Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm4945-201ENSMUST00000075152 453 ntBASIC3.05□□□□□ -1.92
Vps28Q9D1C8 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Vps28Q9D1C8 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
Vps28Q9D1C8 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Vps28Q9D1C8 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
Vps28Q9D1C8 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Vps28Q9D1C8 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Vps28Q9D1C8 Gm7853-201ENSMUST00000100708 478 ntBASIC3.04□□□□□ -1.92
Vps28Q9D1C8 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Vps28Q9D1C8 Mir687-201ENSMUST00000102166 89 ntBASIC3.04□□□□□ -1.92
Vps28Q9D1C8 Gm23956-201ENSMUST00000157211 119 ntBASIC3.04□□□□□ -1.92
Vps28Q9D1C8 Gm22961-201ENSMUST00000157964 106 ntBASIC3.04□□□□□ -1.92
Vps28Q9D1C8 Gm9071-201ENSMUST00000165915 474 ntBASIC3.04□□□□□ -1.92
Vps28Q9D1C8 Gm23862-201ENSMUST00000180342 94 ntBASIC3.04□□□□□ -1.92
Vps28Q9D1C8 Gm27236-201ENSMUST00000184147 442 ntBASIC3.04□□□□□ -1.92
Vps28Q9D1C8 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC3.04□□□□□ -1.92
Vps28Q9D1C8 Gm37616-201ENSMUST00000193974 322 ntBASIC3.04□□□□□ -1.92
Vps28Q9D1C8 Ighv1-32-201ENSMUST00000195149 351 ntBASIC3.04□□□□□ -1.92
Vps28Q9D1C8 Ighv12-1-201ENSMUST00000195542 329 ntBASIC3.04□□□□□ -1.92
Vps28Q9D1C8 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.04□□□□□ -1.92
Vps28Q9D1C8 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC3.04□□□□□ -1.92
Vps28Q9D1C8 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC3.04□□□□□ -1.92
Vps28Q9D1C8 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC3.04□□□□□ -1.92
Vps28Q9D1C8 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.04□□□□□ -1.92
Vps28Q9D1C8 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC3.04□□□□□ -1.92
Vps28Q9D1C8 Gm46233-201ENSMUST00000217831 449 ntBASIC3.04□□□□□ -1.92
Vps28Q9D1C8 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Vps28Q9D1C8 Gm23727-201ENSMUST00000083352 164 ntBASIC3.04□□□□□ -1.92
Vps28Q9D1C8 Gm23042-201ENSMUST00000083866 101 ntBASIC3.04□□□□□ -1.92
Vps28Q9D1C8 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Vps28Q9D1C8 AC122887.2-201ENSMUST00000219465 1603 ntBASIC3.04□□□□□ -1.92
Vps28Q9D1C8 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.04□□□□□ -1.92
Vps28Q9D1C8 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Vps28Q9D1C8 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.03□□□□□ -1.92
Vps28Q9D1C8 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Vps28Q9D1C8 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Vps28Q9D1C8 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
Vps28Q9D1C8 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
Vps28Q9D1C8 Gm12819-201ENSMUST00000122223 629 ntBASIC3.03□□□□□ -1.92
Vps28Q9D1C8 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC3.03□□□□□ -1.92
Vps28Q9D1C8 Gm26099-201ENSMUST00000157248 109 ntBASIC3.03□□□□□ -1.92
Vps28Q9D1C8 Gm23380-201ENSMUST00000158448 103 ntBASIC3.03□□□□□ -1.92
Vps28Q9D1C8 Gm15914-201ENSMUST00000161922 309 ntBASIC3.03□□□□□ -1.92
Vps28Q9D1C8 Gm17062-201ENSMUST00000166987 461 ntBASIC3.03□□□□□ -1.92
Vps28Q9D1C8 Gm28000-201ENSMUST00000184380 85 ntBASIC3.03□□□□□ -1.92
Vps28Q9D1C8 Gm45288-201ENSMUST00000210236 151 ntBASIC3.03□□□□□ -1.92
Vps28Q9D1C8 CT025606.1-201ENSMUST00000218273 324 ntBASIC3.03□□□□□ -1.92
Vps28Q9D1C8 AC116589.1-201ENSMUST00000220634 327 ntBASIC3.03□□□□□ -1.92
Vps28Q9D1C8 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Vps28Q9D1C8 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC3.03□□□□□ -1.92
Vps28Q9D1C8 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Vps28Q9D1C8 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Vps28Q9D1C8 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Vps28Q9D1C8 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
Vps28Q9D1C8 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
Vps28Q9D1C8 n-R5s202-201ENSMUST00000104517 114 ntBASIC3.02□□□□□ -1.93
Vps28Q9D1C8 Gm11065-201ENSMUST00000111462 228 ntBASIC3.02□□□□□ -1.93
Vps28Q9D1C8 Gm15399-201ENSMUST00000118055 724 ntBASIC3.02□□□□□ -1.93
Vps28Q9D1C8 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC3.02□□□□□ -1.93
Vps28Q9D1C8 Gm23588-201ENSMUST00000157659 99 ntBASIC3.02□□□□□ -1.93
Vps28Q9D1C8 Gm25066-201ENSMUST00000158145 123 ntBASIC3.02□□□□□ -1.93
Vps28Q9D1C8 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC3.02□□□□□ -1.93
Vps28Q9D1C8 Gm9022-202ENSMUST00000183285 483 ntBASIC3.02□□□□□ -1.93
Vps28Q9D1C8 Gm27313-201ENSMUST00000183500 142 ntBASIC3.02□□□□□ -1.93
Vps28Q9D1C8 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC3.02□□□□□ -1.93
Vps28Q9D1C8 Gm6060-201ENSMUST00000188671 251 ntBASIC3.02□□□□□ -1.93
Vps28Q9D1C8 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC3.02□□□□□ -1.93
Vps28Q9D1C8 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC3.02□□□□□ -1.93
Vps28Q9D1C8 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
Vps28Q9D1C8 AL603834.1-201ENSMUST00000198372 121 ntBASIC3.02□□□□□ -1.93
Vps28Q9D1C8 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
Vps28Q9D1C8 Gm44142-201ENSMUST00000203358 311 ntBASIC3.02□□□□□ -1.93
Vps28Q9D1C8 Gm44223-201ENSMUST00000204854 114 ntBASIC3.02□□□□□ -1.93
Vps28Q9D1C8 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC3.02□□□□□ -1.93
Vps28Q9D1C8 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Vps28Q9D1C8 AC129541.1-201ENSMUST00000226940 523 ntBASIC3.02□□□□□ -1.93
Vps28Q9D1C8 AC129208.2-201ENSMUST00000228506 320 ntBASIC3.02□□□□□ -1.93
Vps28Q9D1C8 Gm9762-201ENSMUST00000036976 444 ntBASIC3.02□□□□□ -1.93
Vps28Q9D1C8 Gm26263-201ENSMUST00000083281 164 ntBASIC3.02□□□□□ -1.93
Vps28Q9D1C8 Mir184-201ENSMUST00000083662 69 ntBASIC3.02□□□□□ -1.93
Vps28Q9D1C8 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
Vps28Q9D1C8 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Vps28Q9D1C8 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Vps28Q9D1C8 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
Vps28Q9D1C8 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
Vps28Q9D1C8 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Vps28Q9D1C8 Gm22779-201ENSMUST00000104085 107 ntBASIC3.01□□□□□ -1.93
Vps28Q9D1C8 Gm13876-201ENSMUST00000118451 261 ntBASIC3.01□□□□□ -1.93
Vps28Q9D1C8 Gm12954-201ENSMUST00000118610 611 ntBASIC3.01□□□□□ -1.93
Vps28Q9D1C8 Gm23429-201ENSMUST00000122486 149 ntBASIC3.01□□□□□ -1.93
Vps28Q9D1C8 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC3.01□□□□□ -1.93
Vps28Q9D1C8 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC3.01□□□□□ -1.93
Vps28Q9D1C8 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC3.01□□□□□ -1.93
Vps28Q9D1C8 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC3.01□□□□□ -1.93
Vps28Q9D1C8 Mir7k-201ENSMUST00000184115 110 ntBASIC3.01□□□□□ -1.93
Vps28Q9D1C8 AC154296.1-201ENSMUST00000198150 67 ntBASIC3.01□□□□□ -1.93
Vps28Q9D1C8 Gm43284-201ENSMUST00000200103 253 ntBASIC3.01□□□□□ -1.93
Vps28Q9D1C8 Gm43393-201ENSMUST00000200147 194 ntBASIC3.01□□□□□ -1.93
Vps28Q9D1C8 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC3.01□□□□□ -1.93
Vps28Q9D1C8 Gm43991-201ENSMUST00000203751 274 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms