2.11
Ccdc3Q9D6Y1 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Ccdc3Q9D6Y1 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Ccdc3Q9D6Y1 Gm22713-201ENSMUST00000116895 130 ntBASIC1.88□□□□□ -2.11
Ccdc3Q9D6Y1 Gm14694-201ENSMUST00000121856 282 ntBASIC1.88□□□□□ -2.11
Ccdc3Q9D6Y1 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Ccdc3Q9D6Y1 Gm22556-201ENSMUST00000157803 100 ntBASIC1.88□□□□□ -2.11
Ccdc3Q9D6Y1 Gm22483-201ENSMUST00000157986 274 ntBASIC1.88□□□□□ -2.11
Ccdc3Q9D6Y1 Gm9071-201ENSMUST00000165915 474 ntBASIC1.88□□□□□ -2.11
Ccdc3Q9D6Y1 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 131.2 ms